RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 TIGD4Q8IY51 512 aa5.41□□□□□ -1.54
NEDD8-203ENST00000524927 OR8B3Q8NGG8 313 aa5.41□□□□□ -1.54
NEDD8-203ENST00000524927 OR1J1Q8NGS3 322 aa5.41□□□□□ -1.54
NEDD8-203ENST00000524927 OR4C3Q8NH37 302 aa5.41□□□□□ -1.54
NEDD8-203ENST00000524927 VANGL1Q8TAA9 524 aaPredicted RBP5.41□□□□□ -1.54
NEDD8-203ENST00000524927 ZNF519Q8TB69 540 aa5.41□□□□□ -1.54
NEDD8-203ENST00000524927 C10orf82Q8WW14 230 aa5.41□□□□□ -1.54
NEDD8-203ENST00000524927 MYDGFQ969H8 173 aa5.41□□□□□ -1.54
NEDD8-203ENST00000524927 PDLIM5Q96HC4 596 aaKnown RBP5.41□□□□□ -1.54
NEDD8-203ENST00000524927 NSL1Q96IY1 281 aa5.41□□□□□ -1.54
NEDD8-203ENST00000524927 ST6GAL2Q96JF0 529 aa5.41□□□□□ -1.54
NEDD8-203ENST00000524927 ZNF681Q96N22 645 aa5.41□□□□□ -1.54
NEDD8-203ENST00000524927 SERPINB12Q96P63 405 aa5.41□□□□□ -1.54
NEDD8-203ENST00000524927 OR8B2Q96RD0 313 aa5.41□□□□□ -1.54
NEDD8-203ENST00000524927 PITX2Q99697 317 aa5.41□□□□□ -1.54
NEDD8-203ENST00000524927 ANP32EQ9BTT0 268 aa5.41□□□□□ -1.54
NEDD8-203ENST00000524927 C3orf14Q9HBI5 128 aa5.41□□□□□ -1.54
NEDD8-203ENST00000524927 BFARQ9NZS9 450 aa5.41□□□□□ -1.54
NEDD8-203ENST00000524927 TXNDC16Q9P2K2 825 aa5.41□□□□□ -1.54
NEDD8-203ENST00000524927 CLN8Q9UBY8 286 aa5.41□□□□□ -1.54
NEDD8-203ENST00000524927 DAPK2Q9UIK4 370 aa5.41□□□□□ -1.54
NEDD8-203ENST00000524927 KCNK7Q9Y2U2 307 aa5.41□□□□□ -1.54
NEDD8-203ENST00000524927 ATP6V1DQ9Y5K8 247 aa5.41□□□□□ -1.54
NEDD8-203ENST00000524927 BZW2Q9Y6E2 419 aaKnown RBP5.41□□□□□ -1.54
NEDD8-203ENST00000524927 ZNF780BQ9Y6R6 833 aa5.41□□□□□ -1.54
NEDD8-203ENST00000524927 PKD1P98161 4303 aa5.41□□□□□ -1.54
NEDD8-203ENST00000524927 NUP214P35658 2090 aaPredicted RBP5.4□□□□□ -1.54
NEDD8-203ENST00000524927 A0A1W2PQD3 144 aa5.4□□□□□ -1.54
NEDD8-203ENST00000524927 AP3B1O00203 1094 aa5.4□□□□□ -1.54
NEDD8-203ENST00000524927 BUB3O43684 328 aa5.4□□□□□ -1.54
NEDD8-203ENST00000524927 SYNGR1O43759 233 aa5.4□□□□□ -1.54
NEDD8-203ENST00000524927 NUDT14O95848 222 aa5.4□□□□□ -1.54
NEDD8-203ENST00000524927 IGHV3-13P01766 116 aa5.4□□□□□ -1.54
NEDD8-203ENST00000524927 IRF2P14316 349 aa5.4□□□□□ -1.54
NEDD8-203ENST00000524927 HSD17B3P37058 310 aa5.4□□□□□ -1.54
NEDD8-203ENST00000524927 FDFT1P37268 417 aa5.4□□□□□ -1.54
NEDD8-203ENST00000524927 DLK1P80370 383 aa5.4□□□□□ -1.54
NEDD8-203ENST00000524927 ZNF415Q09FC8 603 aa5.4□□□□□ -1.54
NEDD8-203ENST00000524927 CHIT1Q13231 466 aa5.4□□□□□ -1.54
NEDD8-203ENST00000524927 SLC17A1Q14916 467 aa5.4□□□□□ -1.54
NEDD8-203ENST00000524927 NPTX1Q15818 432 aa5.4□□□□□ -1.54
NEDD8-203ENST00000524927 LY6EQ16553 131 aa5.4□□□□□ -1.54
NEDD8-203ENST00000524927 PDK4Q16654 411 aa5.4□□□□□ -1.54
NEDD8-203ENST00000524927 C18orf21Q32NC0 220 aaPredicted RBP5.4□□□□□ -1.54
NEDD8-203ENST00000524927 ARHGAP11BQ3KRB8 267 aa5.4□□□□□ -1.54
NEDD8-203ENST00000524927 SLC24A4Q8NFF2 622 aa5.4□□□□□ -1.54
NEDD8-203ENST00000524927 C11orf40Q8WZ69 217 aa5.4□□□□□ -1.54
NEDD8-203ENST00000524927 CNRIP1Q96F85 164 aaPredicted RBP5.4□□□□□ -1.54
NEDD8-203ENST00000524927 URM1Q9BTM9 101 aaKnown RBP5.4□□□□□ -1.54
NEDD8-203ENST00000524927 FAM118AQ9NWS6 357 aa5.4□□□□□ -1.54
NEDD8-203ENST00000524927 B3GNT2Q9NY97 397 aa5.4□□□□□ -1.54
NEDD8-203ENST00000524927 DNAH17Q9UFH2 4485 aa5.4□□□□□ -1.55
NEDD8-203ENST00000524927 NUPR2A6NF83 97 aa5.39□□□□□ -1.55
NEDD8-203ENST00000524927 H0YAE9 185 aa5.39□□□□□ -1.55
NEDD8-203ENST00000524927 SPOPO43791 374 aa5.39□□□□□ -1.55
NEDD8-203ENST00000524927 IGKV1D-16P01601 117 aa5.39□□□□□ -1.55
NEDD8-203ENST00000524927 HCKP08631 526 aa5.39□□□□□ -1.55
NEDD8-203ENST00000524927 HPGDP15428 266 aa5.39□□□□□ -1.55
NEDD8-203ENST00000524927 LCN1P31025 176 aa5.39□□□□□ -1.55
NEDD8-203ENST00000524927 MYCNOSP40205 109 aa5.39□□□□□ -1.55
NEDD8-203ENST00000524927 P2RX1P51575 399 aa5.39□□□□□ -1.55
NEDD8-203ENST00000524927 IL5RAQ01344 420 aa5.39□□□□□ -1.55
NEDD8-203ENST00000524927 ZNF117Q03924 483 aa5.39□□□□□ -1.55
NEDD8-203ENST00000524927 DDX39BQ13838 428 aaKnown RBP5.39□□□□□ -1.55
NEDD8-203ENST00000524927 TOMM34Q15785 309 aaPredicted RBP5.39□□□□□ -1.55
NEDD8-203ENST00000524927 AANATQ16613 207 aa5.39□□□□□ -1.55
NEDD8-203ENST00000524927 GSG1Q2KHT4 349 aa5.39□□□□□ -1.55
NEDD8-203ENST00000524927 ODF4Q2M2E3 257 aa5.39□□□□□ -1.55
NEDD8-203ENST00000524927 TEX35Q5T0J7 233 aa5.39□□□□□ -1.55
NEDD8-203ENST00000524927 WDR25Q64LD2 544 aaPredicted RBP5.39□□□□□ -1.55
NEDD8-203ENST00000524927 METAP1DQ6UB28 335 aaPredicted RBP5.39□□□□□ -1.55
NEDD8-203ENST00000524927 MTERF4Q7Z6M4 381 aaKnown RBP5.39□□□□□ -1.55
NEDD8-203ENST00000524927 NFE4Q86UQ8 179 aa5.39□□□□□ -1.55
NEDD8-203ENST00000524927 PDZD9Q8IXQ8 264 aa5.39□□□□□ -1.55
NEDD8-203ENST00000524927 ZIC4Q8N9L1 334 aa5.39□□□□□ -1.55
NEDD8-203ENST00000524927 OR11H4Q8NGC9 324 aa5.39□□□□□ -1.55
NEDD8-203ENST00000524927 GPR119Q8TDV5 335 aa5.39□□□□□ -1.55
NEDD8-203ENST00000524927 CORO2AQ92828 525 aa5.39□□□□□ -1.55
NEDD8-203ENST00000524927 ZNF75AQ96N20 296 aa5.39□□□□□ -1.55
NEDD8-203ENST00000524927 ALKBH3Q96Q83 286 aaPredicted RBP5.39□□□□□ -1.55
NEDD8-203ENST00000524927 OR5M11Q96RB7 305 aa5.39□□□□□ -1.55
NEDD8-203ENST00000524927 NKX3-1Q99801 234 aaPredicted RBP5.39□□□□□ -1.55
NEDD8-203ENST00000524927 SSX3Q99909 188 aa5.39□□□□□ -1.55
NEDD8-203ENST00000524927 DNAJC4Q9NNZ3 241 aa5.39□□□□□ -1.55
NEDD8-203ENST00000524927 UBQLN4Q9NRR5 601 aa5.39□□□□□ -1.55
NEDD8-203ENST00000524927 TBK1Q9UHD2 729 aa5.39□□□□□ -1.55
NEDD8-203ENST00000524927 FBXL3Q9UKT7 428 aa5.39□□□□□ -1.55
NEDD8-203ENST00000524927 HDGFL3Q9Y3E1 203 aa5.39□□□□□ -1.55
NEDD8-203ENST00000524927 OARD1Q9Y530 152 aa5.39□□□□□ -1.55
NEDD8-203ENST00000524927 FLG2Q5D862 2391 aaPredicted RBP5.39□□□□□ -1.55
NEDD8-203ENST00000524927 DNAH6Q9C0G6 4158 aa5.38□□□□□ -1.55
NEDD8-203ENST00000524927 RPL36A-HNRNPH2H7BZ11 118 aa5.38□□□□□ -1.55
NEDD8-203ENST00000524927 CHST1O43916 411 aa5.38□□□□□ -1.55
NEDD8-203ENST00000524927 EIF1BO60739 113 aaKnown RBP5.38□□□□□ -1.55
NEDD8-203ENST00000524927 FSTL3O95633 263 aa5.38□□□□□ -1.55
NEDD8-203ENST00000524927 APRTP07741 180 aa5.38□□□□□ -1.55
NEDD8-203ENST00000524927 SLC6A1P30531 599 aa5.38□□□□□ -1.55
NEDD8-203ENST00000524927 WNT5AP41221 380 aa5.38□□□□□ -1.55
NEDD8-203ENST00000524927 SLC1A2P43004 574 aa5.38□□□□□ -1.55
NEDD8-203ENST00000524927 CRATP43155 626 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms