RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 LRRC28Q86X40 367 aaPredicted RBP17.39■□□□□ 0.37
VPS28-206ENST00000526734 ERI1Q8IV48 349 aaKnown RBP17.39■□□□□ 0.37
VPS28-206ENST00000526734 HS3ST5Q8IZT8 346 aa17.39■□□□□ 0.37
VPS28-206ENST00000526734 ZNF454Q8N9F8 522 aa17.39■□□□□ 0.37
VPS28-206ENST00000526734 OR4M2Q8NGB6 313 aa17.39■□□□□ 0.37
VPS28-206ENST00000526734 OR5K1Q8NHB7 308 aa17.39■□□□□ 0.37
VPS28-206ENST00000526734 SPATA3Q8NHX4 192 aa17.39■□□□□ 0.37
VPS28-206ENST00000526734 RNF133Q8WVZ7 376 aa17.39■□□□□ 0.37
VPS28-206ENST00000526734 UTP4Q969X6 686 aaKnown RBP17.39■□□□□ 0.37
VPS28-206ENST00000526734 REPIN1Q9BWE0 567 aaKnown RBP17.39■□□□□ 0.37
VPS28-206ENST00000526734 G6PC2Q9NQR9 355 aa17.39■□□□□ 0.37
VPS28-206ENST00000526734 PAPOLBQ9NRJ5 636 aaKnown RBP17.39■□□□□ 0.37
VPS28-206ENST00000526734 PCDHB10Q9UN67 800 aa17.39■□□□□ 0.37
VPS28-206ENST00000526734 PPIAL4EA0A075B759 164 aa17.38■□□□□ 0.37
VPS28-206ENST00000526734 PPIAL4CA0A0B4J2A2 164 aa17.38■□□□□ 0.37
VPS28-206ENST00000526734 CD300LBA8K4G0 201 aa17.38■□□□□ 0.37
VPS28-206ENST00000526734 PPIAL4DF5H284 164 aa17.38■□□□□ 0.37
VPS28-206ENST00000526734 TMEM178BH3BS89 294 aa17.38■□□□□ 0.37
VPS28-206ENST00000526734 PHF1O43189 567 aaPredicted RBP17.38■□□□□ 0.37
VPS28-206ENST00000526734 MLNRO43193 412 aa17.38■□□□□ 0.37
VPS28-206ENST00000526734 PLPP2O43688 288 aa17.38■□□□□ 0.37
VPS28-206ENST00000526734 FOXH1O75593 365 aa17.38■□□□□ 0.37
VPS28-206ENST00000526734 SBK2P0C263 348 aa17.38■□□□□ 0.37
VPS28-206ENST00000526734 PPIAL4FP0DN26 164 aa17.38■□□□□ 0.37
VPS28-206ENST00000526734 FCGR1AP12314 374 aa17.38■□□□□ 0.37
VPS28-206ENST00000526734 PRKACGP22612 351 aa17.38■□□□□ 0.37
VPS28-206ENST00000526734 HSD11B1P28845 292 aa17.38■□□□□ 0.37
VPS28-206ENST00000526734 MDH2P40926 338 aaKnown RBP17.38■□□□□ 0.37
VPS28-206ENST00000526734 CD200P41217 278 aa17.38■□□□□ 0.37
VPS28-206ENST00000526734 PRKXP51817 358 aa17.38■□□□□ 0.37
VPS28-206ENST00000526734 SNAI3Q3KNW1 292 aa17.38■□□□□ 0.37
VPS28-206ENST00000526734 PLBD1Q6P4A8 553 aa17.38■□□□□ 0.37
VPS28-206ENST00000526734 FAHD1Q6P587 224 aa17.38■□□□□ 0.37
VPS28-206ENST00000526734 DPY19L4Q7Z388 723 aa17.38■□□□□ 0.37
VPS28-206ENST00000526734 KLBQ86Z14 1044 aa17.38■□□□□ 0.37
VPS28-206ENST00000526734 TIGD4Q8IY51 512 aa17.38■□□□□ 0.37
VPS28-206ENST00000526734 RFLNBQ8N5W9 214 aa17.38■□□□□ 0.37
VPS28-206ENST00000526734 SIGLEC11Q96RL6 698 aa17.38■□□□□ 0.37
VPS28-206ENST00000526734 ABHD6Q9BV23 337 aa17.38■□□□□ 0.37
VPS28-206ENST00000526734 OR51V1Q9H2C8 321 aa17.38■□□□□ 0.37
VPS28-206ENST00000526734 MED20Q9H944 212 aa17.38■□□□□ 0.37
VPS28-206ENST00000526734 NTN4Q9HB63 628 aa17.38■□□□□ 0.37
VPS28-206ENST00000526734 PATZ1Q9HBE1 687 aaKnown RBP17.38■□□□□ 0.37
VPS28-206ENST00000526734 UBAP1Q9NZ09 502 aa17.38■□□□□ 0.37
VPS28-206ENST00000526734 GGT3PA6NGU5 568 aa17.37■□□□□ 0.37
VPS28-206ENST00000526734 RNF212BA8MTL3 300 aa17.37■□□□□ 0.37
VPS28-206ENST00000526734 GMDSO60547 372 aa17.37■□□□□ 0.37
VPS28-206ENST00000526734 TIPRLO75663 272 aa17.37■□□□□ 0.37
VPS28-206ENST00000526734 CFL1P23528 166 aaKnown RBP17.37■□□□□ 0.37
VPS28-206ENST00000526734 DDOSTP39656 456 aa17.37■□□□□ 0.37
VPS28-206ENST00000526734 ESRRGP62508 458 aa17.37■□□□□ 0.37
VPS28-206ENST00000526734 MZT1Q08AG7 82 aa17.37■□□□□ 0.37
VPS28-206ENST00000526734 ATP6AP1Q15904 470 aa17.37■□□□□ 0.37
VPS28-206ENST00000526734 C1orf146Q5VVC0 180 aa17.37■□□□□ 0.37
VPS28-206ENST00000526734 SPERTQ8NA61 448 aa17.37■□□□□ 0.37
VPS28-206ENST00000526734 OR52H1Q8NGJ2 320 aa17.37■□□□□ 0.37
VPS28-206ENST00000526734 SPSB4Q96A44 273 aa17.37■□□□□ 0.37
VPS28-206ENST00000526734 DUS3LQ96G46 650 aaKnown RBP17.37■□□□□ 0.37
VPS28-206ENST00000526734 DCAF16Q9NXF7 216 aa17.37■□□□□ 0.37
VPS28-206ENST00000526734 MRPL15Q9P015 296 aaKnown RBP17.37■□□□□ 0.37
VPS28-206ENST00000526734 ENOPH1Q9UHY7 261 aa17.37■□□□□ 0.37
VPS28-206ENST00000526734 F5H5P2 479 aa17.36■□□□□ 0.37
VPS28-206ENST00000526734 FASP25445 335 aa17.36■□□□□ 0.37
VPS28-206ENST00000526734 CX3CR1P49238 355 aa17.36■□□□□ 0.37
VPS28-206ENST00000526734 CRISP1P54107 249 aa17.36■□□□□ 0.37
VPS28-206ENST00000526734 ZNF92Q03936 586 aa17.36■□□□□ 0.37
VPS28-206ENST00000526734 ZMYND11Q15326 602 aa17.36■□□□□ 0.37
VPS28-206ENST00000526734 OR8G1Q15617 311 aa17.36■□□□□ 0.37
VPS28-206ENST00000526734 GLYATL3Q5SZD4 288 aa17.36■□□□□ 0.37
VPS28-206ENST00000526734 DCAF12L2Q5VW00 463 aa17.36■□□□□ 0.37
VPS28-206ENST00000526734 LIPNQ5VXI9 398 aa17.36■□□□□ 0.37
VPS28-206ENST00000526734 FAHD2BQ6P2I3 314 aaPredicted RBP17.36■□□□□ 0.37
VPS28-206ENST00000526734 PLPP7Q8NBV4 271 aa17.36■□□□□ 0.37
VPS28-206ENST00000526734 OR11L1Q8NGX0 322 aa17.36■□□□□ 0.37
VPS28-206ENST00000526734 OTOSQ8NHW6 89 aa17.36■□□□□ 0.37
VPS28-206ENST00000526734 Q8TCH9 128 aa17.36■□□□□ 0.37
VPS28-206ENST00000526734 FAHD2AQ96GK7 314 aa17.36■□□□□ 0.37
VPS28-206ENST00000526734 METRNQ9UJH8 293 aa17.36■□□□□ 0.37
VPS28-206ENST00000526734 H0YL77 283 aa17.35■□□□□ 0.37
VPS28-206ENST00000526734 CIB2O75838 187 aa17.35■□□□□ 0.37
VPS28-206ENST00000526734 LYNP07948 512 aa17.35■□□□□ 0.37
VPS28-206ENST00000526734 IRF2P14316 349 aa17.35■□□□□ 0.37
VPS28-206ENST00000526734 OPRL1P41146 370 aa17.35■□□□□ 0.37
VPS28-206ENST00000526734 SNCBQ16143 134 aa17.35■□□□□ 0.37
VPS28-206ENST00000526734 KLHL12Q53G59 568 aa17.35■□□□□ 0.37
VPS28-206ENST00000526734 CPOQ8IVL8 374 aa17.35■□□□□ 0.37
VPS28-206ENST00000526734 OR2AE1Q8NHA4 323 aa17.35■□□□□ 0.37
VPS28-206ENST00000526734 ZMYND19Q96E35 227 aaPredicted RBP17.35■□□□□ 0.37
VPS28-206ENST00000526734 ADAT1Q9BUB4 502 aaKnown RBP17.35■□□□□ 0.37
VPS28-206ENST00000526734 RGCCQ9H4X1 137 aa17.35■□□□□ 0.37
VPS28-206ENST00000526734 NIPAL2Q9H841 368 aa17.35■□□□□ 0.37
VPS28-206ENST00000526734 POLR3KQ9Y2Y1 108 aaPredicted RBP17.35■□□□□ 0.37
VPS28-206ENST00000526734 AP4S1Q9Y587 144 aa17.35■□□□□ 0.37
VPS28-206ENST00000526734 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.34■□□□□ 0.37
VPS28-206ENST00000526734 A8MXK9 166 aa17.34■□□□□ 0.37
VPS28-206ENST00000526734 F5H0A9 414 aaPredicted RBP17.34■□□□□ 0.37
VPS28-206ENST00000526734 PTBP3O95758 552 aaKnown RBP17.34■□□□□ 0.37
VPS28-206ENST00000526734 HLA-DPB1P04440 258 aa17.34■□□□□ 0.37
VPS28-206ENST00000526734 ANXA2P07355 339 aaKnown RBP17.34■□□□□ 0.37
VPS28-206ENST00000526734 H2BFMP0C1H6 154 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms