RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 ROM1Q03395 351 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 ST3GAL4Q11206 333 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 POU4F2Q12837 409 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 ECH1Q13011 328 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 MALLQ13021 153 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 TNK1Q13470 666 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 EFNB3Q15768 340 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 TIGD6Q17RP2 521 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 WDR38Q5JTN6 314 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 SLC25A30Q5SVS4 291 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 C6orf141Q5SZD1 244 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 ZNF684Q5T5D7 378 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 PRAMEF6Q5VXH4 476 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 MEDAGQ5VYS4 303 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 MBNL2Q5VZF2 373 aaKnown RBP3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 KCTD18Q6PI47 426 aaPredicted RBP3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 DRAM2Q6UX65 266 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 COLCA1Q6ZS62 124 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 PGAP1Q75T13 922 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 THAP5Q7Z6K1 395 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 KLBQ86Z14 1044 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 ZNF679Q8IYX0 411 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 BATF2Q8N1L9 274 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 ZNF786Q8N393 782 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 PRSS35Q8N3Z0 413 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 ACBD7Q8N6N7 88 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 ZNF540Q8NDQ6 660 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 SETD9Q8NE22 299 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 C19orf18Q8NEA5 215 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 OR56B2PQ8NGI1 322 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 OR2T27Q8NH04 317 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 OR10AC1Q8NH08 325 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 ZNF420Q8TAQ5 688 aaPredicted RBP3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 OR51E1Q8TCB6 317 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 NPRL2Q8WTW4 380 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 SPRYD4Q8WW59 207 aaPredicted RBP3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 ITLN1Q8WWA0 313 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 GATAD2BQ8WXI9 593 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 ASB17Q8WXJ9 295 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 RORBQ92753 470 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 YIPF5Q969M3 257 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 RNF166Q96A37 237 aaPredicted RBP3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 TRMT61AQ96FX7 289 aaKnown RBP3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 REEP6Q96HR9 211 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 Q96MF0 132 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 Q96MT0 163 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 SMR3AQ99954 134 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 WACQ9BTA9 647 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 ALG8Q9BVK2 526 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 MROQ9BYG7 248 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 PBOV1Q9GZY1 135 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 C8orf4Q9NR00 106 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 UFSP2Q9NUQ7 469 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 PAK1IP1Q9NWT1 392 aaPredicted RBP3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 ERVK13-1Q9NX77 482 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 HAO2Q9NYQ3 351 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 UBAP1Q9NZ09 502 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 ERVK-18Q9QC07 812 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 OR52A1Q9UKL2 312 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 EXOGQ9Y2C4 368 aaKnown RBP3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 RHBDD3Q9Y3P4 386 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 RPL36Q9Y3U8 105 aaKnown RBP3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 TMEM14AQ9Y6G1 99 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 PMF1-BGLAPU3KQ54 211 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 ASH1LQ9NR48 2969 aaKnown RBP3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 ALPK2Q86TB3 2170 aa3.92□□□□□ -1.78
CHMP4A-202ENST00000524955 LRBAP50851 2863 aa3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 IGHV4-30-2A0A087WSY4 118 aa3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 hCG_38984A0A1B0GV85 526 aa3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 PLSCR5A0PG75 271 aa3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 ANKRD61A6NGH8 418 aa3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 ZNF850A8MQ14 1090 aa3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 C17orf100A8MU93 164 aa3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 RNF223E7ERA6 249 aa3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 H7C1Q1 480 aa3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 H7C417 338 aa3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 SLC1A7O00341 560 aa3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 WNT9BO14905 357 aa3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 MLNRO43193 412 aa3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 ICMTO60725 284 aa3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 FADS2O95864 444 aaKnown RBP3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 TFF1P04155 84 aa3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 GRPP07492 148 aa3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 LIMS3P0CW19 117 aa3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 LIMS4P0CW20 117 aa3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 DAOP14920 347 aa3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 RAC2P15153 192 aa3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 FAHP16930 419 aa3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 KITLGP21583 273 aa3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 MYF6P23409 242 aa3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 MAP2K4P45985 399 aa3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 GSK3AP49840 483 aa3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 PPOXP50336 477 aa3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 CDH15P55291 814 aa3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 PSMA6P60900 246 aaKnown RBP3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 GMFBP60983 142 aa3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 TNFAIP6P98066 277 aaPredicted RBP3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 FAM3AP98173 230 aa3.91□□□□□ -1.78
CHMP4A-202ENST00000524955 RAB40BQ12829 278 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms