RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 TVP23AA6NH52 213 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 ZNF878C9JN71 531 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 TMEM178BH3BS89 294 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 XRCC2O43543 280 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 GLCEO94923 617 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 IGHV2-70P01814 119 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 SPARCP09486 303 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 OSMP13725 252 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 CFL1P23528 166 aaKnown RBP8.1□□□□□ -1.11
CHD7-208ENST00000528280 FPR2P25090 351 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 GSTT1P30711 240 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 OTX1P32242 354 aaPredicted RBP8.1□□□□□ -1.11
CHD7-208ENST00000528280 GATA4P43694 442 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 KCNJ8Q15842 424 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.1□□□□□ -1.11
CHD7-208ENST00000528280 OR5AS1Q8N127 324 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 ZNF454Q8N9F8 522 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 OR52H1Q8NGJ2 320 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 OR8D4Q8NGM9 314 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 OR6K6Q8NGW6 343 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 OR4Q3Q8NH05 313 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 ZNF418Q8TF45 676 aaPredicted RBP8.1□□□□□ -1.11
CHD7-208ENST00000528280 ZFAND2BQ8WV99 257 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 SLAMF6Q96DU3 332 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 PLEKHA8Q96JA3 519 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 CLPTM1LQ96KA5 538 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 MEGF10Q96KG7 1140 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 JMJD8Q96S16 334 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 INTS14Q96SY0 518 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 COPS4Q9BT78 406 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 OCEL1Q9H607 264 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 C7orf69Q9H7B7 122 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 METTL17Q9H7H0 456 aaPredicted RBP8.1□□□□□ -1.11
CHD7-208ENST00000528280 PNRC2Q9NPJ4 139 aaKnown RBP8.1□□□□□ -1.11
CHD7-208ENST00000528280 TRIM36Q9NQ86 728 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 G6PC2Q9NQR9 355 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 CENPMQ9NSP4 180 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 ARMC1Q9NVT9 282 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 UBAP1Q9NZ09 502 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 MIOXQ9UGB7 285 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 POMPQ9Y244 141 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 POLR3KQ9Y2Y1 108 aaPredicted RBP8.1□□□□□ -1.11
CHD7-208ENST00000528280 COMMD3-BMI1R4GMX3 469 aa8.1□□□□□ -1.11
CHD7-208ENST00000528280 DYSFO75923 2080 aa8.09□□□□□ -1.11
CHD7-208ENST00000528280 TCRBV3S1A0A5B6 114 aa8.09□□□□□ -1.11
CHD7-208ENST00000528280 CD300LBA8K4G0 201 aa8.09□□□□□ -1.11
CHD7-208ENST00000528280 PRR23D1E9PI22 279 aaPredicted RBP8.09□□□□□ -1.11
CHD7-208ENST00000528280 GSC2O15499 205 aa8.09□□□□□ -1.11
CHD7-208ENST00000528280 KCNAB3O43448 404 aa8.09□□□□□ -1.11
CHD7-208ENST00000528280 SOX14O95416 240 aa8.09□□□□□ -1.11
CHD7-208ENST00000528280 PRR23D2P0DMB1 279 aaPredicted RBP8.09□□□□□ -1.11
CHD7-208ENST00000528280 POU1F1P28069 291 aa8.09□□□□□ -1.11
CHD7-208ENST00000528280 HSD11B1P28845 292 aa8.09□□□□□ -1.11
CHD7-208ENST00000528280 GTF2A1P52655 376 aaPredicted RBP8.09□□□□□ -1.11
CHD7-208ENST00000528280 CDK5Q00535 292 aa8.09□□□□□ -1.11
CHD7-208ENST00000528280 GINS1Q14691 196 aa8.09□□□□□ -1.11
CHD7-208ENST00000528280 OR8G1Q15617 311 aa8.09□□□□□ -1.11
CHD7-208ENST00000528280 ESCO2Q56NI9 601 aa8.09□□□□□ -1.11
CHD7-208ENST00000528280 SLC35D3Q5M8T2 416 aa8.09□□□□□ -1.11
CHD7-208ENST00000528280 USP43Q70EL4 1123 aa8.09□□□□□ -1.11
CHD7-208ENST00000528280 NAA40Q86UY6 237 aa8.09□□□□□ -1.11
CHD7-208ENST00000528280 ZNF511Q8NB15 262 aa8.09□□□□□ -1.11
CHD7-208ENST00000528280 OR51L1Q8NGJ5 315 aa8.09□□□□□ -1.11
CHD7-208ENST00000528280 OR9Q1Q8NGQ5 310 aa8.09□□□□□ -1.11
CHD7-208ENST00000528280 OTULINQ96BN8 352 aa8.09□□□□□ -1.11
CHD7-208ENST00000528280 NIPSNAP1Q9BPW8 284 aa8.09□□□□□ -1.11
CHD7-208ENST00000528280 WDR76Q9H967 626 aa8.09□□□□□ -1.11
CHD7-208ENST00000528280 MARCH7Q9H992 704 aa8.09□□□□□ -1.11
CHD7-208ENST00000528280 FN3KRPQ9HA64 309 aa8.09□□□□□ -1.11
CHD7-208ENST00000528280 RNPEPL1Q9HAU8 725 aa8.09□□□□□ -1.11
CHD7-208ENST00000528280 C14orf119Q9NWQ9 140 aa8.09□□□□□ -1.11
CHD7-208ENST00000528280 VNN3Q9NY84 501 aa8.09□□□□□ -1.11
CHD7-208ENST00000528280 MRPL15Q9P015 296 aaKnown RBP8.09□□□□□ -1.11
CHD7-208ENST00000528280 LRCH1Q9Y2L9 728 aa8.09□□□□□ -1.11
CHD7-208ENST00000528280 ANKRD30BLA7E2S9 258 aa8.08□□□□□ -1.12
CHD7-208ENST00000528280 PRODHO43272 600 aa8.08□□□□□ -1.12
CHD7-208ENST00000528280 NDUFA2O43678 99 aa8.08□□□□□ -1.12
CHD7-208ENST00000528280 FKBP6O75344 327 aa8.08□□□□□ -1.12
CHD7-208ENST00000528280 WNT2P09544 360 aa8.08□□□□□ -1.12
CHD7-208ENST00000528280 CD200P41217 278 aa8.08□□□□□ -1.12
CHD7-208ENST00000528280 LCN2P80188 198 aa8.08□□□□□ -1.12
CHD7-208ENST00000528280 EIF2B1Q14232 305 aaKnown RBP8.08□□□□□ -1.12
CHD7-208ENST00000528280 NLRC3Q7RTR2 1065 aa8.08□□□□□ -1.12
CHD7-208ENST00000528280 C1QL2Q7Z5L3 287 aa8.08□□□□□ -1.12
CHD7-208ENST00000528280 ERI1Q8IV48 349 aaKnown RBP8.08□□□□□ -1.12
CHD7-208ENST00000528280 FTMTQ8N4E7 242 aa8.08□□□□□ -1.12
CHD7-208ENST00000528280 BHLHE23Q8NDY6 225 aa8.08□□□□□ -1.12
CHD7-208ENST00000528280 Q8TCH9 128 aa8.08□□□□□ -1.12
CHD7-208ENST00000528280 ZNRF4Q8WWF5 429 aa8.08□□□□□ -1.12
CHD7-208ENST00000528280 UTP4Q969X6 686 aaKnown RBP8.08□□□□□ -1.12
CHD7-208ENST00000528280 MRI1Q9BV20 369 aa8.08□□□□□ -1.12
CHD7-208ENST00000528280 PRRG3Q9BZD7 231 aa8.08□□□□□ -1.12
CHD7-208ENST00000528280 OR51V1Q9H2C8 321 aa8.08□□□□□ -1.12
CHD7-208ENST00000528280 RGCCQ9H4X1 137 aa8.08□□□□□ -1.12
CHD7-208ENST00000528280 DCLRE1BQ9H816 532 aa8.08□□□□□ -1.12
CHD7-208ENST00000528280 NIPAL2Q9H841 368 aa8.08□□□□□ -1.12
CHD7-208ENST00000528280 TMEM165Q9HC07 324 aa8.08□□□□□ -1.12
CHD7-208ENST00000528280 OR5V1Q9UGF6 321 aa8.08□□□□□ -1.12
CHD7-208ENST00000528280 ENOPH1Q9UHY7 261 aa8.08□□□□□ -1.12
CHD7-208ENST00000528280 ZNF391Q9UJN7 358 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms