RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 MRPL22Q9NWU5 206 aaKnown RBP3.35□□□□□ -1.87
CASP4-208ENST00000530309 PDP1Q9P0J1 537 aaPredicted RBP3.35□□□□□ -1.87
CASP4-208ENST00000530309 MYEF2Q9P2K5 600 aaKnown RBP3.35□□□□□ -1.87
CASP4-208ENST00000530309 MAP3K1Q13233 1512 aa3.34□□□□□ -1.87
CASP4-208ENST00000530309 ABCC8Q09428 1581 aa3.34□□□□□ -1.87
CASP4-208ENST00000530309 MROH2BQ7Z745 1585 aa3.34□□□□□ -1.87
CASP4-208ENST00000530309 COL4A4P53420 1690 aaPredicted RBP3.34□□□□□ -1.87
CASP4-208ENST00000530309 TRAV6A0A075B6T7 132 aa3.34□□□□□ -1.87
CASP4-208ENST00000530309 C5orf63A6NC05 138 aa3.34□□□□□ -1.87
CASP4-208ENST00000530309 LRRIQ4A6NIV6 560 aa3.34□□□□□ -1.87
CASP4-208ENST00000530309 KRBOX1C9JBD0 128 aa3.34□□□□□ -1.87
CASP4-208ENST00000530309 GOLGA8TH3BQL2 631 aa3.34□□□□□ -1.87
CASP4-208ENST00000530309 GABRPO00591 440 aa3.34□□□□□ -1.87
CASP4-208ENST00000530309 ZNF806P0C7X5 589 aa3.34□□□□□ -1.87
CASP4-208ENST00000530309 UBCP0CG48 685 aaKnown RBP3.34□□□□□ -1.87
CASP4-208ENST00000530309 PGA5P0DJD9 388 aa3.34□□□□□ -1.87
CASP4-208ENST00000530309 CD37P11049 281 aa3.34□□□□□ -1.87
CASP4-208ENST00000530309 ANP32AP39687 249 aaKnown RBP3.34□□□□□ -1.87
CASP4-208ENST00000530309 TAS2R31P59538 309 aa3.34□□□□□ -1.87
CASP4-208ENST00000530309 RAD51Q06609 339 aa3.34□□□□□ -1.87
CASP4-208ENST00000530309 ZNF816Q0VGE8 651 aaPredicted RBP3.34□□□□□ -1.87
CASP4-208ENST00000530309 SHHQ15465 462 aa3.34□□□□□ -1.87
CASP4-208ENST00000530309 IGFL1Q6UW32 110 aa3.34□□□□□ -1.87
CASP4-208ENST00000530309 RNF182Q8N6D2 247 aa3.34□□□□□ -1.87
CASP4-208ENST00000530309 GPR26Q8NDV2 337 aa3.34□□□□□ -1.87
CASP4-208ENST00000530309 RPEQ96AT9 228 aa3.34□□□□□ -1.87
CASP4-208ENST00000530309 OPALINQ96PE5 141 aa3.34□□□□□ -1.87
CASP4-208ENST00000530309 RBBP8Q99708 897 aa3.34□□□□□ -1.87
CASP4-208ENST00000530309 RSG1Q9BU20 258 aa3.34□□□□□ -1.87
CASP4-208ENST00000530309 CALN1Q9BXU9 219 aa3.34□□□□□ -1.87
CASP4-208ENST00000530309 C8orf17Q9NRJ1 99 aa3.34□□□□□ -1.87
CASP4-208ENST00000530309 FHAD1B1AJZ9 1412 aa3.34□□□□□ -1.88
CASP4-208ENST00000530309 CECR2Q9BXF3 1484 aa3.34□□□□□ -1.88
CASP4-208ENST00000530309 SMIM26A0A096LP01 95 aa3.33□□□□□ -1.88
CASP4-208ENST00000530309 IGHV3OR16-9A0A0B4J2B5 98 aa3.33□□□□□ -1.88
CASP4-208ENST00000530309 IGKV6-21A0A0C4DH24 114 aa3.33□□□□□ -1.88
CASP4-208ENST00000530309 GABRR3A8MPY1 467 aa3.33□□□□□ -1.88
CASP4-208ENST00000530309 ZNF850A8MQ14 1090 aa3.33□□□□□ -1.88
CASP4-208ENST00000530309 SERPINE3A8MV23 424 aa3.33□□□□□ -1.88
CASP4-208ENST00000530309 RRP8O43159 456 aaKnown RBP3.33□□□□□ -1.88
CASP4-208ENST00000530309 NMT2O60551 498 aa3.33□□□□□ -1.88
CASP4-208ENST00000530309 PGA4P0DJD7 388 aa3.33□□□□□ -1.88
CASP4-208ENST00000530309 PGA3P0DJD8 388 aa3.33□□□□□ -1.88
CASP4-208ENST00000530309 SFTPCP11686 197 aa3.33□□□□□ -1.88
CASP4-208ENST00000530309 PFN2P35080 140 aa3.33□□□□□ -1.88
CASP4-208ENST00000530309 FABP6P51161 128 aa3.33□□□□□ -1.88
CASP4-208ENST00000530309 RPS15AP62244 130 aaKnown RBP3.33□□□□□ -1.88
CASP4-208ENST00000530309 PITPNAQ00169 270 aa3.33□□□□□ -1.88
CASP4-208ENST00000530309 IRF8Q02556 426 aa3.33□□□□□ -1.88
CASP4-208ENST00000530309 PIGHQ14442 188 aaPredicted RBP3.33□□□□□ -1.88
CASP4-208ENST00000530309 RBMY1FQ15415 496 aaKnown RBP3.33□□□□□ -1.88
CASP4-208ENST00000530309 NEGR1Q7Z3B1 354 aa3.33□□□□□ -1.88
CASP4-208ENST00000530309 TMEM256Q8N2U0 113 aa3.33□□□□□ -1.88
CASP4-208ENST00000530309 OR52P1PQ8NH57 321 aa3.33□□□□□ -1.88
CASP4-208ENST00000530309 HAUS1Q96CS2 278 aa3.33□□□□□ -1.88
CASP4-208ENST00000530309 TBL1YQ9BQ87 522 aa3.33□□□□□ -1.88
CASP4-208ENST00000530309 GGTLC1Q9BX51 225 aa3.33□□□□□ -1.88
CASP4-208ENST00000530309 IQCGQ9H095 443 aaKnown RBP3.33□□□□□ -1.88
CASP4-208ENST00000530309 CAB39Q9Y376 341 aaPredicted RBP3.33□□□□□ -1.88
CASP4-208ENST00000530309 PCDH11XQ9BZA7 1347 aa3.33□□□□□ -1.88
CASP4-208ENST00000530309 CCNB3Q8WWL7 1395 aa3.33□□□□□ -1.88
CASP4-208ENST00000530309 RAB3GAP2Q9H2M9 1393 aa3.33□□□□□ -1.88
CASP4-208ENST00000530309 DENND4AQ7Z401 1863 aa3.33□□□□□ -1.88
CASP4-208ENST00000530309 IGLV3-12A0A075B6K2 115 aa3.32□□□□□ -1.88
CASP4-208ENST00000530309 A0A1W2PRD5 423 aa3.32□□□□□ -1.88
CASP4-208ENST00000530309 SUPT3HB4E1H0 165 aa3.32□□□□□ -1.88
CASP4-208ENST00000530309 TALDO1P37837 337 aa3.32□□□□□ -1.88
CASP4-208ENST00000530309 TAS2R46P59540 309 aa3.32□□□□□ -1.88
CASP4-208ENST00000530309 PRSS8Q16651 343 aa3.32□□□□□ -1.88
CASP4-208ENST00000530309 RNASE13Q5GAN3 156 aaKnown RBP3.32□□□□□ -1.88
CASP4-208ENST00000530309 H3F3CQ6NXT2 135 aa3.32□□□□□ -1.88
CASP4-208ENST00000530309 VKORC1L1Q8N0U8 176 aa3.32□□□□□ -1.88
CASP4-208ENST00000530309 OSR2Q8N2R0 312 aa3.32□□□□□ -1.88
CASP4-208ENST00000530309 OR9A2Q8NGT5 310 aa3.32□□□□□ -1.88
CASP4-208ENST00000530309 OR51F2Q8NH61 342 aa3.32□□□□□ -1.88
CASP4-208ENST00000530309 C17orf50Q8WW18 174 aa3.32□□□□□ -1.88
CASP4-208ENST00000530309 SLC25A46Q96AG3 418 aa3.32□□□□□ -1.88
CASP4-208ENST00000530309 C9orf72Q96LT7 481 aa3.32□□□□□ -1.88
CASP4-208ENST00000530309 TIMM29Q9BSF4 260 aa3.32□□□□□ -1.88
CASP4-208ENST00000530309 ZNF2Q9BSG1 426 aaPredicted RBP3.32□□□□□ -1.88
CASP4-208ENST00000530309 EXOSC4Q9NPD3 245 aaKnown RBP3.32□□□□□ -1.88
CASP4-208ENST00000530309 AHSPQ9NZD4 102 aa3.32□□□□□ -1.88
CASP4-208ENST00000530309 ENOPH1Q9UHY7 261 aa3.32□□□□□ -1.88
CASP4-208ENST00000530309 WDR19Q8NEZ3 1342 aa3.32□□□□□ -1.88
CASP4-208ENST00000530309 SPATA31E1Q6ZUB1 1445 aa3.32□□□□□ -1.88
CASP4-208ENST00000530309 ARAP1Q96P48 1450 aa3.32□□□□□ -1.88
CASP4-208ENST00000530309 BAZ1AQ9NRL2 1556 aaPredicted RBP3.32□□□□□ -1.88
CASP4-208ENST00000530309 PRXQ9BXM0 1461 aa3.31□□□□□ -1.88
CASP4-208ENST00000530309 NCOA1Q15788 1441 aa3.31□□□□□ -1.88
CASP4-208ENST00000530309 SETD5Q9C0A6 1442 aa3.31□□□□□ -1.88
CASP4-208ENST00000530309 NDUFC2-KCTD14E9PQ53 114 aa3.31□□□□□ -1.88
CASP4-208ENST00000530309 ERI3O43414 337 aaKnown RBP3.31□□□□□ -1.88
CASP4-208ENST00000530309 GLSO94925 669 aaPredicted RBP3.31□□□□□ -1.88
CASP4-208ENST00000530309 IL4P05112 153 aa3.31□□□□□ -1.88
CASP4-208ENST00000530309 GLAP06280 429 aa3.31□□□□□ -1.88
CASP4-208ENST00000530309 ASGR1P07306 291 aa3.31□□□□□ -1.88
CASP4-208ENST00000530309 KRT16P08779 473 aa3.31□□□□□ -1.88
CASP4-208ENST00000530309 IL1RNP18510 177 aa3.31□□□□□ -1.88
CASP4-208ENST00000530309 ME2P23368 584 aa3.31□□□□□ -1.88
CASP4-208ENST00000530309 HTR1DP28221 377 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms