RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 PTP4A1Q93096 173 aa14.15□□□□□ -0.14
PKP3-209ENST00000533069 HAVCR1Q96D42 359 aa14.15□□□□□ -0.14
PKP3-209ENST00000533069 CMBLQ96DG6 245 aa14.15□□□□□ -0.14
PKP3-209ENST00000533069 TIMD4Q96H15 378 aa14.15□□□□□ -0.14
PKP3-209ENST00000533069 DDOQ99489 341 aa14.15□□□□□ -0.14
PKP3-209ENST00000533069 ATF6BQ99941 703 aa14.15□□□□□ -0.14
PKP3-209ENST00000533069 POFUT1Q9H488 388 aa14.15□□□□□ -0.14
PKP3-209ENST00000533069 TPRKBQ9Y3C4 175 aa14.15□□□□□ -0.14
PKP3-209ENST00000533069 RPL36Q9Y3U8 105 aaKnown RBP14.15□□□□□ -0.14
PKP3-209ENST00000533069 KIAA1324LA8MWY0 1029 aaPredicted RBP14.14□□□□□ -0.15
PKP3-209ENST00000533069 B4DSR2 109 aa14.14□□□□□ -0.15
PKP3-209ENST00000533069 MRPS14O60783 128 aaKnown RBP14.14□□□□□ -0.15
PKP3-209ENST00000533069 DBHP09172 617 aa14.14□□□□□ -0.15
PKP3-209ENST00000533069 PCMT1P22061 227 aa14.14□□□□□ -0.15
PKP3-209ENST00000533069 TNFSF4P23510 183 aa14.14□□□□□ -0.15
PKP3-209ENST00000533069 SLC3A1Q07837 685 aa14.14□□□□□ -0.15
PKP3-209ENST00000533069 KRTAP27-1Q3LI81 207 aa14.14□□□□□ -0.15
PKP3-209ENST00000533069 ZNF362Q5T0B9 420 aaPredicted RBP14.14□□□□□ -0.15
PKP3-209ENST00000533069 FBXW12Q6X9E4 464 aa14.14□□□□□ -0.15
PKP3-209ENST00000533069 CFAP77Q6ZQR2 320 aa14.14□□□□□ -0.15
PKP3-209ENST00000533069 LINC00346Q8IVM7 164 aa14.14□□□□□ -0.15
PKP3-209ENST00000533069 CYB561A3Q8NBI2 242 aa14.14□□□□□ -0.15
PKP3-209ENST00000533069 IL4I1Q96RQ9 567 aa14.14□□□□□ -0.15
PKP3-209ENST00000533069 MSL2Q9HCI7 577 aa14.14□□□□□ -0.15
PKP3-209ENST00000533069 MRPL22Q9NWU5 206 aaKnown RBP14.14□□□□□ -0.15
PKP3-209ENST00000533069 WARS2Q9UGM6 360 aaKnown RBP14.14□□□□□ -0.15
PKP3-209ENST00000533069 MYRFQ9Y2G1 1151 aa14.14□□□□□ -0.15
PKP3-209ENST00000533069 PYCR1P32322 319 aa14.13□□□□□ -0.15
PKP3-209ENST00000533069 DVL1P1P54792 670 aaPredicted RBP14.13□□□□□ -0.15
PKP3-209ENST00000533069 GABARAPL2P60520 117 aa14.13□□□□□ -0.15
PKP3-209ENST00000533069 TNFAIP6P98066 277 aaPredicted RBP14.13□□□□□ -0.15
PKP3-209ENST00000533069 POU4F2Q12837 409 aa14.13□□□□□ -0.15
PKP3-209ENST00000533069 CRMP1Q14194 572 aa14.13□□□□□ -0.15
PKP3-209ENST00000533069 KCTD21Q4G0X4 260 aa14.13□□□□□ -0.15
PKP3-209ENST00000533069 FAM120AOSQ5T036 256 aa14.13□□□□□ -0.15
PKP3-209ENST00000533069 AADACL4Q5VUY2 407 aa14.13□□□□□ -0.15
PKP3-209ENST00000533069 RAB1CQ92928 201 aa14.13□□□□□ -0.15
PKP3-209ENST00000533069 MYCBPQ99417 103 aaPredicted RBP14.13□□□□□ -0.15
PKP3-209ENST00000533069 NMNAT2Q9BZQ4 307 aa14.13□□□□□ -0.15
PKP3-209ENST00000533069 NARFLQ9H6Q4 476 aa14.13□□□□□ -0.15
PKP3-209ENST00000533069 HAO2Q9NYQ3 351 aa14.13□□□□□ -0.15
PKP3-209ENST00000533069 UBAP1Q9NZ09 502 aa14.13□□□□□ -0.15
PKP3-209ENST00000533069 PTTG3PQ9NZH4 202 aa14.13□□□□□ -0.15
PKP3-209ENST00000533069 CNOT2Q9NZN8 540 aaKnown RBP14.13□□□□□ -0.15
PKP3-209ENST00000533069 EFCAB10A6NFE3 127 aa14.12□□□□□ -0.15
PKP3-209ENST00000533069 WBP4O75554 376 aaKnown RBP14.12□□□□□ -0.15
PKP3-209ENST00000533069 PIPP12273 146 aaPredicted RBP14.12□□□□□ -0.15
PKP3-209ENST00000533069 TNFRSF1AP19438 455 aa14.12□□□□□ -0.15
PKP3-209ENST00000533069 HTR1FP30939 366 aa14.12□□□□□ -0.15
PKP3-209ENST00000533069 FMO3P31513 532 aa14.12□□□□□ -0.15
PKP3-209ENST00000533069 DBPQ10586 325 aaPredicted RBP14.12□□□□□ -0.15
PKP3-209ENST00000533069 KLHL22Q53GT1 634 aa14.12□□□□□ -0.15
PKP3-209ENST00000533069 COLCA1Q6ZS62 124 aa14.12□□□□□ -0.15
PKP3-209ENST00000533069 GLCCI1Q86VQ1 547 aa14.12□□□□□ -0.15
PKP3-209ENST00000533069 CPOQ8IVL8 374 aa14.12□□□□□ -0.15
PKP3-209ENST00000533069 OR9Q1Q8NGQ5 310 aa14.12□□□□□ -0.15
PKP3-209ENST00000533069 CNIH3Q8TBE1 160 aa14.12□□□□□ -0.15
PKP3-209ENST00000533069 APH1BQ8WW43 257 aa14.12□□□□□ -0.15
PKP3-209ENST00000533069 CCL17Q92583 94 aa14.12□□□□□ -0.15
PKP3-209ENST00000533069 SPTSSAQ969W0 71 aa14.12□□□□□ -0.15
PKP3-209ENST00000533069 ZNF582Q96NG8 517 aaPredicted RBP14.12□□□□□ -0.15
PKP3-209ENST00000533069 C1QTNF5Q9BXJ0 243 aa14.12□□□□□ -0.15
PKP3-209ENST00000533069 PNRC2Q9NPJ4 139 aaKnown RBP14.12□□□□□ -0.15
PKP3-209ENST00000533069 WIPI2Q9Y4P8 454 aa14.12□□□□□ -0.15
PKP3-209ENST00000533069 PCDHGB1Q9Y5G3 927 aa14.12□□□□□ -0.15
PKP3-209ENST00000533069 SLC1A7O00341 560 aa14.11□□□□□ -0.15
PKP3-209ENST00000533069 WNT9BO14905 357 aa14.11□□□□□ -0.15
PKP3-209ENST00000533069 ACSM4P0C7M7 580 aa14.11□□□□□ -0.15
PKP3-209ENST00000533069 SELEP16581 610 aa14.11□□□□□ -0.15
PKP3-209ENST00000533069 SPI1P17947 270 aa14.11□□□□□ -0.15
PKP3-209ENST00000533069 SRD5A1P18405 259 aa14.11□□□□□ -0.15
PKP3-209ENST00000533069 THBS2P35442 1172 aa14.11□□□□□ -0.15
PKP3-209ENST00000533069 TPTEP56180 551 aa14.11□□□□□ -0.15
PKP3-209ENST00000533069 LMO4P61968 165 aa14.11□□□□□ -0.15
PKP3-209ENST00000533069 MVKQ03426 396 aa14.11□□□□□ -0.15
PKP3-209ENST00000533069 RAB40BQ12829 278 aa14.11□□□□□ -0.15
PKP3-209ENST00000533069 CHD3Q12873 2000 aaKnown RBP14.11□□□□□ -0.15
PKP3-209ENST00000533069 RSPO1Q2MKA7 263 aaPredicted RBP14.11□□□□□ -0.15
PKP3-209ENST00000533069 CR1LQ2VPA4 569 aa14.11□□□□□ -0.15
PKP3-209ENST00000533069 AVPI1Q5T686 147 aa14.11□□□□□ -0.15
PKP3-209ENST00000533069 PLBD1Q6P4A8 553 aa14.11□□□□□ -0.15
PKP3-209ENST00000533069 Q6ZR03 302 aa14.11□□□□□ -0.15
PKP3-209ENST00000533069 MEPCEQ7L2J0 689 aaKnown RBP14.11□□□□□ -0.15
PKP3-209ENST00000533069 PEG10Q86TG7 708 aaKnown RBP14.11□□□□□ -0.15
PKP3-209ENST00000533069 OR2Z1Q8NG97 314 aa14.11□□□□□ -0.15
PKP3-209ENST00000533069 RAB39BQ96DA2 213 aa14.11□□□□□ -0.15
PKP3-209ENST00000533069 MAP6Q96JE9 813 aa14.11□□□□□ -0.15
PKP3-209ENST00000533069 HCAR1Q9BXC0 346 aa14.11□□□□□ -0.15
PKP3-209ENST00000533069 DDX28Q9NUL7 540 aaKnown RBP14.11□□□□□ -0.15
PKP3-209ENST00000533069 MRPS18AQ9NVS2 196 aaKnown RBP14.11□□□□□ -0.15
PKP3-209ENST00000533069 TREM2Q9NZC2 230 aa14.11□□□□□ -0.15
PKP3-209ENST00000533069 IL19Q9UHD0 177 aa14.11□□□□□ -0.15
PKP3-209ENST00000533069 CACNG2Q9Y698 323 aa14.11□□□□□ -0.15
PKP3-209ENST00000533069 COMMD3-BMI1R4GMX3 469 aa14.11□□□□□ -0.15
PKP3-209ENST00000533069 MAGEA13PA6NCF6 341 aa14.1□□□□□ -0.15
PKP3-209ENST00000533069 TVP23AA6NH52 213 aa14.1□□□□□ -0.15
PKP3-209ENST00000533069 F5H5K5 113 aa14.1□□□□□ -0.15
PKP3-209ENST00000533069 ENTPD6O75354 484 aa14.1□□□□□ -0.15
PKP3-209ENST00000533069 GLCEO94923 617 aa14.1□□□□□ -0.15
PKP3-209ENST00000533069 MSMBP08118 114 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms