RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 SPATC1Q76KD6 591 aa25.51■■□□□ 1.67
SSSCA1-207ENST00000533115 LRRC28Q86X40 367 aaPredicted RBP25.51■■□□□ 1.67
SSSCA1-207ENST00000533115 SPICQ8N5J4 248 aa25.51■■□□□ 1.67
SSSCA1-207ENST00000533115 OR2AE1Q8NHA4 323 aa25.51■■□□□ 1.67
SSSCA1-207ENST00000533115 UTP4Q969X6 686 aaKnown RBP25.51■■□□□ 1.67
SSSCA1-207ENST00000533115 PCDHB10Q9UN67 800 aa25.51■■□□□ 1.67
SSSCA1-207ENST00000533115 C5orf63A6NC05 138 aa25.5■■□□□ 1.67
SSSCA1-207ENST00000533115 SLC15A1P46059 708 aa25.5■■□□□ 1.67
SSSCA1-207ENST00000533115 GRB2P62993 217 aaKnown RBP25.5■■□□□ 1.67
SSSCA1-207ENST00000533115 ZMYND11Q15326 602 aa25.5■■□□□ 1.67
SSSCA1-207ENST00000533115 GLYATL3Q5SZD4 288 aa25.5■■□□□ 1.67
SSSCA1-207ENST00000533115 SHFQ7M4L6 423 aa25.5■■□□□ 1.67
SSSCA1-207ENST00000533115 TIGD4Q8IY51 512 aa25.5■■□□□ 1.67
SSSCA1-207ENST00000533115 SPATA3Q8NHX4 192 aa25.5■■□□□ 1.67
SSSCA1-207ENST00000533115 ZNF420Q8TAQ5 688 aaPredicted RBP25.5■■□□□ 1.67
SSSCA1-207ENST00000533115 DNAJC9Q8WXX5 260 aa25.5■■□□□ 1.67
SSSCA1-207ENST00000533115 REPIN1Q9BWE0 567 aaKnown RBP25.5■■□□□ 1.67
SSSCA1-207ENST00000533115 MMADHCQ9H3L0 296 aaPredicted RBP25.5■■□□□ 1.67
SSSCA1-207ENST00000533115 CD300LBA8K4G0 201 aa25.49■■□□□ 1.67
SSSCA1-207ENST00000533115 SLC2A1P11166 492 aa25.49■■□□□ 1.67
SSSCA1-207ENST00000533115 KLHL36Q8N4N3 616 aa25.49■■□□□ 1.67
SSSCA1-207ENST00000533115 RNF133Q8WVZ7 376 aa25.49■■□□□ 1.67
SSSCA1-207ENST00000533115 ABHD6Q9BV23 337 aa25.49■■□□□ 1.67
SSSCA1-207ENST00000533115 TOR3AQ9H497 397 aa25.49■■□□□ 1.67
SSSCA1-207ENST00000533115 SLC25A19Q9HC21 320 aa25.49■■□□□ 1.67
SSSCA1-207ENST00000533115 KIF17Q9P2E2 1029 aa25.49■■□□□ 1.67
SSSCA1-207ENST00000533115 N6AMT1Q9Y5N5 214 aa25.49■■□□□ 1.67
SSSCA1-207ENST00000533115 A0A0G2JMP0 313 aa25.48■■□□□ 1.67
SSSCA1-207ENST00000533115 IGHV3-64DA0A0J9YX35 117 aa25.48■■□□□ 1.67
SSSCA1-207ENST00000533115 A0A0X1KG70 313 aa25.48■■□□□ 1.67
SSSCA1-207ENST00000533115 TMEM236Q5W0B7 351 aa25.48■■□□□ 1.67
SSSCA1-207ENST00000533115 MOGAT3Q86VF5 341 aa25.48■■□□□ 1.67
SSSCA1-207ENST00000533115 CPOQ8IVL8 374 aa25.48■■□□□ 1.67
SSSCA1-207ENST00000533115 CELF2-AS1Q8N7Q2 184 aa25.48■■□□□ 1.67
SSSCA1-207ENST00000533115 OR4M2Q8NGB6 313 aa25.48■■□□□ 1.67
SSSCA1-207ENST00000533115 ZMYND19Q96E35 227 aaPredicted RBP25.48■■□□□ 1.67
SSSCA1-207ENST00000533115 PLEKHA8Q96JA3 519 aa25.48■■□□□ 1.67
SSSCA1-207ENST00000533115 TEX12Q9BXU0 123 aa25.48■■□□□ 1.67
SSSCA1-207ENST00000533115 SLC22A4Q9H015 551 aa25.48■■□□□ 1.67
SSSCA1-207ENST00000533115 PATZ1Q9HBE1 687 aaKnown RBP25.48■■□□□ 1.67
SSSCA1-207ENST00000533115 PAPOLBQ9NRJ5 636 aaKnown RBP25.48■■□□□ 1.67
SSSCA1-207ENST00000533115 GGT3PA6NGU5 568 aa25.47■■□□□ 1.67
SSSCA1-207ENST00000533115 PRODHO43272 600 aa25.47■■□□□ 1.67
SSSCA1-207ENST00000533115 HSD11B1P28845 292 aa25.47■■□□□ 1.67
SSSCA1-207ENST00000533115 MDH2P40926 338 aaKnown RBP25.47■■□□□ 1.67
SSSCA1-207ENST00000533115 CX3CR1P49238 355 aa25.47■■□□□ 1.67
SSSCA1-207ENST00000533115 LCN2P80188 198 aa25.47■■□□□ 1.67
SSSCA1-207ENST00000533115 MAB21L1Q13394 359 aa25.47■■□□□ 1.67
SSSCA1-207ENST00000533115 ZNF181Q2M3W8 571 aa25.47■■□□□ 1.67
SSSCA1-207ENST00000533115 FAHD1Q6P587 224 aa25.47■■□□□ 1.67
SSSCA1-207ENST00000533115 OR5K1Q8NHB7 308 aa25.47■■□□□ 1.67
SSSCA1-207ENST00000533115 METRNQ9UJH8 293 aa25.47■■□□□ 1.67
SSSCA1-207ENST00000533115 XRCC2O43543 280 aa25.46■■□□□ 1.67
SSSCA1-207ENST00000533115 CYB5R3P00387 301 aaPredicted RBP25.46■■□□□ 1.67
SSSCA1-207ENST00000533115 CA6P23280 308 aa25.46■■□□□ 1.67
SSSCA1-207ENST00000533115 CD200P41217 278 aa25.46■■□□□ 1.67
SSSCA1-207ENST00000533115 GATA4P43694 442 aa25.46■■□□□ 1.67
SSSCA1-207ENST00000533115 DAPP51397 102 aa25.46■■□□□ 1.67
SSSCA1-207ENST00000533115 RAD23AP54725 363 aa25.46■■□□□ 1.67
SSSCA1-207ENST00000533115 KLHL12Q53G59 568 aa25.46■■□□□ 1.67
SSSCA1-207ENST00000533115 DCAF12L2Q5VW00 463 aa25.46■■□□□ 1.67
SSSCA1-207ENST00000533115 RHOUQ7L0Q8 258 aa25.46■■□□□ 1.67
SSSCA1-207ENST00000533115 MUC20Q8N307 709 aaPredicted RBP25.46■■□□□ 1.67
SSSCA1-207ENST00000533115 AMELYQ99218 206 aa25.46■■□□□ 1.67
SSSCA1-207ENST00000533115 OPA3Q9H6K4 179 aa25.46■■□□□ 1.67
SSSCA1-207ENST00000533115 METTL17Q9H7H0 456 aaPredicted RBP25.46■■□□□ 1.67
SSSCA1-207ENST00000533115 NOP16Q9Y3C1 178 aaKnown RBP25.46■■□□□ 1.67
SSSCA1-207ENST00000533115 LRRC30A6NM36 301 aa25.45■■□□□ 1.66
SSSCA1-207ENST00000533115 J3QLI3 93 aa25.45■■□□□ 1.66
SSSCA1-207ENST00000533115 FOXH1O75593 365 aa25.45■■□□□ 1.66
SSSCA1-207ENST00000533115 AVPP01185 164 aa25.45■■□□□ 1.66
SSSCA1-207ENST00000533115 APOC1P02654 83 aa25.45■■□□□ 1.66
SSSCA1-207ENST00000533115 GATA3P23771 443 aa25.45■■□□□ 1.66
SSSCA1-207ENST00000533115 ZFP36P26651 326 aaKnown RBP25.45■■□□□ 1.66
SSSCA1-207ENST00000533115 PMELP40967 661 aa25.45■■□□□ 1.66
SSSCA1-207ENST00000533115 CRISP1P54107 249 aa25.45■■□□□ 1.66
SSSCA1-207ENST00000533115 OR8G1Q15617 311 aa25.45■■□□□ 1.66
SSSCA1-207ENST00000533115 ATP6AP1Q15904 470 aa25.45■■□□□ 1.66
SSSCA1-207ENST00000533115 SLC35D3Q5M8T2 416 aa25.45■■□□□ 1.66
SSSCA1-207ENST00000533115 C1orf146Q5VVC0 180 aa25.45■■□□□ 1.66
SSSCA1-207ENST00000533115 C1orf229Q6ZS94 237 aaPredicted RBP25.45■■□□□ 1.66
SSSCA1-207ENST00000533115 PHC2Q8IXK0 858 aa25.45■■□□□ 1.66
SSSCA1-207ENST00000533115 RFLNBQ8N5W9 214 aa25.45■■□□□ 1.66
SSSCA1-207ENST00000533115 TEX29Q8N6K0 151 aa25.45■■□□□ 1.66
SSSCA1-207ENST00000533115 TMPRSS13Q9BYE2 586 aa25.45■■□□□ 1.66
SSSCA1-207ENST00000533115 SP140LQ9H930 580 aa25.45■■□□□ 1.66
SSSCA1-207ENST00000533115 TBX1O43435 398 aa25.44■■□□□ 1.66
SSSCA1-207ENST00000533115 GMDSO60547 372 aa25.44■■□□□ 1.66
SSSCA1-207ENST00000533115 SELENOFO60613 162 aa25.44■■□□□ 1.66
SSSCA1-207ENST00000533115 ANXA2P07355 339 aaKnown RBP25.44■■□□□ 1.66
SSSCA1-207ENST00000533115 OPRL1P41146 370 aa25.44■■□□□ 1.66
SSSCA1-207ENST00000533115 PARP8Q8N3A8 854 aa25.44■■□□□ 1.66
SSSCA1-207ENST00000533115 BBS1Q8NFJ9 593 aa25.44■■□□□ 1.66
SSSCA1-207ENST00000533115 OTOSQ8NHW6 89 aa25.44■■□□□ 1.66
SSSCA1-207ENST00000533115 ERGIC1Q969X5 290 aa25.44■■□□□ 1.66
SSSCA1-207ENST00000533115 SPSB4Q96A44 273 aa25.44■■□□□ 1.66
SSSCA1-207ENST00000533115 TVP23BQ9NYZ1 205 aa25.44■■□□□ 1.66
SSSCA1-207ENST00000533115 MRPL15Q9P015 296 aaKnown RBP25.44■■□□□ 1.66
SSSCA1-207ENST00000533115 WNK2Q9Y3S1 2297 aa25.44■■□□□ 1.66
SSSCA1-207ENST00000533115 F5H0A9 414 aaPredicted RBP25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms