RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 LINC00346Q8IVM7 164 aa9.51□□□□□ -0.89
SDCBP-211ENST00000523441 NRMQ8IXM6 262 aa9.51□□□□□ -0.89
SDCBP-211ENST00000523441 LRRC75AQ8NAA5 344 aa9.51□□□□□ -0.89
SDCBP-211ENST00000523441 OR51G2Q8NGK0 314 aa9.51□□□□□ -0.89
SDCBP-211ENST00000523441 SEH1LQ96EE3 360 aa9.51□□□□□ -0.89
SDCBP-211ENST00000523441 EBF4Q9BQW3 602 aa9.51□□□□□ -0.89
SDCBP-211ENST00000523441 SYT4Q9H2B2 425 aa9.51□□□□□ -0.89
SDCBP-211ENST00000523441 ADA2Q9NZK5 511 aa9.51□□□□□ -0.89
SDCBP-211ENST00000523441 KPTNQ9Y664 436 aa9.51□□□□□ -0.89
SDCBP-211ENST00000523441 CAPN7Q9Y6W3 813 aa9.51□□□□□ -0.89
SDCBP-211ENST00000523441 TEX13CA0A0J9YWL9 993 aa9.5□□□□□ -0.89
SDCBP-211ENST00000523441 TMEM120BA0PK00 339 aa9.5□□□□□ -0.89
SDCBP-211ENST00000523441 SOCS2O14508 198 aa9.5□□□□□ -0.89
SDCBP-211ENST00000523441 KHDRBS3O75525 346 aaKnown RBP9.5□□□□□ -0.89
SDCBP-211ENST00000523441 FSTL3O95633 263 aa9.5□□□□□ -0.89
SDCBP-211ENST00000523441 ECDO95905 644 aaPredicted RBP9.5□□□□□ -0.89
SDCBP-211ENST00000523441 SELLP14151 372 aa9.5□□□□□ -0.89
SDCBP-211ENST00000523441 KIR2DS4P43632 304 aa9.5□□□□□ -0.89
SDCBP-211ENST00000523441 BMXP51813 675 aa9.5□□□□□ -0.89
SDCBP-211ENST00000523441 GUCA2AQ02747 115 aa9.5□□□□□ -0.89
SDCBP-211ENST00000523441 EMX1Q04741 257 aaPredicted RBP9.5□□□□□ -0.89
SDCBP-211ENST00000523441 MALLQ13021 153 aa9.5□□□□□ -0.89
SDCBP-211ENST00000523441 EPGNQ6UW88 154 aa9.5□□□□□ -0.89
SDCBP-211ENST00000523441 GLB1L2Q8IW92 636 aa9.5□□□□□ -0.89
SDCBP-211ENST00000523441 OR4F17Q8NGA8 305 aa9.5□□□□□ -0.89
SDCBP-211ENST00000523441 OR5T2Q8NGG2 359 aa9.5□□□□□ -0.89
SDCBP-211ENST00000523441 OR2AE1Q8NHA4 323 aa9.5□□□□□ -0.89
SDCBP-211ENST00000523441 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.5□□□□□ -0.89
SDCBP-211ENST00000523441 ERGIC1Q969X5 290 aa9.5□□□□□ -0.89
SDCBP-211ENST00000523441 TPD52L3Q96J77 140 aa9.5□□□□□ -0.89
SDCBP-211ENST00000523441 OR4F4Q96R69 305 aa9.5□□□□□ -0.89
SDCBP-211ENST00000523441 PITX2Q99697 317 aa9.5□□□□□ -0.89
SDCBP-211ENST00000523441 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.5□□□□□ -0.89
SDCBP-211ENST00000523441 AURKCQ9UQB9 309 aa9.5□□□□□ -0.89
SDCBP-211ENST00000523441 V9GYY5 206 aaPredicted RBP9.5□□□□□ -0.89
SDCBP-211ENST00000523441 A0A1W2PQ09 198 aa9.49□□□□□ -0.89
SDCBP-211ENST00000523441 PRSS37A4D1T9 235 aa9.49□□□□□ -0.89
SDCBP-211ENST00000523441 GGT3PA6NGU5 568 aa9.49□□□□□ -0.89
SDCBP-211ENST00000523441 NDUFA2O43678 99 aa9.49□□□□□ -0.89
SDCBP-211ENST00000523441 CHST1O43916 411 aa9.49□□□□□ -0.89
SDCBP-211ENST00000523441 POU1F1P28069 291 aa9.49□□□□□ -0.89
SDCBP-211ENST00000523441 HOXD3P31249 432 aaPredicted RBP9.49□□□□□ -0.89
SDCBP-211ENST00000523441 GGT2P36268 569 aa9.49□□□□□ -0.89
SDCBP-211ENST00000523441 CRYBA2P53672 197 aa9.49□□□□□ -0.89
SDCBP-211ENST00000523441 KRR1Q13601 381 aaKnown RBP9.49□□□□□ -0.89
SDCBP-211ENST00000523441 NFYCQ13952 458 aa9.49□□□□□ -0.89
SDCBP-211ENST00000523441 LRRC23Q53EV4 343 aaPredicted RBP9.49□□□□□ -0.89
SDCBP-211ENST00000523441 WDR38Q5JTN6 314 aa9.49□□□□□ -0.89
SDCBP-211ENST00000523441 GCSAMQ8N6F7 178 aa9.49□□□□□ -0.89
SDCBP-211ENST00000523441 Q8N7P7 452 aa9.49□□□□□ -0.89
SDCBP-211ENST00000523441 CELF2-AS1Q8N7Q2 184 aa9.49□□□□□ -0.89
SDCBP-211ENST00000523441 NPRL2Q8WTW4 380 aa9.49□□□□□ -0.89
SDCBP-211ENST00000523441 LRRC29Q8WV35 223 aa9.49□□□□□ -0.89
SDCBP-211ENST00000523441 RASSF5Q8WWW0 418 aa9.49□□□□□ -0.89
SDCBP-211ENST00000523441 LIPHQ8WWY8 451 aa9.49□□□□□ -0.89
SDCBP-211ENST00000523441 TSSK2Q96PF2 358 aa9.49□□□□□ -0.89
SDCBP-211ENST00000523441 CGREF1Q99674 301 aa9.49□□□□□ -0.89
SDCBP-211ENST00000523441 WACQ9BTA9 647 aa9.49□□□□□ -0.89
SDCBP-211ENST00000523441 DCTN5Q9BTE1 182 aa9.49□□□□□ -0.89
SDCBP-211ENST00000523441 TMEM109Q9BVC6 243 aa9.49□□□□□ -0.89
SDCBP-211ENST00000523441 NSRP1Q9H0G5 558 aaKnown RBP9.49□□□□□ -0.89
SDCBP-211ENST00000523441 TRIM36Q9NQ86 728 aa9.49□□□□□ -0.89
SDCBP-211ENST00000523441 SNTG1Q9NSN8 517 aa9.49□□□□□ -0.89
SDCBP-211ENST00000523441 PCDHGB5Q9Y5G0 923 aa9.49□□□□□ -0.89
SDCBP-211ENST00000523441 ACOT8O14734 319 aa9.48□□□□□ -0.89
SDCBP-211ENST00000523441 ANGPT2O15123 496 aa9.48□□□□□ -0.89
SDCBP-211ENST00000523441 NDUFB3O43676 98 aa9.48□□□□□ -0.89
SDCBP-211ENST00000523441 ANGPTL7O43827 346 aa9.48□□□□□ -0.89
SDCBP-211ENST00000523441 ACSM4P0C7M7 580 aa9.48□□□□□ -0.89
SDCBP-211ENST00000523441 PF4V1P10720 104 aa9.48□□□□□ -0.89
SDCBP-211ENST00000523441 ZNF26P17031 533 aaPredicted RBP9.48□□□□□ -0.89
SDCBP-211ENST00000523441 IDH3AP50213 366 aa9.48□□□□□ -0.89
SDCBP-211ENST00000523441 KRTAP10-11P60412 298 aa9.48□□□□□ -0.89
SDCBP-211ENST00000523441 LSM6P62312 80 aaKnown RBP9.48□□□□□ -0.89
SDCBP-211ENST00000523441 PCK2Q16822 640 aa9.48□□□□□ -0.89
SDCBP-211ENST00000523441 VMACQ2NL98 169 aa9.48□□□□□ -0.89
SDCBP-211ENST00000523441 TBPL2Q6SJ96 375 aa9.48□□□□□ -0.89
SDCBP-211ENST00000523441 CFAP77Q6ZQR2 320 aa9.48□□□□□ -0.89
SDCBP-211ENST00000523441 GJC3Q8NFK1 279 aa9.48□□□□□ -0.89
SDCBP-211ENST00000523441 LRRC8CQ8TDW0 803 aa9.48□□□□□ -0.89
SDCBP-211ENST00000523441 LZICQ8WZA0 190 aa9.48□□□□□ -0.89
SDCBP-211ENST00000523441 COQ7Q99807 217 aa9.48□□□□□ -0.89
SDCBP-211ENST00000523441 NPFFR1Q9GZQ6 430 aa9.48□□□□□ -0.89
SDCBP-211ENST00000523441 NUAK2Q9H093 628 aa9.48□□□□□ -0.89
SDCBP-211ENST00000523441 HDHD2Q9H0R4 259 aa9.48□□□□□ -0.89
SDCBP-211ENST00000523441 GAR1Q9NY12 217 aaKnown RBP9.48□□□□□ -0.89
SDCBP-211ENST00000523441 BAG5Q9UL15 447 aa9.48□□□□□ -0.89
SDCBP-211ENST00000523441 NDUFAF1Q9Y375 327 aa9.48□□□□□ -0.89
SDCBP-211ENST00000523441 MAB21L2Q9Y586 359 aa9.48□□□□□ -0.89
SDCBP-211ENST00000523441 LHFPL6Q9Y693 200 aa9.48□□□□□ -0.89
SDCBP-211ENST00000523441 CD300LBA8K4G0 201 aa9.47□□□□□ -0.89
SDCBP-211ENST00000523441 J3KTA2 159 aa9.47□□□□□ -0.89
SDCBP-211ENST00000523441 J3QW42 95 aa9.47□□□□□ -0.89
SDCBP-211ENST00000523441 PF4P02776 101 aa9.47□□□□□ -0.89
SDCBP-211ENST00000523441 CD14P08571 375 aa9.47□□□□□ -0.89
SDCBP-211ENST00000523441 ST3GAL3Q11203 375 aa9.47□□□□□ -0.89
SDCBP-211ENST00000523441 FHL1Q13642 323 aa9.47□□□□□ -0.89
SDCBP-211ENST00000523441 MICBQ29980 383 aa9.47□□□□□ -0.89
SDCBP-211ENST00000523441 RSPO1Q2MKA7 263 aaPredicted RBP9.47□□□□□ -0.89
SDCBP-211ENST00000523441 LRRC75BQ2VPJ9 315 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms