RNA–Protein interactions for RNA: ENST00000523262.5

CSGALNACT1-213, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-213ENST00000523262 PRSS12P56730 875 aa13.18□□□□□ -0.3
CSGALNACT1-213ENST00000523262 LIPEQ05469 1076 aa13.18□□□□□ -0.3
CSGALNACT1-213ENST00000523262 SF3A3Q12874 501 aaKnown RBP eCLIP13.18□□□□□ -0.3
CSGALNACT1-213ENST00000523262 COX10Q12887 443 aa13.18□□□□□ -0.3
CSGALNACT1-213ENST00000523262 CLEC12AQ5QGZ9 265 aa13.18□□□□□ -0.3
CSGALNACT1-213ENST00000523262 SFRP4Q6FHJ7 346 aaPredicted RBP13.18□□□□□ -0.3
CSGALNACT1-213ENST00000523262 SCCPDHQ8NBX0 429 aa13.18□□□□□ -0.3
CSGALNACT1-213ENST00000523262 RCN3Q96D15 328 aa13.18□□□□□ -0.3
CSGALNACT1-213ENST00000523262 WDFY2Q96P53 400 aa13.18□□□□□ -0.3
CSGALNACT1-213ENST00000523262 ATF6BQ99941 703 aa13.18□□□□□ -0.3
CSGALNACT1-213ENST00000523262 PKP2Q99959 881 aa13.18□□□□□ -0.3
CSGALNACT1-213ENST00000523262 RBM4BQ9BQ04 359 aaKnown RBP13.18□□□□□ -0.3
CSGALNACT1-213ENST00000523262 SRA1Q9HD15 236 aaKnown RBP13.18□□□□□ -0.3
CSGALNACT1-213ENST00000523262 CMTM6Q9NX76 183 aa13.18□□□□□ -0.3
CSGALNACT1-213ENST00000523262 TRAV38-1A0A0B4J264 116 aa13.17□□□□□ -0.3
CSGALNACT1-213ENST00000523262 IGHV1-69DA0A0B4J2H0 117 aa13.17□□□□□ -0.3
CSGALNACT1-213ENST00000523262 A0A1W2PRQ8 180 aa13.17□□□□□ -0.3
CSGALNACT1-213ENST00000523262 C3orf80F5H4A9 247 aa13.17□□□□□ -0.3
CSGALNACT1-213ENST00000523262 EBAG9O00559 213 aa13.17□□□□□ -0.3
CSGALNACT1-213ENST00000523262 IGHV1-69P01742 117 aa13.17□□□□□ -0.3
CSGALNACT1-213ENST00000523262 HLA-DQA2P01906 255 aa13.17□□□□□ -0.3
CSGALNACT1-213ENST00000523262 CA6P23280 308 aa13.17□□□□□ -0.3
CSGALNACT1-213ENST00000523262 TPTEP56180 551 aa13.17□□□□□ -0.3
CSGALNACT1-213ENST00000523262 TRAP1Q12931 704 aaKnown RBP13.17□□□□□ -0.3
CSGALNACT1-213ENST00000523262 DGCR6Q14129 220 aa13.17□□□□□ -0.3
CSGALNACT1-213ENST00000523262 MPPED2Q15777 294 aa13.17□□□□□ -0.3
CSGALNACT1-213ENST00000523262 TAF9Q16594 264 aa13.17□□□□□ -0.3
CSGALNACT1-213ENST00000523262 RSPO1Q2MKA7 263 aaPredicted RBP13.17□□□□□ -0.3
CSGALNACT1-213ENST00000523262 SMARCD3Q6STE5 483 aa13.17□□□□□ -0.3
CSGALNACT1-213ENST00000523262 RHOUQ7L0Q8 258 aa13.17□□□□□ -0.3
CSGALNACT1-213ENST00000523262 LINC00346Q8IVM7 164 aa13.17□□□□□ -0.3
CSGALNACT1-213ENST00000523262 LHX4Q969G2 390 aa13.17□□□□□ -0.3
CSGALNACT1-213ENST00000523262 FAM162AQ96A26 154 aa13.17□□□□□ -0.3
CSGALNACT1-213ENST00000523262 ERMAPQ96PL5 475 aaPredicted RBP13.17□□□□□ -0.3
CSGALNACT1-213ENST00000523262 TBX15Q96SF7 602 aa13.17□□□□□ -0.3
CSGALNACT1-213ENST00000523262 TCF7L1Q9HCS4 588 aa13.17□□□□□ -0.3
CSGALNACT1-213ENST00000523262 B9D1Q9UPM9 204 aa13.17□□□□□ -0.3
CSGALNACT1-213ENST00000523262 IGLV1-36A0A0B4J1U3 117 aa13.16□□□□□ -0.3
CSGALNACT1-213ENST00000523262 DCTN6O00399 190 aa13.16□□□□□ -0.3
CSGALNACT1-213ENST00000523262 GPR137BO60478 399 aa13.16□□□□□ -0.3
CSGALNACT1-213ENST00000523262 GMDSO60547 372 aa13.16□□□□□ -0.3
CSGALNACT1-213ENST00000523262 PPP1R3DO95685 299 aa13.16□□□□□ -0.3
CSGALNACT1-213ENST00000523262 MMP9P14780 707 aa13.16□□□□□ -0.3
CSGALNACT1-213ENST00000523262 GGT2P36268 569 aa13.16□□□□□ -0.3
CSGALNACT1-213ENST00000523262 OMPP47874 163 aa13.16□□□□□ -0.3
CSGALNACT1-213ENST00000523262 ASPHD2Q6ICH7 369 aa13.16□□□□□ -0.3
CSGALNACT1-213ENST00000523262 SLC18B1Q6NT16 456 aa13.16□□□□□ -0.3
CSGALNACT1-213ENST00000523262 CFAP77Q6ZQR2 320 aa13.16□□□□□ -0.3
CSGALNACT1-213ENST00000523262 SLC15A3Q8IY34 581 aa13.16□□□□□ -0.3
CSGALNACT1-213ENST00000523262 PLPP7Q8NBV4 271 aa13.16□□□□□ -0.3
CSGALNACT1-213ENST00000523262 SLC26A10Q8NG04 563 aa13.16□□□□□ -0.3
CSGALNACT1-213ENST00000523262 LINC01006Q8NI28 216 aa13.16□□□□□ -0.3
CSGALNACT1-213ENST00000523262 ADAT1Q9BUB4 502 aaKnown RBP13.16□□□□□ -0.3
CSGALNACT1-213ENST00000523262 DPAGT1Q9H3H5 408 aa13.16□□□□□ -0.3
CSGALNACT1-213ENST00000523262 GMPR2Q9P2T1 348 aaKnown RBP13.16□□□□□ -0.3
CSGALNACT1-213ENST00000523262 CTSZQ9UBR2 303 aa13.16□□□□□ -0.3
CSGALNACT1-213ENST00000523262 FAM96BQ9Y3D0 163 aa13.16□□□□□ -0.3
CSGALNACT1-213ENST00000523262 GGT3PA6NGU5 568 aa13.15□□□□□ -0.3
CSGALNACT1-213ENST00000523262 CD300LBA8K4G0 201 aa13.15□□□□□ -0.3
CSGALNACT1-213ENST00000523262 IGHV4-59P01825 116 aa13.15□□□□□ -0.3
CSGALNACT1-213ENST00000523262 RHCEP18577 417 aa13.15□□□□□ -0.3
CSGALNACT1-213ENST00000523262 NOS3P29474 1203 aa13.15□□□□□ -0.3
CSGALNACT1-213ENST00000523262 SLC7A2P52569 658 aa13.15□□□□□ -0.3
CSGALNACT1-213ENST00000523262 ARF6P62330 175 aa13.15□□□□□ -0.3
CSGALNACT1-213ENST00000523262 MZT1Q08AG7 82 aa13.15□□□□□ -0.3
CSGALNACT1-213ENST00000523262 KRT72Q14CN4 511 aa13.15□□□□□ -0.3
CSGALNACT1-213ENST00000523262 KRTAP27-1Q3LI81 207 aa13.15□□□□□ -0.3
CSGALNACT1-213ENST00000523262 GDPGP1Q6ZNW5 385 aa13.15□□□□□ -0.3
CSGALNACT1-213ENST00000523262 NAA40Q86UY6 237 aa13.15□□□□□ -0.3
CSGALNACT1-213ENST00000523262 OR6V1Q8N148 313 aa13.15□□□□□ -0.3
CSGALNACT1-213ENST00000523262 SPERTQ8NA61 448 aa13.15□□□□□ -0.3
CSGALNACT1-213ENST00000523262 FANK1Q8TC84 345 aa13.15□□□□□ -0.3
CSGALNACT1-213ENST00000523262 LRTOMTQ8WZ04 291 aa13.15□□□□□ -0.3
CSGALNACT1-213ENST00000523262 SPTSSAQ969W0 71 aa13.15□□□□□ -0.3
CSGALNACT1-213ENST00000523262 NMNAT3Q96T66 252 aa13.15□□□□□ -0.3
CSGALNACT1-213ENST00000523262 HOPXQ9BPY8 73 aaPredicted RBP13.15□□□□□ -0.3
CSGALNACT1-213ENST00000523262 RPRD1BQ9NQG5 326 aaKnown RBP13.15□□□□□ -0.3
CSGALNACT1-213ENST00000523262 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.14□□□□□ -0.31
CSGALNACT1-213ENST00000523262 hCG_1807616A0A1W2PRN6 198 aa13.14□□□□□ -0.31
CSGALNACT1-213ENST00000523262 BTBD17A6NE02 478 aa13.14□□□□□ -0.31
CSGALNACT1-213ENST00000523262 OOEPA6NGQ2 149 aa13.14□□□□□ -0.31
CSGALNACT1-213ENST00000523262 SLC22A31A6NKX4 558 aa13.14□□□□□ -0.31
CSGALNACT1-213ENST00000523262 A6NLC8 198 aa13.14□□□□□ -0.31
CSGALNACT1-213ENST00000523262 M0R135 149 aa13.14□□□□□ -0.31
CSGALNACT1-213ENST00000523262 SLC22A2O15244 555 aa13.14□□□□□ -0.31
CSGALNACT1-213ENST00000523262 CLPXO76031 633 aa13.14□□□□□ -0.31
CSGALNACT1-213ENST00000523262 ECDO95905 644 aaPredicted RBP13.14□□□□□ -0.31
CSGALNACT1-213ENST00000523262 GYPAP02724 150 aa13.14□□□□□ -0.31
CSGALNACT1-213ENST00000523262 SLC6A6P31641 620 aa13.14□□□□□ -0.31
CSGALNACT1-213ENST00000523262 IER3P46695 156 aa13.14□□□□□ -0.31
CSGALNACT1-213ENST00000523262 FXYD6P3P58550 94 aa13.14□□□□□ -0.31
CSGALNACT1-213ENST00000523262 KRTAP10-3P60369 221 aa13.14□□□□□ -0.31
CSGALNACT1-213ENST00000523262 HOXA4Q00056 320 aaPredicted RBP13.14□□□□□ -0.31
CSGALNACT1-213ENST00000523262 C11orf91Q3C1V1 193 aa13.14□□□□□ -0.31
CSGALNACT1-213ENST00000523262 BTN2A1Q7KYR7 527 aa13.14□□□□□ -0.31
CSGALNACT1-213ENST00000523262 TRPM8Q7Z2W7 1104 aa13.14□□□□□ -0.31
CSGALNACT1-213ENST00000523262 TSEN54Q7Z6J9 526 aaKnown RBP13.14□□□□□ -0.31
CSGALNACT1-213ENST00000523262 OR4K13Q8NH42 304 aa13.14□□□□□ -0.31
CSGALNACT1-213ENST00000523262 OR52J3Q8NH60 311 aa13.14□□□□□ -0.31
CSGALNACT1-213ENST00000523262 RP9Q8TA86 221 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms