RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 TNFRSF19Q9NS68 423 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 DCAF16Q9NXF7 216 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 PEMTQ9UBM1 199 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 EIF3KQ9UBQ5 218 aaKnown RBP4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 HAO1Q9UJM8 370 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 NUP50Q9UKX7 468 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 SOX21Q9Y651 276 aaPredicted RBP4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 AUP1Q9Y679 476 aa4.41□□□□□ -1.7
CTNNA1-239ENST00000523685 A0A0G2JK05 382 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 C5orf49A4QMS7 147 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 PRORSD1PA6NEY8 169 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 ZSCAN5BA6NJL1 495 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 BLOC1S5-TXNDC5H3BN57 136 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 TPST2O60704 377 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 FOXH1O75593 365 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 SERPINB7O75635 380 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 SLC2A10O95528 541 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 SNAP29O95721 258 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 MT-ATP6P00846 226 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 IGHV3-13P01766 116 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 IGHG1P01857 330 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 OPN1SWP03999 348 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 MDKP21741 143 aaPredicted RBP4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 STOMP27105 288 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 CDAP32320 146 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 WNT5AP41221 380 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 GDI2P50395 445 aaKnown RBP4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 STX1BP61266 288 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 SEC61A1P61619 476 aaKnown RBP4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 SLC3A1Q07837 685 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 ZNF154Q13106 437 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 FADDQ13158 208 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 RBMS2Q15434 407 aaKnown RBP4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 SGCAQ16586 387 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 ZNF74Q16587 644 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 ZNF718Q3SXZ3 478 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 PABPC1L2AQ5JQF8 200 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 PXDC1Q5TGL8 231 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 TTC33Q6PID6 262 aaPredicted RBP4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 NHLRC1Q6VVB1 395 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 MSANTD1Q6ZTZ1 278 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 NANOGNBQ7Z5D8 188 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 ZDHHC23Q8IYP9 409 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 ZNF101Q8IZC7 436 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 C10orf111Q8N326 155 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 NANOGP1Q8N7R0 232 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 DEFB108BQ8NET1 73 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 OR6S1Q8NH40 331 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 AKR7LQ8NHP1 331 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 VANGL1Q8TAA9 524 aaPredicted RBP4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 MPLKIPQ8TAP9 179 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 SLC25A40Q8TBP6 338 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 AENQ8WTP8 325 aaKnown RBP4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 NSMAFQ92636 917 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 POP5Q969H6 163 aaKnown RBP4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 RPL36ALQ969Q0 106 aaKnown RBP4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 MCHR2Q969V1 340 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 SLC25A28Q96A46 364 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 LRRC58Q96CX6 371 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 SLC25A44Q96H78 314 aaPredicted RBP4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 ZNF48Q96MX3 618 aaPredicted RBP4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 ZNF607Q96SK3 696 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 GPA33Q99795 319 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 TMEM43Q9BTV4 400 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 OR2J1Q9GZK6 312 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 EGLN1Q9GZT9 426 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 TCF7L2Q9NQB0 619 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 NANSQ9NR45 359 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 SDR39U1Q9NRG7 319 aaPredicted RBP4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 NKIRAS2Q9NYR9 191 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 PLEK2Q9NYT0 353 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 TAS2R5Q9NYW4 299 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 SLC25A37Q9NYZ2 338 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 LEF1Q9UJU2 399 aaPredicted RBP4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 PURGQ9UJV8 347 aaKnown RBP4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 ANGPT4Q9Y264 503 aa4.4□□□□□ -1.71
CTNNA1-239ENST00000523685 WNK2Q9Y3S1 2297 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 MDFIC2A0A1B0GVS7 189 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 A0A1W2PRG6 482 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 TMEM120BA0PK00 339 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 EVPLLA8MZ36 301 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 TRAPPC2LH3BP13 241 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 POLR3GO15318 223 aaPredicted RBP4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 CHP2O43745 196 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 TIMM8AO60220 97 aaPredicted RBP4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 TRMUO75648 421 aaKnown RBP4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 MFN2O95140 757 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 IGHMP01871 453 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 PGA4P0DJD7 388 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 PGA3P0DJD8 388 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 IGHV4-38-2P0DP08 117 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 ZNF32P17041 273 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 CALRP27797 417 aaKnown RBP4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 TNFSF8P32971 234 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 MMP15P51511 669 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 PPP1CBP62140 327 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 ERVK-25P63136 954 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 TNFAIP6P98066 277 aaPredicted RBP4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 EFNB1P98172 346 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 FMODQ06828 376 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms