RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 AZIN1O14977 448 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 SURF4O15260 269 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 ZNF749O43361 778 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 PI15O43692 258 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 DUSP11O75319 330 aaKnown RBP3.75□□□□□ -1.81
CD44-213ENST00000525209 IFNA21P01568 189 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 CRYAAP02489 173 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 TYMSP04818 313 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 CRHP06850 196 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 CTSLP07711 333 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 NHLRC4P0CG21 123 aaPredicted RBP3.75□□□□□ -1.81
CD44-213ENST00000525209 CT45A6P0DMU7 189 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 CT45A5P0DMU8 189 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 CT45A7P0DMV0 189 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 PVRP15151 417 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 SERPINA2P20848 420 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 RPS12P25398 132 aaKnown RBP3.75□□□□□ -1.81
CD44-213ENST00000525209 HTR1DP28221 377 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 SHMT2P34897 504 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 CEACAM6P40199 344 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 PTGDSP41222 190 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 ELK3P41970 407 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 TSFMP43897 325 aaKnown RBP3.75□□□□□ -1.81
CD44-213ENST00000525209 CRYBA4P53673 196 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 RPS13P62277 151 aaKnown RBP3.75□□□□□ -1.81
CD44-213ENST00000525209 KIAA0141Q14154 515 aaPredicted RBP3.75□□□□□ -1.81
CD44-213ENST00000525209 TRAM1Q15629 374 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 TRIP6Q15654 476 aaKnown RBP3.75□□□□□ -1.81
CD44-213ENST00000525209 CCDC6Q16204 474 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 CALCRLQ16602 461 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 TTLL9Q3SXZ7 439 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 CT45A1Q5HYN5 189 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 WDR25Q64LD2 544 aaPredicted RBP3.75□□□□□ -1.81
CD44-213ENST00000525209 NPSR1Q6W5P4 371 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 ZNF793Q6ZN11 406 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 GDPD3Q7L5L3 318 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 DPPA2Q7Z7J5 298 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 PIM3Q86V86 326 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 THOC6Q86W42 341 aaKnown RBP3.75□□□□□ -1.81
CD44-213ENST00000525209 LACC1Q8IV20 430 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 SLC22A15Q8IZD6 547 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 RBMXL3Q8N7X1 1067 aaKnown RBP3.75□□□□□ -1.81
CD44-213ENST00000525209 OR1L3Q8NH93 324 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 CT45A3Q8NHU0 189 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 SPATA3Q8NHX4 192 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 GATAD1Q8WUU5 269 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 APOBEC4Q8WW27 367 aaKnown RBP3.75□□□□□ -1.81
CD44-213ENST00000525209 DYRK2Q92630 601 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 TMEM56Q96MV1 263 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 SCGB3A2Q96PL1 93 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 SORCS2Q96PQ0 1159 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 OR5B12Q96R08 314 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 TBX15Q96SF7 602 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 ZNF2Q9BSG1 426 aaPredicted RBP3.75□□□□□ -1.81
CD44-213ENST00000525209 ZNF385DQ9H6B1 395 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 ZNF430Q9H8G1 570 aaPredicted RBP3.75□□□□□ -1.81
CD44-213ENST00000525209 BTNL2Q9UIR0 455 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 ASF1AQ9Y294 204 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 RPL36Q9Y3U8 105 aaKnown RBP3.75□□□□□ -1.81
CD44-213ENST00000525209 KNDC1Q76NI1 1749 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 ALS2Q96Q42 1657 aa3.75□□□□□ -1.81
CD44-213ENST00000525209 A0A1W2PPI3 338 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 A0A1W2PRG6 482 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 SMIM9A6NGZ8 99 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 ZNF724A8MTY0 619 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 ZNF814B7Z6K7 855 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 C11orf98E9PRG8 122 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 KCNK1O00180 336 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 ZNF593O00488 134 aaPredicted RBP3.74□□□□□ -1.81
CD44-213ENST00000525209 ATP6V0E1O15342 81 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 ENTPD6O75354 484 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 CNIH1O95406 144 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 CLDN14O95500 239 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 BMP15O95972 392 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 CD8AP01732 235 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 HOXC4P09017 264 aaPredicted RBP3.74□□□□□ -1.81
CD44-213ENST00000525209 LINC00614P0C842 121 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 GTF2F2P13984 249 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 ZNF250P15622 560 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 ZNF12P17014 697 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 USP6P35125 1406 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 HRH1P35367 487 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 DLX6P56179 175 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 PEX3P56589 373 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 ZNF121P58317 390 aaPredicted RBP3.74□□□□□ -1.81
CD44-213ENST00000525209 RND3P61587 244 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 AP1S1P61966 158 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 RPL24P83731 157 aaKnown RBP3.74□□□□□ -1.81
CD44-213ENST00000525209 TGFBR3Q03167 851 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 ZNF154Q13106 437 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 TFDP2Q14188 446 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 GPR18Q14330 331 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 KIR2DS3Q14952 304 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 TOMM34Q15785 309 aaPredicted RBP3.74□□□□□ -1.81
CD44-213ENST00000525209 ZBED5Q49AG3 693 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 ACER2Q5QJU3 275 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 FAM27D1Q5T7N8 215 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 LCE5AQ5TCM9 118 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 C1orf146Q5VVC0 180 aa3.74□□□□□ -1.81
CD44-213ENST00000525209 HBMQ6B0K9 141 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms