RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 EGR3Q06889 387 aa11.06□□□□□ -0.64
SMPD1-202ENST00000526280 MALLQ13021 153 aa11.06□□□□□ -0.64
SMPD1-202ENST00000526280 HLXQ14774 488 aaPredicted RBP11.06□□□□□ -0.64
SMPD1-202ENST00000526280 TESK1Q15569 626 aa11.06□□□□□ -0.64
SMPD1-202ENST00000526280 SMN1Q16637 294 aaKnown RBP11.06□□□□□ -0.64
SMPD1-202ENST00000526280 THAP5Q7Z6K1 395 aa11.06□□□□□ -0.64
SMPD1-202ENST00000526280 C8orf59Q8N0T1 100 aaPredicted RBP11.06□□□□□ -0.64
SMPD1-202ENST00000526280 ZCCHC24Q8N2G6 241 aaKnown RBP11.06□□□□□ -0.64
SMPD1-202ENST00000526280 OR10H4Q8NGA5 316 aa11.06□□□□□ -0.64
SMPD1-202ENST00000526280 CNIH3Q8TBE1 160 aa11.06□□□□□ -0.64
SMPD1-202ENST00000526280 LGALS12Q96DT0 336 aa11.06□□□□□ -0.64
SMPD1-202ENST00000526280 TBX5Q99593 518 aa11.06□□□□□ -0.64
SMPD1-202ENST00000526280 VRK1Q99986 396 aaPredicted RBP11.06□□□□□ -0.64
SMPD1-202ENST00000526280 TTTY10Q9BZA0 68 aa11.06□□□□□ -0.64
SMPD1-202ENST00000526280 MS4A5Q9H3V2 200 aa11.06□□□□□ -0.64
SMPD1-202ENST00000526280 SP140LQ9H930 580 aa11.06□□□□□ -0.64
SMPD1-202ENST00000526280 AMBNQ9NP70 447 aa11.06□□□□□ -0.64
SMPD1-202ENST00000526280 DYNLRB1Q9NP97 96 aa11.06□□□□□ -0.64
SMPD1-202ENST00000526280 MRPS18AQ9NVS2 196 aaKnown RBP11.06□□□□□ -0.64
SMPD1-202ENST00000526280 GPR160Q9UJ42 338 aa11.06□□□□□ -0.64
SMPD1-202ENST00000526280 RPL36Q9Y3U8 105 aaKnown RBP11.06□□□□□ -0.64
SMPD1-202ENST00000526280 IGHV4-39P01824 125 aa11.05□□□□□ -0.64
SMPD1-202ENST00000526280 DCTDP32321 178 aa11.05□□□□□ -0.64
SMPD1-202ENST00000526280 MMP15P51511 669 aa11.05□□□□□ -0.64
SMPD1-202ENST00000526280 RIDAP52758 137 aaKnown RBP11.05□□□□□ -0.64
SMPD1-202ENST00000526280 CDK5R2Q13319 367 aa11.05□□□□□ -0.64
SMPD1-202ENST00000526280 GK2Q14410 553 aaPredicted RBP11.05□□□□□ -0.64
SMPD1-202ENST00000526280 NKPD1Q17RQ9 610 aa11.05□□□□□ -0.64
SMPD1-202ENST00000526280 ALKBH6Q3KRA9 238 aa11.05□□□□□ -0.64
SMPD1-202ENST00000526280 RBM48Q5RL73 367 aaKnown RBP11.05□□□□□ -0.64
SMPD1-202ENST00000526280 ZNF684Q5T5D7 378 aa11.05□□□□□ -0.64
SMPD1-202ENST00000526280 PRSS57Q6UWY2 283 aa11.05□□□□□ -0.64
SMPD1-202ENST00000526280 FAM57BQ71RH2 274 aa11.05□□□□□ -0.64
SMPD1-202ENST00000526280 SSX6Q7RTT6 188 aa11.05□□□□□ -0.64
SMPD1-202ENST00000526280 OR52H1Q8NGJ2 320 aa11.05□□□□□ -0.64
SMPD1-202ENST00000526280 FBLIM1Q8WUP2 373 aa11.05□□□□□ -0.64
SMPD1-202ENST00000526280 SORCS2Q96PQ0 1159 aa11.05□□□□□ -0.64
SMPD1-202ENST00000526280 RAB1BQ9H0U4 201 aa11.05□□□□□ -0.64
SMPD1-202ENST00000526280 MRM2Q9UI43 246 aaKnown RBP11.05□□□□□ -0.64
SMPD1-202ENST00000526280 PURGQ9UJV8 347 aaKnown RBP11.05□□□□□ -0.64
SMPD1-202ENST00000526280 IKZF2Q9UKS7 526 aa11.05□□□□□ -0.64
SMPD1-202ENST00000526280 PCDHGB1Q9Y5G3 927 aa11.05□□□□□ -0.64
SMPD1-202ENST00000526280 N6AMT1Q9Y5N5 214 aa11.05□□□□□ -0.64
SMPD1-202ENST00000526280 CEPT1Q9Y6K0 416 aa11.05□□□□□ -0.64
SMPD1-202ENST00000526280 CCDC160A6NGH7 325 aa11.04□□□□□ -0.64
SMPD1-202ENST00000526280 ACOD1A6NK06 481 aa11.04□□□□□ -0.64
SMPD1-202ENST00000526280 MAGEB4O15481 346 aaPredicted RBP11.04□□□□□ -0.64
SMPD1-202ENST00000526280 TIMM8AO60220 97 aaPredicted RBP11.04□□□□□ -0.64
SMPD1-202ENST00000526280 SULT1C4O75897 302 aa11.04□□□□□ -0.64
SMPD1-202ENST00000526280 F12P00748 615 aaPredicted RBP11.04□□□□□ -0.64
SMPD1-202ENST00000526280 ANXA2P07355 339 aaKnown RBP11.04□□□□□ -0.64
SMPD1-202ENST00000526280 NAT2P11245 290 aa11.04□□□□□ -0.64
SMPD1-202ENST00000526280 LIPAP38571 399 aa11.04□□□□□ -0.64
SMPD1-202ENST00000526280 EFNA4P52798 201 aa11.04□□□□□ -0.64
SMPD1-202ENST00000526280 PSMA6P60900 246 aaKnown RBP11.04□□□□□ -0.64
SMPD1-202ENST00000526280 ACTC1P68032 377 aa11.04□□□□□ -0.64
SMPD1-202ENST00000526280 ACTA1P68133 377 aa11.04□□□□□ -0.64
SMPD1-202ENST00000526280 ZNF85Q03923 595 aa11.04□□□□□ -0.64
SMPD1-202ENST00000526280 ZNF92Q03936 586 aa11.04□□□□□ -0.64
SMPD1-202ENST00000526280 RAB40BQ12829 278 aa11.04□□□□□ -0.64
SMPD1-202ENST00000526280 KLHL22Q53GT1 634 aa11.04□□□□□ -0.64
SMPD1-202ENST00000526280 GLYATL3Q5SZD4 288 aa11.04□□□□□ -0.64
SMPD1-202ENST00000526280 SHEQ5VZ18 495 aa11.04□□□□□ -0.64
SMPD1-202ENST00000526280 OR2T2Q6IF00 324 aa11.04□□□□□ -0.64
SMPD1-202ENST00000526280 KRTAP1-3Q8IUG1 177 aa11.04□□□□□ -0.64
SMPD1-202ENST00000526280 ACBD7Q8N6N7 88 aa11.04□□□□□ -0.64
SMPD1-202ENST00000526280 SNX33Q8WV41 574 aa11.04□□□□□ -0.64
SMPD1-202ENST00000526280 SPSB4Q96A44 273 aa11.04□□□□□ -0.64
SMPD1-202ENST00000526280 TMIGD2Q96BF3 282 aa11.04□□□□□ -0.64
SMPD1-202ENST00000526280 REPIN1Q9BWE0 567 aaKnown RBP11.04□□□□□ -0.64
SMPD1-202ENST00000526280 BARX1Q9HBU1 254 aaPredicted RBP11.04□□□□□ -0.64
SMPD1-202ENST00000526280 BRD7Q9NPI1 651 aa11.04□□□□□ -0.64
SMPD1-202ENST00000526280 CYSLTR2Q9NS75 346 aa11.04□□□□□ -0.64
SMPD1-202ENST00000526280 ZNF319Q9P2F9 582 aa11.04□□□□□ -0.64
SMPD1-202ENST00000526280 CGGBP1Q9UFW8 167 aaPredicted RBP11.04□□□□□ -0.64
SMPD1-202ENST00000526280 TMEM269A0A1B0GVZ9 245 aa11.03□□□□□ -0.64
SMPD1-202ENST00000526280 PLSCR5A0PG75 271 aa11.03□□□□□ -0.64
SMPD1-202ENST00000526280 DAPL1A0PJW8 107 aa11.03□□□□□ -0.64
SMPD1-202ENST00000526280 METTL15A6NJ78 407 aa11.03□□□□□ -0.64
SMPD1-202ENST00000526280 C17orf100A8MU93 164 aa11.03□□□□□ -0.64
SMPD1-202ENST00000526280 TBX1O43435 398 aa11.03□□□□□ -0.64
SMPD1-202ENST00000526280 XRCC2O43543 280 aa11.03□□□□□ -0.64
SMPD1-202ENST00000526280 SRSF10O75494 262 aaKnown RBP11.03□□□□□ -0.64
SMPD1-202ENST00000526280 FADS2O95864 444 aaKnown RBP11.03□□□□□ -0.64
SMPD1-202ENST00000526280 MT-ND5P03915 603 aa11.03□□□□□ -0.64
SMPD1-202ENST00000526280 KRT8P05787 483 aa11.03□□□□□ -0.64
SMPD1-202ENST00000526280 ERCC1P07992 297 aaPredicted RBP11.03□□□□□ -0.64
SMPD1-202ENST00000526280 SELEP16581 610 aa11.03□□□□□ -0.64
SMPD1-202ENST00000526280 ZNF81P51508 661 aa11.03□□□□□ -0.64
SMPD1-202ENST00000526280 MMP16P51512 607 aa11.03□□□□□ -0.64
SMPD1-202ENST00000526280 LSAMPQ13449 338 aa11.03□□□□□ -0.64
SMPD1-202ENST00000526280 C6orf141Q5SZD1 244 aa11.03□□□□□ -0.64
SMPD1-202ENST00000526280 LAIR2Q6ISS4 152 aa11.03□□□□□ -0.64
SMPD1-202ENST00000526280 ZNF773Q6PK81 442 aa11.03□□□□□ -0.64
SMPD1-202ENST00000526280 PGAP1Q75T13 922 aa11.03□□□□□ -0.64
SMPD1-202ENST00000526280 MRPL21Q7Z2W9 205 aaKnown RBP11.03□□□□□ -0.64
SMPD1-202ENST00000526280 GPR141Q7Z602 305 aa11.03□□□□□ -0.64
SMPD1-202ENST00000526280 OR52I1Q8NGK6 324 aa11.03□□□□□ -0.64
SMPD1-202ENST00000526280 OR2AE1Q8NHA4 323 aa11.03□□□□□ -0.64
SMPD1-202ENST00000526280 NEU4Q8WWR8 484 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms