RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 CLEC12AQ5QGZ9 265 aa9.5□□□□□ -0.89
MRPS28-206ENST00000520946 TBPL2Q6SJ96 375 aa9.5□□□□□ -0.89
MRPS28-206ENST00000520946 LNX2Q8N448 690 aa9.5□□□□□ -0.89
MRPS28-206ENST00000520946 OR2T12Q8NG77 320 aa9.5□□□□□ -0.89
MRPS28-206ENST00000520946 OR5R1Q8NH85 324 aa9.5□□□□□ -0.89
MRPS28-206ENST00000520946 PPP1R14AQ96A00 147 aa9.5□□□□□ -0.89
MRPS28-206ENST00000520946 ATF6BQ99941 703 aa9.5□□□□□ -0.89
MRPS28-206ENST00000520946 SIRPDQ9H106 197 aa9.5□□□□□ -0.89
MRPS28-206ENST00000520946 SRA1Q9HD15 236 aaKnown RBP9.5□□□□□ -0.89
MRPS28-206ENST00000520946 C14orf119Q9NWQ9 140 aa9.5□□□□□ -0.89
MRPS28-206ENST00000520946 DNAJB11Q9UBS4 358 aa9.5□□□□□ -0.89
MRPS28-206ENST00000520946 FAM32AQ9Y421 112 aaKnown RBP9.5□□□□□ -0.89
MRPS28-206ENST00000520946 N6AMT1Q9Y5N5 214 aa9.5□□□□□ -0.89
MRPS28-206ENST00000520946 KPTNQ9Y664 436 aa9.5□□□□□ -0.89
MRPS28-206ENST00000520946 A0A087WUU8 490 aa9.49□□□□□ -0.89
MRPS28-206ENST00000520946 A0A1W2PRD5 423 aa9.49□□□□□ -0.89
MRPS28-206ENST00000520946 A0A1W2PRF3 423 aa9.49□□□□□ -0.89
MRPS28-206ENST00000520946 A0A1W2PRM7 423 aa9.49□□□□□ -0.89
MRPS28-206ENST00000520946 J3KTA2 159 aa9.49□□□□□ -0.89
MRPS28-206ENST00000520946 MRASO14807 208 aa9.49□□□□□ -0.89
MRPS28-206ENST00000520946 TSPAN9O75954 239 aa9.49□□□□□ -0.89
MRPS28-206ENST00000520946 NPPAP01160 153 aa9.49□□□□□ -0.89
MRPS28-206ENST00000520946 OPN1MWP04001 364 aa9.49□□□□□ -0.89
MRPS28-206ENST00000520946 ACSM4P0C7M7 580 aa9.49□□□□□ -0.89
MRPS28-206ENST00000520946 OPN1MW2P0DN77 364 aa9.49□□□□□ -0.89
MRPS28-206ENST00000520946 OPN1MW3P0DN78 364 aa9.49□□□□□ -0.89
MRPS28-206ENST00000520946 TROVE2P10155 538 aaKnown RBP eCLIP9.49□□□□□ -0.89
MRPS28-206ENST00000520946 FUT4P22083 530 aa9.49□□□□□ -0.89
MRPS28-206ENST00000520946 MDH1P40925 334 aaKnown RBP9.49□□□□□ -0.89
MRPS28-206ENST00000520946 POU4F2Q12837 409 aa9.49□□□□□ -0.89
MRPS28-206ENST00000520946 COX10Q12887 443 aa9.49□□□□□ -0.89
MRPS28-206ENST00000520946 MAPRE2Q15555 327 aa9.49□□□□□ -0.89
MRPS28-206ENST00000520946 KCNMB1Q16558 191 aa9.49□□□□□ -0.89
MRPS28-206ENST00000520946 MICBQ29980 383 aa9.49□□□□□ -0.89
MRPS28-206ENST00000520946 BEAN1Q3B7T3 259 aa9.49□□□□□ -0.89
MRPS28-206ENST00000520946 TMPRSS11FQ6ZWK6 438 aa9.49□□□□□ -0.89
MRPS28-206ENST00000520946 SLC36A1Q7Z2H8 476 aa9.49□□□□□ -0.89
MRPS28-206ENST00000520946 CALHM3Q86XJ0 350 aa9.49□□□□□ -0.89
MRPS28-206ENST00000520946 LINC00346Q8IVM7 164 aa9.49□□□□□ -0.89
MRPS28-206ENST00000520946 C11orf44Q8N8P7 122 aa9.49□□□□□ -0.89
MRPS28-206ENST00000520946 PLPP7Q8NBV4 271 aa9.49□□□□□ -0.89
MRPS28-206ENST00000520946 OR8S1Q8NH09 359 aa9.49□□□□□ -0.89
MRPS28-206ENST00000520946 SPTSSAQ969W0 71 aa9.49□□□□□ -0.89
MRPS28-206ENST00000520946 FAM46AQ96IP4 442 aaKnown RBP9.49□□□□□ -0.89
MRPS28-206ENST00000520946 FAM234AQ9H0X4 552 aa9.49□□□□□ -0.89
MRPS28-206ENST00000520946 SMURF1Q9HCE7 757 aa9.49□□□□□ -0.89
MRPS28-206ENST00000520946 SIRT7Q9NRC8 400 aa9.49□□□□□ -0.89
MRPS28-206ENST00000520946 MRGBPQ9NV56 204 aa9.49□□□□□ -0.89
MRPS28-206ENST00000520946 VSX1Q9NZR4 365 aaPredicted RBP9.49□□□□□ -0.89
MRPS28-206ENST00000520946 TET2Q6N021 2002 aaPredicted RBP9.49□□□□□ -0.89
MRPS28-206ENST00000520946 IGHV3OR15-7A0A075B7D8 119 aa9.48□□□□□ -0.89
MRPS28-206ENST00000520946 MEIOCA2RUB1 952 aa9.48□□□□□ -0.89
MRPS28-206ENST00000520946 CD300LBA8K4G0 201 aa9.48□□□□□ -0.89
MRPS28-206ENST00000520946 FAM220BPB1ANY3 271 aa9.48□□□□□ -0.89
MRPS28-206ENST00000520946 CDC42EP2O14613 210 aa9.48□□□□□ -0.89
MRPS28-206ENST00000520946 NDUFB3O43676 98 aa9.48□□□□□ -0.89
MRPS28-206ENST00000520946 ZNF823P16415 610 aa9.48□□□□□ -0.89
MRPS28-206ENST00000520946 POU1F1P28069 291 aa9.48□□□□□ -0.89
MRPS28-206ENST00000520946 NOS3P29474 1203 aa9.48□□□□□ -0.89
MRPS28-206ENST00000520946 LOXL3P58215 753 aa9.48□□□□□ -0.89
MRPS28-206ENST00000520946 TRAP1Q12931 704 aaKnown RBP9.48□□□□□ -0.89
MRPS28-206ENST00000520946 BLMHQ13867 455 aa9.48□□□□□ -0.89
MRPS28-206ENST00000520946 TAF13Q15543 124 aa9.48□□□□□ -0.89
MRPS28-206ENST00000520946 IFI44LQ53G44 452 aa9.48□□□□□ -0.89
MRPS28-206ENST00000520946 FGD3Q5JSP0 725 aa9.48□□□□□ -0.89
MRPS28-206ENST00000520946 AGBL2Q5U5Z8 902 aa9.48□□□□□ -0.89
MRPS28-206ENST00000520946 METTL21CQ5VZV1 264 aa9.48□□□□□ -0.89
MRPS28-206ENST00000520946 SLC35E4Q6ICL7 350 aa9.48□□□□□ -0.89
MRPS28-206ENST00000520946 C11orf88Q6PI97 169 aa9.48□□□□□ -0.89
MRPS28-206ENST00000520946 DPY19L2P2Q6ZN68 376 aa9.48□□□□□ -0.89
MRPS28-206ENST00000520946 FAM122BQ7Z309 247 aa9.48□□□□□ -0.89
MRPS28-206ENST00000520946 VTCN1Q7Z7D3 282 aa9.48□□□□□ -0.89
MRPS28-206ENST00000520946 PIP4P2Q8N4L2 257 aa9.48□□□□□ -0.89
MRPS28-206ENST00000520946 DTX3Q8N9I9 347 aa9.48□□□□□ -0.89
MRPS28-206ENST00000520946 FAM156AQ8NDB6 213 aa9.48□□□□□ -0.89
MRPS28-206ENST00000520946 OR4C13Q8NGP0 309 aa9.48□□□□□ -0.89
MRPS28-206ENST00000520946 OR2T6Q8NHC8 308 aa9.48□□□□□ -0.89
MRPS28-206ENST00000520946 H1FXQ92522 213 aaKnown RBP9.48□□□□□ -0.89
MRPS28-206ENST00000520946 CLPTM1LQ96KA5 538 aa9.48□□□□□ -0.89
MRPS28-206ENST00000520946 TSSK2Q96PF2 358 aa9.48□□□□□ -0.89
MRPS28-206ENST00000520946 ERMAPQ96PL5 475 aaPredicted RBP9.48□□□□□ -0.89
MRPS28-206ENST00000520946 NRIP3Q9NQ35 241 aa9.48□□□□□ -0.89
MRPS28-206ENST00000520946 INTS9Q9NV88 658 aaKnown RBP9.48□□□□□ -0.89
MRPS28-206ENST00000520946 RPUSD1Q9UJJ7 312 aaKnown RBP9.48□□□□□ -0.89
MRPS28-206ENST00000520946 LHFPL6Q9Y693 200 aa9.48□□□□□ -0.89
MRPS28-206ENST00000520946 UNC119BA6NIH7 251 aa9.47□□□□□ -0.89
MRPS28-206ENST00000520946 ANKRD30BLA7E2S9 258 aa9.47□□□□□ -0.89
MRPS28-206ENST00000520946 BBIP1A8MTZ0 92 aa9.47□□□□□ -0.89
MRPS28-206ENST00000520946 M0R135 149 aa9.47□□□□□ -0.89
MRPS28-206ENST00000520946 BHLHE40O14503 412 aa9.47□□□□□ -0.89
MRPS28-206ENST00000520946 NPFFO15130 113 aa9.47□□□□□ -0.89
MRPS28-206ENST00000520946 GPR37O15354 613 aa9.47□□□□□ -0.89
MRPS28-206ENST00000520946 XPNPEP2O43895 674 aa9.47□□□□□ -0.89
MRPS28-206ENST00000520946 CDKN2AP42771 156 aaKnown RBP9.47□□□□□ -0.89
MRPS28-206ENST00000520946 SLC7A2P52569 658 aa9.47□□□□□ -0.89
MRPS28-206ENST00000520946 HOXA4Q00056 320 aaPredicted RBP9.47□□□□□ -0.89
MRPS28-206ENST00000520946 IKZF1Q13422 519 aa9.47□□□□□ -0.89
MRPS28-206ENST00000520946 FHL1Q13642 323 aa9.47□□□□□ -0.89
MRPS28-206ENST00000520946 KRT72Q14CN4 511 aa9.47□□□□□ -0.89
MRPS28-206ENST00000520946 LRRC10Q5BKY1 277 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms