RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 AURKCQ9UQB9 309 aa7.61□□□□□ -1.19
NEDD8-206ENST00000531430 PLXNB1O43157 2135 aa7.6□□□□□ -1.19
NEDD8-206ENST00000531430 A0A1B0GVI7 797 aa7.6□□□□□ -1.19
NEDD8-206ENST00000531430 J3QW42 95 aa7.6□□□□□ -1.19
NEDD8-206ENST00000531430 GPR37O15354 613 aa7.6□□□□□ -1.19
NEDD8-206ENST00000531430 AHCYL1O43865 530 aa7.6□□□□□ -1.19
NEDD8-206ENST00000531430 FSTL3O95633 263 aa7.6□□□□□ -1.19
NEDD8-206ENST00000531430 ZNF682O95780 498 aa7.6□□□□□ -1.19
NEDD8-206ENST00000531430 KDELR2P33947 212 aa7.6□□□□□ -1.19
NEDD8-206ENST00000531430 CD200P41217 278 aa7.6□□□□□ -1.19
NEDD8-206ENST00000531430 GATA4P43694 442 aa7.6□□□□□ -1.19
NEDD8-206ENST00000531430 GZMMP51124 257 aa7.6□□□□□ -1.19
NEDD8-206ENST00000531430 ELF3P78545 371 aaPredicted RBP7.6□□□□□ -1.19
NEDD8-206ENST00000531430 KLRD1Q13241 179 aa7.6□□□□□ -1.19
NEDD8-206ENST00000531430 IKZF1Q13422 519 aa7.6□□□□□ -1.19
NEDD8-206ENST00000531430 ANKDD1AQ495B1 522 aa7.6□□□□□ -1.19
NEDD8-206ENST00000531430 CDONQ4KMG0 1287 aa7.6□□□□□ -1.19
NEDD8-206ENST00000531430 VAX1Q5SQQ9 334 aa7.6□□□□□ -1.19
NEDD8-206ENST00000531430 FKBP9P1Q75LS8 142 aa7.6□□□□□ -1.19
NEDD8-206ENST00000531430 GALNT4Q8N4A0 578 aa7.6□□□□□ -1.19
NEDD8-206ENST00000531430 CELF2-AS1Q8N7Q2 184 aa7.6□□□□□ -1.19
NEDD8-206ENST00000531430 Q8TCH9 128 aa7.6□□□□□ -1.19
NEDD8-206ENST00000531430 PPP1R14AQ96A00 147 aa7.6□□□□□ -1.19
NEDD8-206ENST00000531430 FAM46AQ96IP4 442 aaKnown RBP7.6□□□□□ -1.19
NEDD8-206ENST00000531430 CLPTM1LQ96KA5 538 aa7.6□□□□□ -1.19
NEDD8-206ENST00000531430 PRRC1Q96M27 445 aa7.6□□□□□ -1.19
NEDD8-206ENST00000531430 NKX3-1Q99801 234 aaPredicted RBP7.6□□□□□ -1.19
NEDD8-206ENST00000531430 ADAT1Q9BUB4 502 aaKnown RBP7.6□□□□□ -1.19
NEDD8-206ENST00000531430 HDHD2Q9H0R4 259 aa7.6□□□□□ -1.19
NEDD8-206ENST00000531430 NMNAT1Q9HAN9 279 aaPredicted RBP7.6□□□□□ -1.19
NEDD8-206ENST00000531430 TRIM36Q9NQ86 728 aa7.6□□□□□ -1.19
NEDD8-206ENST00000531430 RPUSD1Q9UJJ7 312 aaKnown RBP7.6□□□□□ -1.19
NEDD8-206ENST00000531430 SNX13Q9Y5W8 968 aa7.6□□□□□ -1.19
NEDD8-206ENST00000531430 A0A087WUU8 490 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 CD300LBA8K4G0 201 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 H3BUX3 64 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 CDC42EP2O14613 210 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 NPFFO15130 113 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 NDUFB3O43676 98 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 NDUFB2O95178 105 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 MPIG6BO95866 241 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 IFNW1P05000 195 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 ACSM4P0C7M7 580 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 MDH1P40925 334 aaKnown RBP7.59□□□□□ -1.19
NEDD8-206ENST00000531430 CDKN2AP42771 156 aaKnown RBP7.59□□□□□ -1.19
NEDD8-206ENST00000531430 TPTEP56180 551 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 SELENOWP63302 87 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 SF3A3Q12874 501 aaKnown RBP eCLIP7.59□□□□□ -1.194e-7■■■□□ 16.8
NEDD8-206ENST00000531430 FHL1Q13642 323 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 RSPO1Q2MKA7 263 aaPredicted RBP7.59□□□□□ -1.19
NEDD8-206ENST00000531430 ZBTB37Q5TC79 503 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 ERICH5Q6P6B1 374 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 DNM1P34Q6PK57 102 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 MBOAT2Q6ZWT7 520 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 VTCN1Q7Z7D3 282 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 FAM90A1Q86YD7 464 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 RNF113BQ8IZP6 322 aaKnown RBP7.59□□□□□ -1.19
NEDD8-206ENST00000531430 SPERTQ8NA61 448 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 OR5T2Q8NGG2 359 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 OR2T6Q8NHC8 308 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 NPRL2Q8WTW4 380 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 ACOT11Q8WXI4 607 aaPredicted RBP7.59□□□□□ -1.19
NEDD8-206ENST00000531430 SSX3Q99909 188 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 TMEM120AQ9BXJ8 343 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 SLC22A4Q9H015 551 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 TMBIM4Q9HC24 238 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 NECAP2Q9NVZ3 263 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 ADA2Q9NZK5 511 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 ZNRD1Q9P1U0 126 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 FBLN5Q9UBX5 448 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 B9D1Q9UPM9 204 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 NOP16Q9Y3C1 178 aaKnown RBP7.59□□□□□ -1.19
NEDD8-206ENST00000531430 KPTNQ9Y664 436 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 LHFPL6Q9Y693 200 aa7.59□□□□□ -1.19
NEDD8-206ENST00000531430 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.58□□□□□ -1.2
NEDD8-206ENST00000531430 LOC100653049A0A140TA62 436 aa7.58□□□□□ -1.2
NEDD8-206ENST00000531430 A0A1B0GW55 424 aa7.58□□□□□ -1.2
NEDD8-206ENST00000531430 RNASEK-C17orf49H0YIS7 233 aa7.58□□□□□ -1.2
NEDD8-206ENST00000531430 GSTA4O15217 222 aa7.58□□□□□ -1.2
NEDD8-206ENST00000531430 XPNPEP2O43895 674 aa7.58□□□□□ -1.2
NEDD8-206ENST00000531430 GMDSO60547 372 aa7.58□□□□□ -1.2
NEDD8-206ENST00000531430 KRT34O76011 436 aa7.58□□□□□ -1.2
NEDD8-206ENST00000531430 RENP00797 406 aa7.58□□□□□ -1.2
NEDD8-206ENST00000531430 DUX4L2P0CJ85 424 aa7.58□□□□□ -1.2
NEDD8-206ENST00000531430 DUX4L3P0CJ86 424 aa7.58□□□□□ -1.2
NEDD8-206ENST00000531430 DUX4L4P0CJ87 422 aa7.58□□□□□ -1.2
NEDD8-206ENST00000531430 DUX4L5P0CJ88 424 aa7.58□□□□□ -1.2
NEDD8-206ENST00000531430 DUX4L6P0CJ89 424 aa7.58□□□□□ -1.2
NEDD8-206ENST00000531430 DUX4L7P0CJ90 424 aa7.58□□□□□ -1.2
NEDD8-206ENST00000531430 TROVE2P10155 538 aaKnown RBP eCLIP7.58□□□□□ -1.2
NEDD8-206ENST00000531430 ZNF26P17031 533 aaPredicted RBP7.58□□□□□ -1.2
NEDD8-206ENST00000531430 PAX6P26367 422 aa7.58□□□□□ -1.2
NEDD8-206ENST00000531430 CRABP1P29762 137 aa7.58□□□□□ -1.2
NEDD8-206ENST00000531430 SDHAP31040 664 aa7.58□□□□□ -1.2
NEDD8-206ENST00000531430 RPS6KA3P51812 740 aa7.58□□□□□ -1.2
NEDD8-206ENST00000531430 GUCA2AQ02747 115 aa7.58□□□□□ -1.2
NEDD8-206ENST00000531430 EMX1Q04741 257 aaPredicted RBP7.58□□□□□ -1.2
NEDD8-206ENST00000531430 TRAP1Q12931 704 aaKnown RBP7.58□□□□□ -1.2
NEDD8-206ENST00000531430 TAF13Q15543 124 aa7.58□□□□□ -1.2
NEDD8-206ENST00000531430 MICBQ29980 383 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms