RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 TMEM246Q9BRR3 403 aa17.2■□□□□ 0.34
SNHG6-203ENST00000520944 CENPMQ9NSP4 180 aa17.2■□□□□ 0.34
SNHG6-203ENST00000520944 DDX28Q9NUL7 540 aaKnown RBP17.2■□□□□ 0.34
SNHG6-203ENST00000520944 ARHGAP32A7KAX9 2087 aa17.19■□□□□ 0.34
SNHG6-203ENST00000520944 GGT3PA6NGU5 568 aa17.19■□□□□ 0.34
SNHG6-203ENST00000520944 CD300LBA8K4G0 201 aa17.19■□□□□ 0.34
SNHG6-203ENST00000520944 ZNF593O00488 134 aaPredicted RBP17.19■□□□□ 0.34
SNHG6-203ENST00000520944 SOX14O95416 240 aa17.19■□□□□ 0.34
SNHG6-203ENST00000520944 CA6P23280 308 aa17.19■□□□□ 0.34
SNHG6-203ENST00000520944 CD200P41217 278 aa17.19■□□□□ 0.34
SNHG6-203ENST00000520944 ENTPD1P49961 510 aa17.19■□□□□ 0.34
SNHG6-203ENST00000520944 BLVRAP53004 296 aa17.19■□□□□ 0.34
SNHG6-203ENST00000520944 MAB21L1Q13394 359 aa17.19■□□□□ 0.34
SNHG6-203ENST00000520944 CRMP1Q14194 572 aa17.19■□□□□ 0.34
SNHG6-203ENST00000520944 ZNF404Q494X3 552 aa17.19■□□□□ 0.34
SNHG6-203ENST00000520944 CCDC197Q8NCU1 140 aa17.19■□□□□ 0.34
SNHG6-203ENST00000520944 OR8B3Q8NGG8 313 aa17.19■□□□□ 0.34
SNHG6-203ENST00000520944 OR10S1Q8NGN2 331 aa17.19■□□□□ 0.34
SNHG6-203ENST00000520944 NEIL1Q96FI4 390 aaPredicted RBP17.19■□□□□ 0.34
SNHG6-203ENST00000520944 OR8B2Q96RD0 313 aa17.19■□□□□ 0.34
SNHG6-203ENST00000520944 DGCR6LQ9BY27 220 aa17.19■□□□□ 0.34
SNHG6-203ENST00000520944 PRPF19Q9UMS4 504 aaKnown RBP17.19■□□□□ 0.34
SNHG6-203ENST00000520944 COMMD3-BMI1R4GMX3 469 aa17.19■□□□□ 0.34
SNHG6-203ENST00000520944 TMEM89A2RUT3 159 aa17.18■□□□□ 0.34
SNHG6-203ENST00000520944 RIIAD1A6NNX1 92 aa17.18■□□□□ 0.34
SNHG6-203ENST00000520944 GMDSO60547 372 aa17.18■□□□□ 0.34
SNHG6-203ENST00000520944 GYPBP06028 91 aa17.18■□□□□ 0.34
SNHG6-203ENST00000520944 SPI1P17947 270 aa17.18■□□□□ 0.34
SNHG6-203ENST00000520944 CFPP27918 469 aa17.18■□□□□ 0.34
SNHG6-203ENST00000520944 PMELP40967 661 aa17.18■□□□□ 0.34
SNHG6-203ENST00000520944 COMPP49747 757 aaPredicted RBP17.18■□□□□ 0.34
SNHG6-203ENST00000520944 SLC25A1P53007 311 aa17.18■□□□□ 0.34
SNHG6-203ENST00000520944 MS4A2Q01362 244 aa17.18■□□□□ 0.34
SNHG6-203ENST00000520944 ZNF92Q03936 586 aa17.18■□□□□ 0.34
SNHG6-203ENST00000520944 SNAI3Q3KNW1 292 aa17.18■□□□□ 0.34
SNHG6-203ENST00000520944 LYPD4Q6UWN0 246 aa17.18■□□□□ 0.34
SNHG6-203ENST00000520944 LRRN1Q6UXK5 716 aa17.18■□□□□ 0.34
SNHG6-203ENST00000520944 C3orf56Q8N813 242 aa17.18■□□□□ 0.34
SNHG6-203ENST00000520944 ZNF511Q8NB15 262 aa17.18■□□□□ 0.34
SNHG6-203ENST00000520944 OR6K6Q8NGW6 343 aa17.18■□□□□ 0.34
SNHG6-203ENST00000520944 OR4Q3Q8NH05 313 aa17.18■□□□□ 0.34
SNHG6-203ENST00000520944 Q8TCH9 128 aa17.18■□□□□ 0.34
SNHG6-203ENST00000520944 SLAMF6Q96DU3 332 aa17.18■□□□□ 0.34
SNHG6-203ENST00000520944 KCNJ15Q99712 375 aa17.18■□□□□ 0.34
SNHG6-203ENST00000520944 FN3KRPQ9HA64 309 aa17.18■□□□□ 0.34
SNHG6-203ENST00000520944 UFSP2Q9NUQ7 469 aa17.18■□□□□ 0.34
SNHG6-203ENST00000520944 ARMC1Q9NVT9 282 aa17.18■□□□□ 0.34
SNHG6-203ENST00000520944 N6AMT1Q9Y5N5 214 aa17.18■□□□□ 0.34
SNHG6-203ENST00000520944 TENM1Q9UKZ4 2725 aa17.17■□□□□ 0.34
SNHG6-203ENST00000520944 FAM107AO95990 144 aa17.17■□□□□ 0.34
SNHG6-203ENST00000520944 RAP2AP10114 183 aa17.17■□□□□ 0.34
SNHG6-203ENST00000520944 ZNF3P17036 446 aa17.17■□□□□ 0.34
SNHG6-203ENST00000520944 OTX1P32242 354 aaPredicted RBP17.17■□□□□ 0.34
SNHG6-203ENST00000520944 CD80P33681 288 aa17.17■□□□□ 0.34
SNHG6-203ENST00000520944 SLC15A1P46059 708 aa17.17■□□□□ 0.34
SNHG6-203ENST00000520944 PRKXP51817 358 aa17.17■□□□□ 0.34
SNHG6-203ENST00000520944 PAX8Q06710 450 aa17.17■□□□□ 0.34
SNHG6-203ENST00000520944 TEX30Q5JUR7 227 aa17.17■□□□□ 0.34
SNHG6-203ENST00000520944 FAM201AQ5SY85 155 aa17.17■□□□□ 0.34
SNHG6-203ENST00000520944 SIGLECL1Q8N7X8 197 aa17.17■□□□□ 0.34
SNHG6-203ENST00000520944 ZDHHC22Q8N966 263 aa17.17■□□□□ 0.34
SNHG6-203ENST00000520944 OR10G2Q8NGC3 310 aa17.17■□□□□ 0.34
SNHG6-203ENST00000520944 OR2AE1Q8NHA4 323 aa17.17■□□□□ 0.34
SNHG6-203ENST00000520944 RAB40AQ8WXH6 277 aa17.17■□□□□ 0.34
SNHG6-203ENST00000520944 ASB9Q96DX5 294 aa17.17■□□□□ 0.34
SNHG6-203ENST00000520944 ADAT1Q9BUB4 502 aaKnown RBP17.17■□□□□ 0.34
SNHG6-203ENST00000520944 NMNAT2Q9BZQ4 307 aa17.17■□□□□ 0.34
SNHG6-203ENST00000520944 OPA3Q9H6K4 179 aa17.17■□□□□ 0.34
SNHG6-203ENST00000520944 ESM1Q9NQ30 184 aa17.17■□□□□ 0.34
SNHG6-203ENST00000520944 VNN3Q9NY84 501 aa17.17■□□□□ 0.34
SNHG6-203ENST00000520944 ZNF69Q9UC07 566 aa17.17■□□□□ 0.34
SNHG6-203ENST00000520944 ZNF878C9JN71 531 aa17.16■□□□□ 0.34
SNHG6-203ENST00000520944 FAM20BO75063 409 aa17.16■□□□□ 0.34
SNHG6-203ENST00000520944 PITPNBP48739 271 aa17.16■□□□□ 0.34
SNHG6-203ENST00000520944 GK3PQ14409 553 aa17.16■□□□□ 0.34
SNHG6-203ENST00000520944 KCNJ8Q15842 424 aa17.16■□□□□ 0.34
SNHG6-203ENST00000520944 PCK2Q16822 640 aa17.16■□□□□ 0.34
SNHG6-203ENST00000520944 GLYATL3Q5SZD4 288 aa17.16■□□□□ 0.34
SNHG6-203ENST00000520944 PRAMEF6Q5VXH4 476 aa17.16■□□□□ 0.34
SNHG6-203ENST00000520944 DCDC5Q6ZRR9 648 aa17.16■□□□□ 0.34
SNHG6-203ENST00000520944 PLPP7Q8NBV4 271 aa17.16■□□□□ 0.34
SNHG6-203ENST00000520944 TEX47Q8TBZ9 253 aa17.16■□□□□ 0.34
SNHG6-203ENST00000520944 OTULINQ96BN8 352 aa17.16■□□□□ 0.34
SNHG6-203ENST00000520944 CCDC124Q96CT7 223 aaKnown RBP17.16■□□□□ 0.34
SNHG6-203ENST00000520944 MS4A7Q9GZW8 240 aaPredicted RBP17.16■□□□□ 0.34
SNHG6-203ENST00000520944 MRPL15Q9P015 296 aaKnown RBP17.16■□□□□ 0.34
SNHG6-203ENST00000520944 RNF7Q9UBF6 113 aa17.16■□□□□ 0.34
SNHG6-203ENST00000520944 CLN8Q9UBY8 286 aa17.16■□□□□ 0.34
SNHG6-203ENST00000520944 IGHV2-70DA0A0C4DH43 119 aa17.15■□□□□ 0.34
SNHG6-203ENST00000520944 H3BN98 237 aa17.15■□□□□ 0.34
SNHG6-203ENST00000520944 GNGT2O14610 69 aa17.15■□□□□ 0.34
SNHG6-203ENST00000520944 CST1P01037 141 aa17.15■□□□□ 0.34
SNHG6-203ENST00000520944 PPIAL4GP0DN37 164 aa17.15■□□□□ 0.34
SNHG6-203ENST00000520944 CLUP10909 449 aa17.15■□□□□ 0.34
SNHG6-203ENST00000520944 SLC2A1P11166 492 aa17.15■□□□□ 0.34
SNHG6-203ENST00000520944 PSKH1P11801 424 aa17.15■□□□□ 0.34
SNHG6-203ENST00000520944 UBA52P62987 128 aaKnown RBP17.15■□□□□ 0.34
SNHG6-203ENST00000520944 GRB2P62993 217 aaKnown RBP17.15■□□□□ 0.34
SNHG6-203ENST00000520944 MZT1Q08AG7 82 aa17.15■□□□□ 0.34
SNHG6-203ENST00000520944 MPPED2Q15777 294 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms