RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 PGA3P0DJD8 388 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 MSX1P28360 303 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 CASRP41180 1078 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 PTGDSP41222 190 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 P2RY4P51582 365 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 ATP1B3P54709 279 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 CLRN1P58418 232 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 FOXK1P85037 733 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 NKAIN1Q4KMZ8 207 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 FAHD2BQ6P2I3 314 aaPredicted RBP9.82□□□□□ -0.84
HDAC9-228ENST00000524023 RNF144BQ7Z419 303 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 RTN4RL2Q86UN3 420 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 MRPS24Q96EL2 167 aaKnown RBP9.82□□□□□ -0.84
HDAC9-228ENST00000524023 FAHD2AQ96GK7 314 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 PHB2Q99623 299 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 WDR77Q9BQA1 342 aaPredicted RBP9.82□□□□□ -0.84
HDAC9-228ENST00000524023 SEC61A2Q9H9S3 476 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 SDHAF3Q9NRP4 125 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 GLS2Q9UI32 602 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 A0A1B0GW55 424 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 ZNF878C9JN71 531 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 EFSO43281 561 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 TPD52L2O43399 206 aaKnown RBP9.82□□□□□ -0.84
HDAC9-228ENST00000524023 TIAF1O95411 115 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 OPN1LWP04000 364 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 DUX4L2P0CJ85 424 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 DUX4L3P0CJ86 424 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 DUX4L4P0CJ87 422 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 DUX4L5P0CJ88 424 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 DUX4L6P0CJ89 424 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 DUX4L7P0CJ90 424 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 ZNF20P17024 532 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 BCKDHBP21953 392 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 AVPR2P30518 371 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 DLSTP36957 453 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 LUMP51884 338 aaPredicted RBP9.82□□□□□ -0.84
HDAC9-228ENST00000524023 FAM74A1Q5RGS3 127 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 PTCRAQ6ISU1 281 aaPredicted RBP9.82□□□□□ -0.84
HDAC9-228ENST00000524023 TFAP2EQ6VUC0 442 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 ZNF574Q6ZN55 896 aaPredicted RBP9.82□□□□□ -0.84
HDAC9-228ENST00000524023 ACOT7LQ6ZUV0 252 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 MOB3CQ70IA8 216 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 RHOUQ7L0Q8 258 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 ADAD2Q8NCV1 583 aaKnown RBP9.82□□□□□ -0.84
HDAC9-228ENST00000524023 NOXO1Q8NFA2 376 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 OR10K1Q8NGX5 313 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 SPACA5Q96QH8 159 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 NICN1Q9BSH3 213 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 SOX7Q9BT81 388 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 PHF7Q9BWX1 381 aaPredicted RBP9.82□□□□□ -0.84
HDAC9-228ENST00000524023 LPAR5Q9H1C0 372 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 MOB1AQ9H8S9 216 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 FN3KRPQ9HA64 309 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 DUX4Q9UBX2 424 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 POLR1DQ9Y2S0 133 aa9.82□□□□□ -0.84
HDAC9-228ENST00000524023 IGLV3-32A0A0A0MS00 114 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 A0A0A6YYD4 124 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 FAM25EA8MYX2 175 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 TRIM77I1YAP6 450 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 BCAT2O15382 392 aaPredicted RBP9.81□□□□□ -0.84
HDAC9-228ENST00000524023 TRAF3IP2O43734 574 aaPredicted RBP9.81□□□□□ -0.84
HDAC9-228ENST00000524023 IGHG1P01857 330 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 PMP2P02689 132 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 IFNA6P05013 189 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 CHRM2P08172 466 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 ABOP16442 354 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 ATF4P18848 351 aaPredicted RBP9.81□□□□□ -0.84
HDAC9-228ENST00000524023 TBPP20226 339 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 CDAP32320 146 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 PRKXP51817 358 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 AFF3P51826 1226 aaKnown RBP9.81□□□□□ -0.84
HDAC9-228ENST00000524023 EMP2P54851 167 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 MFAP5Q13361 173 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 ATXN7L3Q14CW9 347 aaPredicted RBP9.81□□□□□ -0.84
HDAC9-228ENST00000524023 BEX5Q5H9J7 111 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 FAM69BQ5VUD6 431 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 TMEM71Q6P5X7 295 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 GLIPR1L1Q6UWM5 242 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 ZNF101Q8IZC7 436 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 OR5AS1Q8N127 324 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 ADPRHL1Q8NDY3 354 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 OR5L2Q8NGL0 311 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 OR2AJ1Q8NGZ0 328 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 ZNF75AQ96N20 296 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 DNTTIP1Q9H147 329 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 LDAHQ9H6V9 325 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 BARX1Q9HBU1 254 aaPredicted RBP9.81□□□□□ -0.84
HDAC9-228ENST00000524023 WIF1Q9Y5W5 379 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 CFAP54Q96N23 3096 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 A0A1W2PNR3 127 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 CDK2AP1O14519 115 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 TOX3O15405 576 aaPredicted RBP9.81□□□□□ -0.84
HDAC9-228ENST00000524023 SLC2A1P11166 492 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 AKR1C4P17516 323 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 VAMP1P23763 118 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 STARP49675 285 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 ACY1Q03154 408 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 SMAD4Q13485 552 aaKnown RBP9.81□□□□□ -0.84
HDAC9-228ENST00000524023 INPP5JQ15735 1006 aaPredicted RBP9.81□□□□□ -0.84
HDAC9-228ENST00000524023 SMAD2Q15796 467 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms