RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 LIPFP07098 398 aa19.84■□□□□ 0.77
USP47-205ENST00000525257 NCK1P16333 377 aa19.84■□□□□ 0.77
USP47-205ENST00000525257 GSK3BP49841 420 aa19.84■□□□□ 0.77
USP47-205ENST00000525257 OR8B8Q15620 311 aa19.84■□□□□ 0.77
USP47-205ENST00000525257 KCNJ8Q15842 424 aa19.84■□□□□ 0.77
USP47-205ENST00000525257 METTL11BQ5VVY1 283 aa19.84■□□□□ 0.77
USP47-205ENST00000525257 SMARCD3Q6STE5 483 aa19.84■□□□□ 0.77
USP47-205ENST00000525257 MRPL21Q7Z2W9 205 aaKnown RBP19.84■□□□□ 0.77
USP47-205ENST00000525257 TBC1D15Q8TC07 691 aa19.84■□□□□ 0.77
USP47-205ENST00000525257 DYRK2Q92630 601 aa19.84■□□□□ 0.77
USP47-205ENST00000525257 LHX4Q969G2 390 aa19.84■□□□□ 0.77
USP47-205ENST00000525257 NMNAT3Q96T66 252 aa19.84■□□□□ 0.77
USP47-205ENST00000525257 PKP2Q99959 881 aa19.84■□□□□ 0.77
USP47-205ENST00000525257 RBM4BQ9BQ04 359 aaKnown RBP19.84■□□□□ 0.77
USP47-205ENST00000525257 ADAT1Q9BUB4 502 aaKnown RBP19.84■□□□□ 0.77
USP47-205ENST00000525257 TRIM15Q9C019 465 aa19.84■□□□□ 0.77
USP47-205ENST00000525257 RASSF4Q9H2L5 321 aa19.84■□□□□ 0.77
USP47-205ENST00000525257 FAM32AQ9Y421 112 aaKnown RBP19.84■□□□□ 0.77
USP47-205ENST00000525257 GPR137BO60478 399 aa19.83■□□□□ 0.77
USP47-205ENST00000525257 IGHV4-59P01825 116 aa19.83■□□□□ 0.77
USP47-205ENST00000525257 ECH1Q13011 328 aa19.83■□□□□ 0.77
USP47-205ENST00000525257 ASPHD2Q6ICH7 369 aa19.83■□□□□ 0.77
USP47-205ENST00000525257 PNLDC1Q8NA58 520 aaKnown RBP19.83■□□□□ 0.77
USP47-205ENST00000525257 OR2AJ1Q8NGZ0 328 aa19.83■□□□□ 0.77
USP47-205ENST00000525257 FANK1Q8TC84 345 aa19.83■□□□□ 0.77
USP47-205ENST00000525257 KRCC1Q9NPI7 259 aaPredicted RBP19.83■□□□□ 0.77
USP47-205ENST00000525257 PNRC2Q9NPJ4 139 aaKnown RBP19.83■□□□□ 0.77
USP47-205ENST00000525257 RPRD1BQ9NQG5 326 aaKnown RBP19.83■□□□□ 0.77
USP47-205ENST00000525257 NDUFAF4Q9P032 175 aa19.83■□□□□ 0.77
USP47-205ENST00000525257 IGHV1-69DA0A0B4J2H0 117 aa19.82■□□□□ 0.76
USP47-205ENST00000525257 DIRAS1O95057 198 aa19.82■□□□□ 0.76
USP47-205ENST00000525257 RENP00797 406 aa19.82■□□□□ 0.76
USP47-205ENST00000525257 IGHV1-69P01742 117 aa19.82■□□□□ 0.76
USP47-205ENST00000525257 RPL15P61313 204 aaKnown RBP19.82■□□□□ 0.76
USP47-205ENST00000525257 SLC36A3Q495N2 470 aa19.82■□□□□ 0.76
USP47-205ENST00000525257 HDXQ7Z353 690 aa19.82■□□□□ 0.76
USP47-205ENST00000525257 OR4K13Q8NH42 304 aa19.82■□□□□ 0.76
USP47-205ENST00000525257 OR52J3Q8NH60 311 aa19.82■□□□□ 0.76
USP47-205ENST00000525257 LINC01006Q8NI28 216 aa19.82■□□□□ 0.76
USP47-205ENST00000525257 SIRPDQ9H106 197 aa19.82■□□□□ 0.76
USP47-205ENST00000525257 FN3KQ9H479 309 aa19.82■□□□□ 0.76
USP47-205ENST00000525257 CYB5R1Q9UHQ9 305 aa19.82■□□□□ 0.76
USP47-205ENST00000525257 NOP16Q9Y3C1 178 aaKnown RBP19.82■□□□□ 0.76
USP47-205ENST00000525257 A0A0U1RQK1 487 aa19.81■□□□□ 0.76
USP47-205ENST00000525257 CD300LBA8K4G0 201 aa19.81■□□□□ 0.76
USP47-205ENST00000525257 HLA-DQA2P01906 255 aa19.81■□□□□ 0.76
USP47-205ENST00000525257 GYPAP02724 150 aa19.81■□□□□ 0.76
USP47-205ENST00000525257 HIST1H1CP16403 213 aaKnown RBP19.81■□□□□ 0.76
USP47-205ENST00000525257 RHCEP18577 417 aa19.81■□□□□ 0.76
USP47-205ENST00000525257 TPTEP56180 551 aa19.81■□□□□ 0.76
USP47-205ENST00000525257 PDZD9Q8IXQ8 264 aa19.81■□□□□ 0.76
USP47-205ENST00000525257 SCCPDHQ8NBX0 429 aa19.81■□□□□ 0.76
USP47-205ENST00000525257 RP9Q8TA86 221 aaKnown RBP19.81■□□□□ 0.76
USP47-205ENST00000525257 SLC22A4Q9H015 551 aa19.81■□□□□ 0.76
USP47-205ENST00000525257 TRAV38-1A0A0B4J264 116 aa19.8■□□□□ 0.76
USP47-205ENST00000525257 OOEPA6NGQ2 149 aa19.8■□□□□ 0.76
USP47-205ENST00000525257 M0R135 149 aa19.8■□□□□ 0.76
USP47-205ENST00000525257 SLC22A2O15244 555 aa19.8■□□□□ 0.76
USP47-205ENST00000525257 GGT2P36268 569 aa19.8■□□□□ 0.76
USP47-205ENST00000525257 ARF6P62330 175 aa19.8■□□□□ 0.76
USP47-205ENST00000525257 TAF9Q16594 264 aa19.8■□□□□ 0.76
USP47-205ENST00000525257 SNAI3Q3KNW1 292 aa19.8■□□□□ 0.76
USP47-205ENST00000525257 OR2AE1Q8NHA4 323 aa19.8■□□□□ 0.76
USP47-205ENST00000525257 ZNF799Q96GE5 643 aa19.8■□□□□ 0.76
USP47-205ENST00000525257 KCTD14Q9BQ13 255 aaPredicted RBP19.8■□□□□ 0.76
USP47-205ENST00000525257 OR52D1Q9H346 318 aa19.8■□□□□ 0.76
USP47-205ENST00000525257 TRIM36Q9NQ86 728 aa19.8■□□□□ 0.76
USP47-205ENST00000525257 C1orf123Q9NWV4 160 aa19.8■□□□□ 0.76
USP47-205ENST00000525257 GMDSO60547 372 aa19.79■□□□□ 0.76
USP47-205ENST00000525257 FCN3O75636 299 aa19.79■□□□□ 0.76
USP47-205ENST00000525257 CLPXO76031 633 aa19.79■□□□□ 0.76
USP47-205ENST00000525257 PTBP3O95758 552 aaKnown RBP19.79■□□□□ 0.76
USP47-205ENST00000525257 COX4I1P13073 169 aa19.79■□□□□ 0.76
USP47-205ENST00000525257 ANOS1P23352 680 aa19.79■□□□□ 0.76
USP47-205ENST00000525257 SLC6A6P31641 620 aa19.79■□□□□ 0.76
USP47-205ENST00000525257 PROK1P58294 105 aa19.79■□□□□ 0.76
USP47-205ENST00000525257 ZNF92Q03936 586 aa19.79■□□□□ 0.76
USP47-205ENST00000525257 RFX4Q33E94 735 aa19.79■□□□□ 0.76
USP47-205ENST00000525257 ZNF826PQ6ZT77 177 aa19.79■□□□□ 0.76
USP47-205ENST00000525257 BTN2A1Q7KYR7 527 aa19.79■□□□□ 0.76
USP47-205ENST00000525257 ZBTB46Q86UZ6 589 aa19.79■□□□□ 0.76
USP47-205ENST00000525257 C1QL4Q86Z23 238 aa19.79■□□□□ 0.76
USP47-205ENST00000525257 SDR9C7Q8NEX9 313 aa19.79■□□□□ 0.76
USP47-205ENST00000525257 MAP6Q96JE9 813 aa19.79■□□□□ 0.76
USP47-205ENST00000525257 HOPXQ9BPY8 73 aaPredicted RBP19.79■□□□□ 0.76
USP47-205ENST00000525257 IFT27Q9BW83 186 aa19.79■□□□□ 0.76
USP47-205ENST00000525257 VIPAS39Q9H9C1 493 aa19.79■□□□□ 0.76
USP47-205ENST00000525257 TCF7L1Q9HCS4 588 aa19.79■□□□□ 0.76
USP47-205ENST00000525257 GGT3PA6NGU5 568 aa19.78■□□□□ 0.76
USP47-205ENST00000525257 A6NLC8 198 aa19.78■□□□□ 0.76
USP47-205ENST00000525257 NDUFA2O43678 99 aa19.78■□□□□ 0.76
USP47-205ENST00000525257 OR10H3O60404 316 aa19.78■□□□□ 0.76
USP47-205ENST00000525257 TSPAN15O95858 294 aa19.78■□□□□ 0.76
USP47-205ENST00000525257 GRPP07492 148 aa19.78■□□□□ 0.76
USP47-205ENST00000525257 IER3P46695 156 aa19.78■□□□□ 0.76
USP47-205ENST00000525257 POU4F2Q12837 409 aa19.78■□□□□ 0.76
USP47-205ENST00000525257 C8orf82Q6P1X6 216 aaPredicted RBP19.78■□□□□ 0.76
USP47-205ENST00000525257 LDLRAD3Q86YD5 345 aa19.78■□□□□ 0.76
USP47-205ENST00000525257 FAM90A1Q86YD7 464 aa19.78■□□□□ 0.76
USP47-205ENST00000525257 FAM86B1Q8N7N1 296 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms