RNA–Protein interactions for RNA: ENST00000530836.5

VPS28-212, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-212ENST00000530836 FAM57BQ71RH2 274 aa18.49■□□□□ 0.55
VPS28-212ENST00000530836 CLEC18CQ8NCF0 446 aa18.49■□□□□ 0.55
VPS28-212ENST00000530836 BOD1Q96IK1 185 aa18.49■□□□□ 0.55
VPS28-212ENST00000530836 ZNF391Q9UJN7 358 aa18.49■□□□□ 0.55
VPS28-212ENST00000530836 TENM4Q6N022 2769 aa18.48■□□□□ 0.55
VPS28-212ENST00000530836 MED12LQ86YW9 2145 aa18.48■□□□□ 0.55
VPS28-212ENST00000530836 A0A0G2JK05 382 aa18.48■□□□□ 0.55
VPS28-212ENST00000530836 CTDSP2O14595 271 aa18.48■□□□□ 0.55
VPS28-212ENST00000530836 NCR1O76036 304 aa18.48■□□□□ 0.55
VPS28-212ENST00000530836 APEX1P27695 318 aaKnown RBP18.48■□□□□ 0.55
VPS28-212ENST00000530836 PPP3R1P63098 170 aa18.48■□□□□ 0.55
VPS28-212ENST00000530836 PABPC1L2AQ5JQF8 200 aa18.48■□□□□ 0.55
VPS28-212ENST00000530836 CEP78Q5JTW2 689 aa18.48■□□□□ 0.55
VPS28-212ENST00000530836 SPANXN2Q5MJ10 180 aa18.48■□□□□ 0.55
VPS28-212ENST00000530836 SEM1Q6ZVN7 128 aa18.48■□□□□ 0.55
VPS28-212ENST00000530836 DOK3Q7L591 496 aa18.48■□□□□ 0.55
VPS28-212ENST00000530836 NR2C2APQ86WQ0 139 aa18.48■□□□□ 0.55
VPS28-212ENST00000530836 BCL2L2Q92843 193 aaPredicted RBP18.48■□□□□ 0.55
VPS28-212ENST00000530836 CCDC120Q96HB5 630 aa18.48■□□□□ 0.55
VPS28-212ENST00000530836 OR10A2Q9H208 303 aa18.48■□□□□ 0.55
VPS28-212ENST00000530836 ZNF275Q9NSD4 429 aaPredicted RBP18.48■□□□□ 0.55
VPS28-212ENST00000530836 ZNF224Q9NZL3 707 aa18.48■□□□□ 0.55
VPS28-212ENST00000530836 PROCRQ9UNN8 238 aa18.48■□□□□ 0.55
VPS28-212ENST00000530836 V9GY05 133 aa18.48■□□□□ 0.55
VPS28-212ENST00000530836 GCN1Q92616 2671 aaKnown RBP18.47■□□□□ 0.55
VPS28-212ENST00000530836 A0A096LPE4 126 aa18.47■□□□□ 0.55
VPS28-212ENST00000530836 A0A1W2PPZ6 126 aa18.47■□□□□ 0.55
VPS28-212ENST00000530836 SMIM30A4D0T7 59 aa18.47■□□□□ 0.55
VPS28-212ENST00000530836 TMIGD3P0DMS9 266 aaPredicted RBP18.47■□□□□ 0.55
VPS28-212ENST00000530836 EPXP11678 715 aa18.47■□□□□ 0.55
VPS28-212ENST00000530836 MAGEB1P43366 347 aa18.47■□□□□ 0.55
VPS28-212ENST00000530836 FOXG1P55316 489 aaPredicted RBP18.47■□□□□ 0.55
VPS28-212ENST00000530836 PLP2Q04941 152 aa18.47■□□□□ 0.55
VPS28-212ENST00000530836 IDNKQ5T6J7 187 aa18.47■□□□□ 0.55
VPS28-212ENST00000530836 NCCRP1Q6ZVX7 275 aaPredicted RBP18.47■□□□□ 0.55
VPS28-212ENST00000530836 AKR7LQ8NHP1 331 aa18.47■□□□□ 0.55
VPS28-212ENST00000530836 OR51E1Q8TCB6 317 aa18.47■□□□□ 0.55
VPS28-212ENST00000530836 PALMDQ9NP74 551 aa18.47■□□□□ 0.55
VPS28-212ENST00000530836 ABRACLQ9P1F3 81 aa18.47■□□□□ 0.55
VPS28-212ENST00000530836 ADAM30Q9UKF2 790 aa18.47■□□□□ 0.55
VPS28-212ENST00000530836 A0A1B0GTI1 187 aa18.46■□□□□ 0.55
VPS28-212ENST00000530836 MEGF11A6BM72 1044 aa18.46■□□□□ 0.55
VPS28-212ENST00000530836 TNFSF13O75888 250 aa18.46■□□□□ 0.55
VPS28-212ENST00000530836 AGFG2O95081 481 aa18.46■□□□□ 0.55
VPS28-212ENST00000530836 PATE4P0C8F1 98 aa18.46■□□□□ 0.55
VPS28-212ENST00000530836 SLC2A1P11166 492 aa18.46■□□□□ 0.55
VPS28-212ENST00000530836 BMP4P12644 408 aa18.46■□□□□ 0.55
VPS28-212ENST00000530836 OR10A3P58181 314 aa18.46■□□□□ 0.55
VPS28-212ENST00000530836 LRRTM1Q86UE6 522 aa18.46■□□□□ 0.55
VPS28-212ENST00000530836 CCDC190Q86UF4 302 aa18.46■□□□□ 0.55
VPS28-212ENST00000530836 SERPINA12Q8IW75 414 aa18.46■□□□□ 0.55
VPS28-212ENST00000530836 MFSD4AQ8N468 514 aa18.46■□□□□ 0.55
VPS28-212ENST00000530836 PARP16Q8N5Y8 322 aa18.46■□□□□ 0.55
VPS28-212ENST00000530836 C1orf162Q8NEQ5 155 aaPredicted RBP18.46■□□□□ 0.55
VPS28-212ENST00000530836 FGFBP3Q8TAT2 258 aa18.46■□□□□ 0.55
VPS28-212ENST00000530836 DAPK2Q9UIK4 370 aa18.46■□□□□ 0.55
VPS28-212ENST00000530836 AK6Q9Y3D8 172 aaKnown RBP18.46■□□□□ 0.55
VPS28-212ENST00000530836 WIPF3A6NGB9 483 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 ANXA2P2A6NMY6 339 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 AIPO00170 330 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 TOXO94900 526 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 IGLV3-1P01715 115 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 CD79AP11912 226 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 CD40LGP29965 261 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 RAB1AP62820 205 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 ADORA2A-AS1P86434 159 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 VWA1Q6PCB0 445 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 COMMD2Q86X83 199 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 RND1Q92730 232 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 SLC30A2Q9BRI3 323 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 SFXN3Q9BWM7 321 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 RGCCQ9H4X1 137 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 GPR84Q9NQS5 396 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 ARHGAP21Q5T5U3 1957 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 FREM1Q5H8C1 2179 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 IFITM5A6NNB3 132 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 MTRF1O75570 445 aaKnown RBP18.45■□□□□ 0.54
VPS28-212ENST00000530836 HLA-HP01893 362 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 DBHP09172 617 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 IGFBP3P17936 291 aaPredicted RBP18.45■□□□□ 0.54
VPS28-212ENST00000530836 COX5AP20674 150 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 IGHV1-2P23083 117 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 CEACAM8P31997 349 aaPredicted RBP18.45■□□□□ 0.54
VPS28-212ENST00000530836 TNFSF8P32971 234 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 FOXF2Q12947 444 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 P2RY6Q15077 328 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 BEND4Q6ZU67 534 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 ZNF433Q8N7K0 673 aaPredicted RBP18.45■□□□□ 0.54
VPS28-212ENST00000530836 PLPP7Q8NBV4 271 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 OR5D14Q8NGL3 314 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 C10orf35Q96D05 121 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 STARD4Q96DR4 205 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 ABCB9Q9NP78 766 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 COMMD3Q9UBI1 195 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 N6AMT1Q9Y5N5 214 aa18.45■□□□□ 0.54
VPS28-212ENST00000530836 MYO7BQ6PIF6 2116 aa18.44■□□□□ 0.54
VPS28-212ENST00000530836 DOCK7Q96N67 2140 aa18.44■□□□□ 0.54
VPS28-212ENST00000530836 TRAV8-7A0A075B6U6 113 aa18.44■□□□□ 0.54
VPS28-212ENST00000530836 LOC390937A0A1W2PQ73 354 aa18.44■□□□□ 0.54
VPS28-212ENST00000530836 CGAP01215 116 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms