RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 WNT1P04628 370 aa13.75□□□□□ -0.21
PCDHA3-202ENST00000532566 CCL11P51671 97 aa13.75□□□□□ -0.21
PCDHA3-202ENST00000532566 RAB31Q13636 194 aa13.75□□□□□ -0.21
PCDHA3-202ENST00000532566 MIXL1Q9H2W2 232 aa13.75□□□□□ -0.21
PCDHA3-202ENST00000532566 UCK1Q9HA47 277 aa13.75□□□□□ -0.21
PCDHA3-202ENST00000532566 PYCARD-AS1I3L0S3 204 aa13.75□□□□□ -0.21
PCDHA3-202ENST00000532566 IL5P05113 134 aa13.75□□□□□ -0.21
PCDHA3-202ENST00000532566 MGMTP16455 207 aa13.75□□□□□ -0.21
PCDHA3-202ENST00000532566 CD300CQ08708 224 aa13.75□□□□□ -0.21
PCDHA3-202ENST00000532566 TBC1D28Q2M2D7 210 aa13.75□□□□□ -0.21
PCDHA3-202ENST00000532566 PP6455Q8WZ26 134 aa13.75□□□□□ -0.21
PCDHA3-202ENST00000532566 ZPBPQ9BS86 351 aa13.75□□□□□ -0.21
PCDHA3-202ENST00000532566 A0A0G2JMZ2 1700 aa13.75□□□□□ -0.21
PCDHA3-202ENST00000532566 A0A1W2PQD3 144 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 PLPP3O14495 311 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 XRCC2O43543 280 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 TMEM229BQ8NBD8 167 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 OR4D9Q8NGE8 314 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 OR4D6Q8NGJ1 314 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 NUBPLQ8TB37 319 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 KCNJ15Q99712 375 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 ZNF2Q9BSG1 426 aaPredicted RBP13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 MTFP1Q9UDX5 166 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 D6RAR5 112 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 B4GALT1P15291 398 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 SERPINF1P36955 418 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 C1QL3Q5VWW1 255 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 ACOT7LQ6ZUV0 252 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 D2HGDHQ8N465 521 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 OR2V1Q8NHB1 315 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 MARCH1Q8TCQ1 289 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 EMG1Q92979 244 aaKnown RBP13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 ALKBH3Q96Q83 286 aaPredicted RBP13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 CNTNAP3Q9BZ76 1288 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 MRM2Q9UI43 246 aaKnown RBP13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 RGS11O94810 467 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 NDUFB6O95139 128 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 PSMB6P28072 239 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 GABRA2P47869 451 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 SLC10A1Q14973 349 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 LHFPL2Q6ZUX7 228 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 DTWD2Q8NBA8 298 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 SUMF2Q8NBJ7 301 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 DUSP18Q8NEJ0 188 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 OR52B4Q8NGK2 314 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 REEP6Q96HR9 211 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 GNRHR2Q96P88 292 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 ALPK2Q86TB3 2170 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 H7C1Q1 480 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 TGM6O95932 706 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 FAHP16930 419 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 OPRM1P35372 400 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 PWWP2BQ6NUJ5 590 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 ANKRD16Q6P6B7 361 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 TFAP2EQ6VUC0 442 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 COMTD1Q86VU5 262 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 PLPP5Q8NEB5 264 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 UPRTQ96BW1 309 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 B3GAT1Q9P2W7 334 aa13.74□□□□□ -0.21
PCDHA3-202ENST00000532566 OR6C6A6NF89 314 aa13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 CEBPZOSA8MTT3 80 aa13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 PI3P19957 117 aa13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 LIMS1P48059 325 aa13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 PPT1P50897 306 aa13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 FUT5Q11128 374 aa13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 PAN3Q58A45 887 aaKnown RBP13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 GLDNQ6ZMI3 551 aaPredicted RBP13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 BATF2Q8N1L9 274 aa13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 CPNE4Q96A23 557 aaPredicted RBP13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 GPR160Q9UJ42 338 aa13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 CSAG2Q9Y5P2 127 aa13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 EXOSC2Q13868 293 aaKnown RBP13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 DPPA2Q7Z7J5 298 aa13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 ARRDC1-AS1Q9H2J1 176 aa13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 GNG12Q9UBI6 72 aa13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 PILRAQ9UKJ1 303 aa13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 PATJQ8NI35 1801 aa13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 SNRPNP63162 240 aaKnown RBP13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 SKP2Q13309 424 aa13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 CEACAM16Q2WEN9 425 aa13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 MESTQ5EB52 335 aa13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 PTPMT1Q8WUK0 201 aaPredicted RBP13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 ROBO4Q8WZ75 1007 aa13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 ZNF285Q96NJ3 590 aa13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 MTCH2Q9Y6C9 303 aa13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 ARGFXA6NJG6 315 aa13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 TNFSF12O43508 249 aa13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 CNR1P21554 472 aa13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 BCKDHBP21953 392 aa13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 THBS4P35443 961 aa13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 NLRC3Q7RTR2 1065 aa13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 CRIPAKQ8N1N5 446 aa13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 HSD17B11Q8NBQ5 300 aa13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 DTX4Q9Y2E6 619 aa13.73□□□□□ -0.21
PCDHA3-202ENST00000532566 A0A096LPE4 126 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 A0A1W2PPZ6 126 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 B8ZZF3 427 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 TOR1AO14656 332 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 EPPINO95925 133 aa13.72□□□□□ -0.21
PCDHA3-202ENST00000532566 CHATP28329 748 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms