RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 GCGP01275 180 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 KLK3P07288 261 aaPredicted RBP4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 TBPP20226 339 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 LOXP28300 417 aaPredicted RBP4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 SAA4P35542 130 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 RPL35P42766 123 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 HCCSP53701 268 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 GAS1P54826 345 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 MYL5Q02045 173 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 UNC119Q13432 240 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 SPANXN4Q5MJ08 99 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 ELP2Q6IA86 826 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 OR8G2PQ6IF36 304 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 STAC2Q6ZMT1 411 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 GDPD3Q7L5L3 318 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 DND1Q8IYX4 353 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 TMEM151AQ8N4L1 468 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 MS4A4EQ96PG1 132 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 OR5B12Q96R08 314 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 KIFC1Q9BW19 673 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 CHIAQ9BZP6 476 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 HS3ST3B1Q9Y662 390 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 MRC1P22897 1456 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 BCL9LQ86UU0 1499 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 RFPL4AA6NLU0 287 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 LOC110117498-PIK3R3F6TDL0 507 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 RFPL4AL1F8VTS6 287 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 H7C2Y5 167 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 KPNA4O00629 521 aaPredicted RBP4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 PEX11BO96011 259 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 PPBPP02775 128 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 RLN2P04090 185 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 OR8U9P0C7N5 309 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 ADRB3P13945 408 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 ZFP36P26651 326 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 ADORA1P30542 326 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 RPL8P62917 257 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 ZNF234Q14588 700 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 ZIC1Q15915 447 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 CALCRLQ16602 461 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 DCAF10Q5QP82 559 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 TBCKQ8TEA7 893 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 CASTOR1Q8WTX7 329 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 CRYGNQ8WXF5 182 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 Q96MF0 132 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 TMEM56Q96MV1 263 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 FOPNLQ96NB1 174 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 MEIS3Q99687 375 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 ACOT13Q9NPJ3 140 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 FBXO6Q9NRD1 293 aaPredicted RBP4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 RGS18Q9NS28 235 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 AMDHD2Q9Y303 409 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 WDR17Q8IZU2 1322 aa4.45□□□□□ -1.7
ECHDC1-222ENST00000531967 ADAMTS13Q76LX8 1427 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 SPEF2Q9C093 1822 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 SMIM9A6NGZ8 99 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 NARSO43776 548 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 SLC16A7O60669 478 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 CRYAAP02489 173 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 MT-ND4P03905 459 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 HCKP08631 526 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 PAEPP09466 180 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 ZNF17P17021 662 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 LMO1P25800 156 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 GRPRP30550 384 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 RPL5P46777 297 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 CD164Q04900 197 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 NFATC4Q14934 902 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 C16orf72Q14CZ0 275 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 NECTIN1Q15223 517 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 SLC1A5Q15758 541 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 SH2D5Q6ZV89 423 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 BHLHA9Q7RTU4 235 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 CA13Q8N1Q1 262 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 RASL10AQ92737 203 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 DYNLL2Q96FJ2 89 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 ZNF599Q96NL3 588 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 IL25Q9H293 177 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 B3GNT2Q9NY97 397 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 Q9UF83 564 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 C19orf25Q9UFG5 118 aaPredicted RBP4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 ZNF225Q9UK10 706 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 RALYQ9UKM9 306 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 FBXO5Q9UKT4 447 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 OR2W1Q9Y3N9 320 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 ABCC12Q96J65 1359 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 TRBV5-3A0A0A0MS03 114 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 LOC101059948A0A1B0GTJ6 334 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 CCDC160A6NGH7 325 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 KCNK1O00180 336 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 CCL21O00585 134 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 PRKYO43930 277 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 TRMUO75648 421 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 CDH1P12830 882 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 IGFBP5P24593 272 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 TFPI2P48307 235 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 SSR4P51571 173 aa4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 STXBP1P61764 594 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-222ENST00000531967 TRAM1Q15629 374 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms