RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 TEX30Q5JUR7 227 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 PRAMEF6Q5VXH4 476 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 PGAP1Q75T13 922 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 SPATC1Q76KD6 591 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 HS3ST5Q8IZT8 346 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 KLHL36Q8N4N3 616 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 C19orf18Q8NEA5 215 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 OR2T33Q8NG76 320 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 NANPQ8TBE9 248 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 GIPC3Q8TF64 312 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 DVL3Q92997 716 aaPredicted RBP8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 SLAMF6Q96DU3 332 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 AMELYQ99218 206 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 SLC6A7Q99884 636 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 TMEM246Q9BRR3 403 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 ESM1Q9NQ30 184 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 BAIAP2Q9UQB8 552 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 INSIG2Q9Y5U4 225 aa8.74□□□□□ -1.01
PRPF40B-204ENST00000527253 DHRS12A0PJE2 317 aa8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 AQP12BA6NM10 295 aa8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 IFNL4K9M1U5 179 aa8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 DYNC1I1O14576 645 aa8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 CST1P01037 141 aa8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 PRKACGP22612 351 aa8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 CA6P23280 308 aa8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 FMO3P31513 532 aa8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 CD80P33681 288 aa8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 GRK5P34947 590 aa8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 MALLQ13021 153 aa8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 ZNF181Q2M3W8 571 aa8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 ZNF404Q494X3 552 aa8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 DRAM2Q6UX65 266 aa8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 LYPD2Q6UXB3 125 aa8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 PRSS45Q7RTY3 260 aa8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 MRPL21Q7Z2W9 205 aaKnown RBP8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 KLBQ86Z14 1044 aa8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 AQP12AQ8IXF9 295 aa8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 Q8TCH9 128 aa8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 SPRYD4Q8WW59 207 aaPredicted RBP8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 C22orf15Q8WYQ4 148 aa8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 SPTSSAQ969W0 71 aa8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 DACT3Q96B18 629 aaPredicted RBP8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 SLC7A6OSQ96CW6 309 aaPredicted RBP8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 LRGUKQ96M69 825 aa8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 KCNJ15Q99712 375 aa8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 COPS4Q9BT78 406 aa8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 MARCH7Q9H992 704 aa8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 CMC2Q9NRP2 79 aa8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 CENPMQ9NSP4 180 aa8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 N6AMT1Q9Y5N5 214 aa8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 SOX21Q9Y651 276 aaPredicted RBP8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 DOCK11Q5JSL3 2073 aa8.73□□□□□ -1.01
PRPF40B-204ENST00000527253 ARRDC5A6NEK1 342 aa8.72□□□□□ -1.01
PRPF40B-204ENST00000527253 RIIAD1A6NNX1 92 aa8.72□□□□□ -1.01
PRPF40B-204ENST00000527253 FAM20BO75063 409 aa8.72□□□□□ -1.01
PRPF40B-204ENST00000527253 PTBP3O95758 552 aaKnown RBP8.72□□□□□ -1.01
PRPF40B-204ENST00000527253 PAX8Q06710 450 aa8.72□□□□□ -1.01
PRPF40B-204ENST00000527253 EIF2B1Q14232 305 aaKnown RBP8.72□□□□□ -1.01
PRPF40B-204ENST00000527253 GINS1Q14691 196 aa8.72□□□□□ -1.01
PRPF40B-204ENST00000527253 OR8G1Q15617 311 aa8.72□□□□□ -1.01
PRPF40B-204ENST00000527253 USP43Q70EL4 1123 aa8.72□□□□□ -1.01
PRPF40B-204ENST00000527253 TRPM8Q7Z2W7 1104 aa8.72□□□□□ -1.01
PRPF40B-204ENST00000527253 DPY19L4Q7Z388 723 aa8.72□□□□□ -1.01
PRPF40B-204ENST00000527253 TIGD4Q8IY51 512 aa8.72□□□□□ -1.01
PRPF40B-204ENST00000527253 BCL6BQ8N143 479 aaPredicted RBP8.72□□□□□ -1.01
PRPF40B-204ENST00000527253 MUC20Q8N307 709 aaPredicted RBP8.72□□□□□ -1.01
PRPF40B-204ENST00000527253 CELF2-AS1Q8N7Q2 184 aa8.72□□□□□ -1.01
PRPF40B-204ENST00000527253 ZDHHC22Q8N966 263 aa8.72□□□□□ -1.01
PRPF40B-204ENST00000527253 OR6K6Q8NGW6 343 aa8.72□□□□□ -1.01
PRPF40B-204ENST00000527253 ZNF418Q8TF45 676 aaPredicted RBP8.72□□□□□ -1.01
PRPF40B-204ENST00000527253 ZFAND2BQ8WV99 257 aa8.72□□□□□ -1.01
PRPF40B-204ENST00000527253 POP5Q969H6 163 aaKnown RBP8.72□□□□□ -1.01
PRPF40B-204ENST00000527253 SGK3Q96BR1 496 aa8.72□□□□□ -1.01
PRPF40B-204ENST00000527253 ABHD6Q9BV23 337 aa8.72□□□□□ -1.01
PRPF40B-204ENST00000527253 PPP1R3EQ9H7J1 279 aa8.72□□□□□ -1.01
PRPF40B-204ENST00000527253 UFSP2Q9NUQ7 469 aa8.72□□□□□ -1.01
PRPF40B-204ENST00000527253 PDP1Q9P0J1 537 aaPredicted RBP8.72□□□□□ -1.01
PRPF40B-204ENST00000527253 ZNF319Q9P2F9 582 aa8.72□□□□□ -1.01
PRPF40B-204ENST00000527253 ZNF69Q9UC07 566 aa8.72□□□□□ -1.01
PRPF40B-204ENST00000527253 AUP1Q9Y679 476 aa8.72□□□□□ -1.01
PRPF40B-204ENST00000527253 TCRBV3S1A0A5B6 114 aa8.71□□□□□ -1.02
PRPF40B-204ENST00000527253 GGT3PA6NGU5 568 aa8.71□□□□□ -1.02
PRPF40B-204ENST00000527253 H3BN98 237 aa8.71□□□□□ -1.02
PRPF40B-204ENST00000527253 TNFRSF13BO14836 293 aaPredicted RBP8.71□□□□□ -1.02
PRPF40B-204ENST00000527253 GLCEO94923 617 aa8.71□□□□□ -1.02
PRPF40B-204ENST00000527253 FSTL3O95633 263 aa8.71□□□□□ -1.02
PRPF40B-204ENST00000527253 IFNGP01579 166 aa8.71□□□□□ -1.02
PRPF40B-204ENST00000527253 RPS2P15880 293 aaKnown RBP8.71□□□□□ -1.02
PRPF40B-204ENST00000527253 POU1F1P28069 291 aa8.71□□□□□ -1.02
PRPF40B-204ENST00000527253 GSTT1P30711 240 aa8.71□□□□□ -1.02
PRPF40B-204ENST00000527253 GK3PQ14409 553 aa8.71□□□□□ -1.02
PRPF40B-204ENST00000527253 TAF13Q15543 124 aa8.71□□□□□ -1.02
PRPF40B-204ENST00000527253 KLHL12Q53G59 568 aa8.71□□□□□ -1.02
PRPF40B-204ENST00000527253 ESCO2Q56NI9 601 aa8.71□□□□□ -1.02
PRPF40B-204ENST00000527253 ZNF841Q6ZN19 808 aa8.71□□□□□ -1.02
PRPF40B-204ENST00000527253 ZNF826PQ6ZT77 177 aa8.71□□□□□ -1.02
PRPF40B-204ENST00000527253 ERI1Q8IV48 349 aaKnown RBP8.71□□□□□ -1.02
PRPF40B-204ENST00000527253 C11orf53Q8IXP5 236 aa8.71□□□□□ -1.02
PRPF40B-204ENST00000527253 TEX29Q8N6K0 151 aa8.71□□□□□ -1.02
PRPF40B-204ENST00000527253 OR56B2PQ8NGI1 322 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms