RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 C21orf59P57076 290 aa2.05□□□□□ -2.08
CD44-215ENST00000525241 RGS8P57771 180 aaPredicted RBP2.05□□□□□ -2.08
CD44-215ENST00000525241 IDI1Q13907 227 aa2.05□□□□□ -2.08
CD44-215ENST00000525241 SPINT4Q6UDR6 99 aa2.05□□□□□ -2.08
CD44-215ENST00000525241 SPESP1Q6UW49 350 aa2.05□□□□□ -2.08
CD44-215ENST00000525241 TTC29Q8NA56 475 aaPredicted RBP2.05□□□□□ -2.08
CD44-215ENST00000525241 OR1J4Q8NGS1 313 aa2.05□□□□□ -2.08
CD44-215ENST00000525241 KLF14Q8TD94 323 aaPredicted RBP2.05□□□□□ -2.08
CD44-215ENST00000525241 BTN2A3PQ96KV6 586 aa2.05□□□□□ -2.08
CD44-215ENST00000525241 C18orf15Q96N68 181 aa2.05□□□□□ -2.08
CD44-215ENST00000525241 XPO6Q96QU8 1125 aaKnown RBP2.05□□□□□ -2.08
CD44-215ENST00000525241 PANX1Q96RD7 426 aa2.05□□□□□ -2.08
CD44-215ENST00000525241 CDX2Q99626 313 aaPredicted RBP2.05□□□□□ -2.08
CD44-215ENST00000525241 CHCHD7Q9BUK0 85 aa2.05□□□□□ -2.08
CD44-215ENST00000525241 FRMD8P1Q9BZ68 369 aaPredicted RBP2.05□□□□□ -2.08
CD44-215ENST00000525241 ZYG11BQ9C0D3 744 aa2.05□□□□□ -2.08
CD44-215ENST00000525241 LHX5Q9H2C1 402 aa2.05□□□□□ -2.08
CD44-215ENST00000525241 DHX35Q9H5Z1 703 aaKnown RBP2.05□□□□□ -2.08
CD44-215ENST00000525241 LYARQ9NX58 379 aaKnown RBP2.05□□□□□ -2.08
CD44-215ENST00000525241 SLC39A1Q9NY26 324 aa2.05□□□□□ -2.08
CD44-215ENST00000525241 PTTG3PQ9NZH4 202 aa2.05□□□□□ -2.08
CD44-215ENST00000525241 COMMD3-BMI1R4GMX3 469 aa2.05□□□□□ -2.08
CD44-215ENST00000525241 ADGRL1O94910 1474 aa2.05□□□□□ -2.08
CD44-215ENST00000525241 IGHV1-3A0A0C4DH29 117 aa2.04□□□□□ -2.08
CD44-215ENST00000525241 A0A1B0GUH1 482 aa2.04□□□□□ -2.08
CD44-215ENST00000525241 C16orf90A8MZG2 172 aa2.04□□□□□ -2.08
CD44-215ENST00000525241 TAAR5O14804 337 aa2.04□□□□□ -2.08
CD44-215ENST00000525241 PLIN3O60664 434 aa2.04□□□□□ -2.08
CD44-215ENST00000525241 SERPINB7O75635 380 aa2.04□□□□□ -2.08
CD44-215ENST00000525241 HPRT1P00492 218 aa2.04□□□□□ -2.08
CD44-215ENST00000525241 LHBP01229 141 aa2.04□□□□□ -2.08
CD44-215ENST00000525241 HBE1P02100 147 aa2.04□□□□□ -2.08
CD44-215ENST00000525241 PGA4P0DJD7 388 aa2.04□□□□□ -2.08
CD44-215ENST00000525241 PGA3P0DJD8 388 aa2.04□□□□□ -2.08
CD44-215ENST00000525241 PGA5P0DJD9 388 aa2.04□□□□□ -2.08
CD44-215ENST00000525241 CTRB1P17538 263 aa2.04□□□□□ -2.08
CD44-215ENST00000525241 PSMB5P28074 263 aa2.04□□□□□ -2.08
CD44-215ENST00000525241 CD70P32970 193 aa2.04□□□□□ -2.08
CD44-215ENST00000525241 TAS2R46P59540 309 aa2.04□□□□□ -2.08
CD44-215ENST00000525241 IL15RAQ13261 267 aa2.04□□□□□ -2.08
CD44-215ENST00000525241 NID2Q14112 1375 aa2.04□□□□□ -2.08
CD44-215ENST00000525241 GCSAMLQ5JQS6 135 aa2.04□□□□□ -2.08
CD44-215ENST00000525241 ANKRD12Q6UB98 2062 aa2.04□□□□□ -2.08
CD44-215ENST00000525241 FAM43BQ6ZT52 329 aaPredicted RBP2.04□□□□□ -2.08
CD44-215ENST00000525241 OR1P1Q8NH06 330 aa2.04□□□□□ -2.08
CD44-215ENST00000525241 HAUS1Q96CS2 278 aa2.04□□□□□ -2.08
CD44-215ENST00000525241 WDR34Q96EX3 536 aa2.04□□□□□ -2.08
CD44-215ENST00000525241 PRRC1Q96M27 445 aa2.04□□□□□ -2.08
CD44-215ENST00000525241 CHP1Q99653 195 aa2.04□□□□□ -2.08
CD44-215ENST00000525241 ZNF442Q9H7R0 627 aa2.04□□□□□ -2.08
CD44-215ENST00000525241 MRM3Q9HC36 420 aaKnown RBP2.04□□□□□ -2.08
CD44-215ENST00000525241 ACP6Q9NPH0 428 aa2.04□□□□□ -2.08
CD44-215ENST00000525241 CLN6Q9NWW5 311 aa2.04□□□□□ -2.08
CD44-215ENST00000525241 UBN2Q6ZU65 1347 aa2.03□□□□□ -2.08
CD44-215ENST00000525241 IGKV3D-11A0A0A0MRZ8 115 aa2.03□□□□□ -2.08
CD44-215ENST00000525241 M0R3G1 203 aa2.03□□□□□ -2.08
CD44-215ENST00000525241 GABRPO00591 440 aa2.03□□□□□ -2.08
CD44-215ENST00000525241 NME4O00746 187 aa2.03□□□□□ -2.08
CD44-215ENST00000525241 ERLIN1O75477 346 aa2.03□□□□□ -2.08
CD44-215ENST00000525241 CCNB2O95067 398 aa2.03□□□□□ -2.08
CD44-215ENST00000525241 AGTP01019 485 aa2.03□□□□□ -2.08
CD44-215ENST00000525241 UQCRFS1P47985 274 aa2.03□□□□□ -2.08
CD44-215ENST00000525241 RPS15P62841 145 aaKnown RBP2.03□□□□□ -2.08
CD44-215ENST00000525241 RBX1P62877 108 aa2.03□□□□□ -2.08
CD44-215ENST00000525241 TMEM220Q6QAJ8 160 aa2.03□□□□□ -2.08
CD44-215ENST00000525241 CENPQQ7L2Z9 268 aaPredicted RBP2.03□□□□□ -2.08
CD44-215ENST00000525241 KRTAP13-1Q8IUC0 172 aa2.03□□□□□ -2.08
CD44-215ENST00000525241 FAM81AQ8TBF8 368 aa2.03□□□□□ -2.08
CD44-215ENST00000525241 UCK2Q9BZX2 261 aa2.03□□□□□ -2.08
CD44-215ENST00000525241 FAM192AQ9GZU8 254 aa2.03□□□□□ -2.08
CD44-215ENST00000525241 RRAGDQ9NQL2 400 aaPredicted RBP2.03□□□□□ -2.08
CD44-215ENST00000525241 ZNF229Q9UJW7 825 aa2.03□□□□□ -2.08
CD44-215ENST00000525241 SIGLEC7Q9Y286 467 aa2.03□□□□□ -2.08
CD44-215ENST00000525241 SHANK1Q9Y566 2161 aa2.02□□□□□ -2.09
CD44-215ENST00000525241 CCDC169A6NNP5 214 aa2.02□□□□□ -2.09
CD44-215ENST00000525241 CHMP2AO43633 222 aa2.02□□□□□ -2.09
CD44-215ENST00000525241 CDH16O75309 829 aa2.02□□□□□ -2.09
CD44-215ENST00000525241 OXTP01178 125 aa2.02□□□□□ -2.09
CD44-215ENST00000525241 CLTAP09496 248 aa2.02□□□□□ -2.09
CD44-215ENST00000525241 STOMP27105 288 aa2.02□□□□□ -2.09
CD44-215ENST00000525241 HTR1DP28221 377 aa2.02□□□□□ -2.09
CD44-215ENST00000525241 PFN2P35080 140 aa2.02□□□□□ -2.09
CD44-215ENST00000525241 LRRC74AQ0VAA2 488 aa2.02□□□□□ -2.09
CD44-215ENST00000525241 SLC25A35Q3KQZ1 300 aa2.02□□□□□ -2.09
CD44-215ENST00000525241 KRTAP5-7Q6L8G8 165 aa2.02□□□□□ -2.09
CD44-215ENST00000525241 METAP1DQ6UB28 335 aaPredicted RBP2.02□□□□□ -2.09
CD44-215ENST00000525241 C16orf47Q6ZP98 133 aaPredicted RBP2.02□□□□□ -2.09
CD44-215ENST00000525241 C19orf18Q8NEA5 215 aa2.02□□□□□ -2.09
CD44-215ENST00000525241 OR5M1Q8NGP8 315 aa2.02□□□□□ -2.09
CD44-215ENST00000525241 GHSRQ92847 366 aa2.02□□□□□ -2.09
CD44-215ENST00000525241 CPNE4Q96A23 557 aaPredicted RBP2.02□□□□□ -2.09
CD44-215ENST00000525241 MCUR1Q96AQ8 359 aa2.02□□□□□ -2.09
CD44-215ENST00000525241 RPEQ96AT9 228 aa2.02□□□□□ -2.09
CD44-215ENST00000525241 ZFP3Q96NJ6 502 aa2.02□□□□□ -2.09
CD44-215ENST00000525241 RHOXF2Q9BQY4 288 aa2.02□□□□□ -2.09
CD44-215ENST00000525241 SLC7A5P2Q9GIP4 190 aa2.02□□□□□ -2.09
CD44-215ENST00000525241 GEMIN7Q9H840 131 aaKnown RBP2.02□□□□□ -2.09
CD44-215ENST00000525241 RCL1Q9Y2P8 373 aaKnown RBP2.02□□□□□ -2.09
CD44-215ENST00000525241 INSRP06213 1382 aa2.01□□□□□ -2.09
CD44-215ENST00000525241 KIR2DS1A0A191URI9 304 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms