RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 TMEM185BQ9H7F4 350 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 GPN1Q9HCN4 374 aaPredicted RBP10.4□□□□□ -0.74
USF1-208ENST00000528768 RANGRFQ9HD47 186 aaPredicted RBP10.4□□□□□ -0.74
USF1-208ENST00000528768 HRASLSQ9HDD0 168 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 EMC7Q9NPA0 242 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 G6PC2Q9NQR9 355 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 ANKRD10Q9NXR5 420 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 TCFL5Q9UL49 500 aa10.4□□□□□ -0.74
USF1-208ENST00000528768 RBMX2Q9Y388 322 aaKnown RBP10.4□□□□□ -0.74
USF1-208ENST00000528768 NIPBLQ6KC79 2804 aaeCLIP10.4□□□□□ -0.74
USF1-208ENST00000528768 CSMD2Q7Z408 3487 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 TRAV6A0A075B6T7 132 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 A0A0B4J293 547 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 ANKRD20A5PA0PJZ0 165 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 GGT3PA6NGU5 568 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 A8MV72 311 aaPredicted RBP10.39□□□□□ -0.75
USF1-208ENST00000528768 LINC01387J3KSC0 135 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 EIF1AYO14602 144 aaKnown RBP10.39□□□□□ -0.75
USF1-208ENST00000528768 SYT7O43581 403 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 PEX14O75381 377 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 MT-ND4P03905 459 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 QDPRP09417 244 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 CCL3P10147 92 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 ZNF20P17024 532 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 IGFBP3P17936 291 aaPredicted RBP10.39□□□□□ -0.75
USF1-208ENST00000528768 PRSS3P35030 304 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 BTCP35070 178 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 POU3F4P49335 361 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 P2RY4P51582 365 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 CLDN17P56750 224 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 ACTBP60709 375 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 PSMA6P60900 246 aaKnown RBP10.39□□□□□ -0.75
USF1-208ENST00000528768 RPS18P62269 152 aaKnown RBP10.39□□□□□ -0.75
USF1-208ENST00000528768 ACTG1P63261 375 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 C2orf76Q3KRA6 126 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 METTL11BQ5VVY1 283 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 RAB12Q6IQ22 244 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 NHLRC1Q6VVB1 395 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 PPP1R32Q7Z5V6 425 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 ADGRE4PQ86SQ3 457 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 GLCCI1Q86VQ1 547 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 DNAAF1Q8NEP3 725 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 OR51D1Q8NGF3 324 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 OR51A4Q8NGJ6 313 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 OR5D14Q8NGL3 314 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 OR5M1Q8NGP8 315 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 SCMH1Q96GD3 660 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 HYLS1Q96M11 299 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 SF3B5Q9BWJ5 86 aaKnown RBP10.39□□□□□ -0.75
USF1-208ENST00000528768 PBOV1Q9GZY1 135 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 ATG5Q9H1Y0 275 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 SLA2Q9H6Q3 261 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 RANBP3Q9H6Z4 567 aaPredicted RBP10.39□□□□□ -0.75
USF1-208ENST00000528768 SCPEP1Q9HB40 452 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 SH2D2AQ9NP31 389 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 MCUBQ9NWR8 336 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 TAS2R4Q9NYW5 299 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 GLTPQ9NZD2 209 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 GDF2Q9UK05 429 aaPredicted RBP10.39□□□□□ -0.75
USF1-208ENST00000528768 RCE1Q9Y256 329 aa10.39□□□□□ -0.75
USF1-208ENST00000528768 SPG11Q96JI7 2443 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 CPAMD8Q8IZJ3 1885 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 A0A0A6YYJ9 748 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 OR2M5A3KFT3 312 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 P2RY10O00398 339 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 RGS13O14921 159 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 CTAG2O75638 210 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 CELA2AP08217 269 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 CD37P11049 281 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 ANXA3P12429 323 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 EDN3P14138 238 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 RAB6AP20340 208 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 BDKRB2P30411 391 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 RCVRNP35243 200 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 GNALP38405 381 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 EIF1AXP47813 144 aaKnown RBP10.38□□□□□ -0.75
USF1-208ENST00000528768 AGFG1P52594 562 aaKnown RBP10.38□□□□□ -0.75
USF1-208ENST00000528768 NKX2-5P52952 324 aaPredicted RBP10.38□□□□□ -0.75
USF1-208ENST00000528768 CDK10Q15131 360 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 TESK1Q15569 626 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 HIST3H3Q16695 136 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 C1orf100Q5SVJ3 147 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 CARD17Q5XLA6 110 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 SLC25A25Q6KCM7 469 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 PGAP1Q75T13 922 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 CDH26Q8IXH8 852 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 ZADH2Q8N4Q0 377 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 JAGN1Q8N5M9 183 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 GRPEL2Q8TAA5 225 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 NTNG2Q96CW9 530 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 MED30Q96HR3 178 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 UQCC2Q9BRT2 126 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 TP63Q9H3D4 680 aaPredicted RBP10.38□□□□□ -0.75
USF1-208ENST00000528768 AUNIPQ9H7T9 357 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 TMEM138Q9NPI0 162 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 FAM206AQ9NX38 181 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 UPB1Q9UBR1 384 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 MRPS18CQ9Y3D5 142 aaKnown RBP10.38□□□□□ -0.75
USF1-208ENST00000528768 AKAP9Q99996 3911 aa10.38□□□□□ -0.75
USF1-208ENST00000528768 SVILO95425 2214 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms