RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 PSMD9O00233 223 aa10.78□□□□□ -0.68
COPB1-208ENST00000532088 XRCC2O43543 280 aa10.78□□□□□ -0.68
COPB1-208ENST00000532088 MT-ND2P03891 347 aa10.78□□□□□ -0.68
COPB1-208ENST00000532088 CD1AP06126 327 aa10.78□□□□□ -0.68
COPB1-208ENST00000532088 CCL2P13500 99 aa10.78□□□□□ -0.68
COPB1-208ENST00000532088 ZNF19P17023 458 aa10.78□□□□□ -0.68
COPB1-208ENST00000532088 CCNOP22674 350 aa10.78□□□□□ -0.68
COPB1-208ENST00000532088 CFL1P23528 166 aaKnown RBP10.78□□□□□ -0.68
COPB1-208ENST00000532088 PRKXP51817 358 aa10.78□□□□□ -0.68
COPB1-208ENST00000532088 OR12D2P58182 307 aa10.78□□□□□ -0.68
COPB1-208ENST00000532088 ZNF121P58317 390 aaPredicted RBP10.78□□□□□ -0.68
COPB1-208ENST00000532088 HGFACQ04756 655 aa10.78□□□□□ -0.68
COPB1-208ENST00000532088 TP53I3Q53FA7 332 aa10.78□□□□□ -0.68
COPB1-208ENST00000532088 SLC22A25Q6T423 547 aa10.78□□□□□ -0.68
COPB1-208ENST00000532088 SPATC1Q76KD6 591 aa10.78□□□□□ -0.68
COPB1-208ENST00000532088 SPARTQ8N0X7 666 aa10.78□□□□□ -0.68
COPB1-208ENST00000532088 CCDC54Q8NEL0 328 aa10.78□□□□□ -0.68
COPB1-208ENST00000532088 SPRYD4Q8WW59 207 aaPredicted RBP10.78□□□□□ -0.68
COPB1-208ENST00000532088 SLC7A6Q92536 515 aa10.78□□□□□ -0.68
COPB1-208ENST00000532088 SGCDQ92629 289 aa10.78□□□□□ -0.68
COPB1-208ENST00000532088 FCGR1BQ92637 280 aa10.78□□□□□ -0.68
COPB1-208ENST00000532088 RORBQ92753 470 aa10.78□□□□□ -0.68
COPB1-208ENST00000532088 PIK3IP1Q96FE7 263 aa10.78□□□□□ -0.68
COPB1-208ENST00000532088 SSBP4Q9BWG4 385 aaPredicted RBP10.78□□□□□ -0.68
COPB1-208ENST00000532088 CCDC90BQ9GZT6 254 aa10.78□□□□□ -0.68
COPB1-208ENST00000532088 TRIM36Q9NQ86 728 aa10.78□□□□□ -0.68
COPB1-208ENST00000532088 ACOXLQ9NUZ1 547 aa10.78□□□□□ -0.68
COPB1-208ENST00000532088 BABAM2Q9NXR7 383 aa10.78□□□□□ -0.68
COPB1-208ENST00000532088 PLEKHB1Q9UF11 243 aaPredicted RBP10.78□□□□□ -0.68
COPB1-208ENST00000532088 LSM2Q9Y333 95 aaKnown RBP10.78□□□□□ -0.68
COPB1-208ENST00000532088 GRIP1Q9Y3R0 1128 aa10.78□□□□□ -0.68
COPB1-208ENST00000532088 FLNCQ14315 2725 aa10.77□□□□□ -0.69
COPB1-208ENST00000532088 TRIM64CA6NLI5 447 aa10.77□□□□□ -0.69
COPB1-208ENST00000532088 VSTM5A8MXK1 200 aa10.77□□□□□ -0.69
COPB1-208ENST00000532088 ATP6V1G2-DDX39BF2Z307 99 aa10.77□□□□□ -0.69
COPB1-208ENST00000532088 LOC110117498-PIK3R3F6TDL0 507 aa10.77□□□□□ -0.69
COPB1-208ENST00000532088 LCATP04180 440 aa10.77□□□□□ -0.69
COPB1-208ENST00000532088 ANXA2P07355 339 aaKnown RBP10.77□□□□□ -0.69
COPB1-208ENST00000532088 SLC6A9P48067 706 aa10.77□□□□□ -0.69
COPB1-208ENST00000532088 MALLQ13021 153 aa10.77□□□□□ -0.69
COPB1-208ENST00000532088 SPHARQ15513 63 aa10.77□□□□□ -0.69
COPB1-208ENST00000532088 ZNF672Q499Z4 452 aaPredicted RBP10.77□□□□□ -0.69
COPB1-208ENST00000532088 OR2G6Q5TZ20 316 aa10.77□□□□□ -0.69
COPB1-208ENST00000532088 RPL22L1Q6P5R6 122 aaKnown RBP10.77□□□□□ -0.69
COPB1-208ENST00000532088 ZNF367Q7RTV3 350 aa10.77□□□□□ -0.69
COPB1-208ENST00000532088 CATSPERDQ86XM0 798 aa10.77□□□□□ -0.69
COPB1-208ENST00000532088 SPSB4Q96A44 273 aa10.77□□□□□ -0.69
COPB1-208ENST00000532088 TTTY10Q9BZA0 68 aa10.77□□□□□ -0.69
COPB1-208ENST00000532088 OR10A2Q9H208 303 aa10.77□□□□□ -0.69
COPB1-208ENST00000532088 ISG20L2Q9H9L3 353 aaKnown RBP10.77□□□□□ -0.69
COPB1-208ENST00000532088 ACOT13Q9NPJ3 140 aa10.77□□□□□ -0.69
COPB1-208ENST00000532088 G6PC2Q9NQR9 355 aa10.77□□□□□ -0.69
COPB1-208ENST00000532088 OR52A1Q9UKL2 312 aa10.77□□□□□ -0.69
COPB1-208ENST00000532088 MAGEA13PA6NCF6 341 aa10.76□□□□□ -0.69
COPB1-208ENST00000532088 MAGEB4O15481 346 aaPredicted RBP10.76□□□□□ -0.69
COPB1-208ENST00000532088 OGG1O15527 345 aa10.76□□□□□ -0.69
COPB1-208ENST00000532088 CTAG2O75638 210 aa10.76□□□□□ -0.69
COPB1-208ENST00000532088 PNPP00491 289 aa10.76□□□□□ -0.69
COPB1-208ENST00000532088 IGLV3-1P01715 115 aa10.76□□□□□ -0.69
COPB1-208ENST00000532088 ISG15P05161 165 aa10.76□□□□□ -0.69
COPB1-208ENST00000532088 ATP6V1B1P15313 513 aa10.76□□□□□ -0.69
COPB1-208ENST00000532088 PCMT1P22061 227 aa10.76□□□□□ -0.69
COPB1-208ENST00000532088 EVX1P49640 407 aa10.76□□□□□ -0.69
COPB1-208ENST00000532088 PPP1CBP62140 327 aa10.76□□□□□ -0.69
COPB1-208ENST00000532088 TLE4Q04727 773 aa10.76□□□□□ -0.69
COPB1-208ENST00000532088 EMX1Q04741 257 aaPredicted RBP10.76□□□□□ -0.69
COPB1-208ENST00000532088 SPOCK1Q08629 439 aa10.76□□□□□ -0.69
COPB1-208ENST00000532088 SNTB2Q13425 540 aaKnown RBP10.76□□□□□ -0.69
COPB1-208ENST00000532088 GPR50Q13585 617 aa10.76□□□□□ -0.69
COPB1-208ENST00000532088 ALKBH1Q13686 389 aaKnown RBP10.76□□□□□ -0.69
COPB1-208ENST00000532088 UBE2UQ5VVX9 321 aa10.76□□□□□ -0.69
COPB1-208ENST00000532088 MBNL2Q5VZF2 373 aaKnown RBP10.76□□□□□ -0.69
COPB1-208ENST00000532088 FBXW12Q6X9E4 464 aa10.76□□□□□ -0.69
COPB1-208ENST00000532088 ZNF704Q6ZNC4 412 aaPredicted RBP10.76□□□□□ -0.69
COPB1-208ENST00000532088 Q6ZSR3 168 aa10.76□□□□□ -0.69
COPB1-208ENST00000532088 RFPL4BQ6ZWI9 263 aa10.76□□□□□ -0.69
COPB1-208ENST00000532088 ELMOD2Q8IZ81 293 aa10.76□□□□□ -0.69
COPB1-208ENST00000532088 ZNF101Q8IZC7 436 aa10.76□□□□□ -0.69
COPB1-208ENST00000532088 TSPAN14Q8NG11 270 aa10.76□□□□□ -0.69
COPB1-208ENST00000532088 OR1J1Q8NGS3 322 aa10.76□□□□□ -0.69
COPB1-208ENST00000532088 OR2G2Q8NGZ5 317 aa10.76□□□□□ -0.69
COPB1-208ENST00000532088 ABHD4Q8TB40 342 aa10.76□□□□□ -0.69
COPB1-208ENST00000532088 AKAP1Q92667 903 aaKnown RBP eCLIP10.76□□□□□ -0.69
COPB1-208ENST00000532088 PGAM5Q96HS1 289 aa10.76□□□□□ -0.69
COPB1-208ENST00000532088 MEGF10Q96KG7 1140 aa10.76□□□□□ -0.69
COPB1-208ENST00000532088 PBOV1Q9GZY1 135 aa10.76□□□□□ -0.69
COPB1-208ENST00000532088 CA10Q9NS85 328 aa10.76□□□□□ -0.69
COPB1-208ENST00000532088 FBXO9Q9UK97 447 aaPredicted RBP10.76□□□□□ -0.69
COPB1-208ENST00000532088 ADGRG4Q8IZF6 3080 aa10.76□□□□□ -0.69
COPB1-208ENST00000532088 HELZ2Q9BYK8 2649 aaKnown RBP10.75□□□□□ -0.69
COPB1-208ENST00000532088 PRR14LQ5THK1 2151 aa10.75□□□□□ -0.69
COPB1-208ENST00000532088 LOC390937A0A1W2PQ73 354 aa10.75□□□□□ -0.69
COPB1-208ENST00000532088 TMEM212A6NML5 194 aa10.75□□□□□ -0.69
COPB1-208ENST00000532088 RPP14O95059 124 aaKnown RBP10.75□□□□□ -0.69
COPB1-208ENST00000532088 NGFP01138 241 aa10.75□□□□□ -0.69
COPB1-208ENST00000532088 TTRP02766 147 aa10.75□□□□□ -0.69
COPB1-208ENST00000532088 UBCP0CG48 685 aaKnown RBP10.75□□□□□ -0.69
COPB1-208ENST00000532088 RAC2P15153 192 aa10.75□□□□□ -0.69
COPB1-208ENST00000532088 ZNF250P15622 560 aa10.75□□□□□ -0.69
COPB1-208ENST00000532088 SELEP16581 610 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms