RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 ZNF69Q9UC07 566 aa13.54□□□□□ -0.24
IGHV3-42-201ENST00000520410 NOP16Q9Y3C1 178 aaKnown RBP13.54□□□□□ -0.24
IGHV3-42-201ENST00000520410 COMMD3-BMI1R4GMX3 469 aa13.54□□□□□ -0.24
IGHV3-42-201ENST00000520410 PPIAL4CA0A0B4J2A2 164 aa13.53□□□□□ -0.24
IGHV3-42-201ENST00000520410 hCG_1807616A0A1W2PRN6 198 aa13.53□□□□□ -0.24
IGHV3-42-201ENST00000520410 A8MXK9 166 aa13.53□□□□□ -0.24
IGHV3-42-201ENST00000520410 F5H0A9 414 aaPredicted RBP13.53□□□□□ -0.24
IGHV3-42-201ENST00000520410 FAM20BO75063 409 aa13.53□□□□□ -0.24
IGHV3-42-201ENST00000520410 ANXA2P07355 339 aaKnown RBP13.53□□□□□ -0.24
IGHV3-42-201ENST00000520410 ZNF3P17036 446 aa13.53□□□□□ -0.24
IGHV3-42-201ENST00000520410 ENTPD1P49961 510 aa13.53□□□□□ -0.24
IGHV3-42-201ENST00000520410 BAMBIQ13145 260 aa13.53□□□□□ -0.24
IGHV3-42-201ENST00000520410 EIF2B1Q14232 305 aaKnown RBP13.53□□□□□ -0.24
IGHV3-42-201ENST00000520410 OR8B8Q15620 311 aa13.53□□□□□ -0.24
IGHV3-42-201ENST00000520410 GFOD2Q3B7J2 385 aa13.53□□□□□ -0.24
IGHV3-42-201ENST00000520410 GLYATL3Q5SZD4 288 aa13.53□□□□□ -0.24
IGHV3-42-201ENST00000520410 OR2T5Q6IEZ7 315 aa13.53□□□□□ -0.24
IGHV3-42-201ENST00000520410 FITM2Q8N6M3 262 aa13.53□□□□□ -0.24
IGHV3-42-201ENST00000520410 ZNF511Q8NB15 262 aa13.53□□□□□ -0.24
IGHV3-42-201ENST00000520410 OR10G2Q8NGC3 310 aa13.53□□□□□ -0.24
IGHV3-42-201ENST00000520410 OR6N2Q8NGY6 317 aa13.53□□□□□ -0.24
IGHV3-42-201ENST00000520410 OR2T29Q8NH02 315 aa13.53□□□□□ -0.24
IGHV3-42-201ENST00000520410 SLAMF6Q96DU3 332 aa13.53□□□□□ -0.24
IGHV3-42-201ENST00000520410 TRIM15Q9C019 465 aa13.53□□□□□ -0.24
IGHV3-42-201ENST00000520410 MUC13Q9H3R2 512 aa13.53□□□□□ -0.24
IGHV3-42-201ENST00000520410 MAGIXQ9H6Y5 334 aa13.53□□□□□ -0.24
IGHV3-42-201ENST00000520410 TMEM165Q9HC07 324 aa13.53□□□□□ -0.24
IGHV3-42-201ENST00000520410 BAIAP2Q9UQB8 552 aa13.53□□□□□ -0.24
IGHV3-42-201ENST00000520410 STAB1Q9NY15 2570 aa13.52□□□□□ -0.24
IGHV3-42-201ENST00000520410 TRAV40A0A0B4J280 105 aa13.52□□□□□ -0.25
IGHV3-42-201ENST00000520410 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.52□□□□□ -0.25
IGHV3-42-201ENST00000520410 CD300LBA8K4G0 201 aa13.52□□□□□ -0.25
IGHV3-42-201ENST00000520410 ZNF593O00488 134 aaPredicted RBP13.52□□□□□ -0.25
IGHV3-42-201ENST00000520410 GRPP07492 148 aa13.52□□□□□ -0.25
IGHV3-42-201ENST00000520410 WNT2P09544 360 aa13.52□□□□□ -0.25
IGHV3-42-201ENST00000520410 CLUP10909 449 aa13.52□□□□□ -0.25
IGHV3-42-201ENST00000520410 CD80P33681 288 aa13.52□□□□□ -0.25
IGHV3-42-201ENST00000520410 UBA52P62987 128 aaKnown RBP13.52□□□□□ -0.25
IGHV3-42-201ENST00000520410 ZNF92Q03936 586 aa13.52□□□□□ -0.25
IGHV3-42-201ENST00000520410 TIGD6Q17RP2 521 aa13.52□□□□□ -0.25
IGHV3-42-201ENST00000520410 MICAQ29983 383 aa13.52□□□□□ -0.25
IGHV3-42-201ENST00000520410 RSPO1Q2MKA7 263 aaPredicted RBP13.52□□□□□ -0.25
IGHV3-42-201ENST00000520410 ZNF404Q494X3 552 aa13.52□□□□□ -0.25
IGHV3-42-201ENST00000520410 SFRP4Q6FHJ7 346 aaPredicted RBP13.52□□□□□ -0.25
IGHV3-42-201ENST00000520410 DRAM2Q6UX65 266 aa13.52□□□□□ -0.25
IGHV3-42-201ENST00000520410 LRRN1Q6UXK5 716 aa13.52□□□□□ -0.25
IGHV3-42-201ENST00000520410 COLCA1Q6ZS62 124 aa13.52□□□□□ -0.25
IGHV3-42-201ENST00000520410 ERI1Q8IV48 349 aaKnown RBP13.52□□□□□ -0.25
IGHV3-42-201ENST00000520410 PARP8Q8N3A8 854 aa13.52□□□□□ -0.25
IGHV3-42-201ENST00000520410 ZDHHC22Q8N966 263 aa13.52□□□□□ -0.25
IGHV3-42-201ENST00000520410 CCDC197Q8NCU1 140 aa13.52□□□□□ -0.25
IGHV3-42-201ENST00000520410 OR4Q3Q8NH05 313 aa13.52□□□□□ -0.25
IGHV3-42-201ENST00000520410 ZNRF4Q8WWF5 429 aa13.52□□□□□ -0.25
IGHV3-42-201ENST00000520410 CCT8L2Q96SF2 557 aa13.52□□□□□ -0.25
IGHV3-42-201ENST00000520410 ESM1Q9NQ30 184 aa13.52□□□□□ -0.25
IGHV3-42-201ENST00000520410 VNN3Q9NY84 501 aa13.52□□□□□ -0.25
IGHV3-42-201ENST00000520410 IL20Q9NYY1 176 aa13.52□□□□□ -0.25
IGHV3-42-201ENST00000520410 DNAJC27Q9NZQ0 273 aa13.52□□□□□ -0.25
IGHV3-42-201ENST00000520410 SVEP1Q4LDE5 3571 aa13.51□□□□□ -0.25
IGHV3-42-201ENST00000520410 IGHV2-70DA0A0C4DH43 119 aa13.51□□□□□ -0.25
IGHV3-42-201ENST00000520410 TCRBV5S2A0A599 114 aa13.51□□□□□ -0.25
IGHV3-42-201ENST00000520410 ZNF878C9JN71 531 aa13.51□□□□□ -0.25
IGHV3-42-201ENST00000520410 C3orf80F5H4A9 247 aa13.51□□□□□ -0.25
IGHV3-42-201ENST00000520410 SPI1P17947 270 aa13.51□□□□□ -0.25
IGHV3-42-201ENST00000520410 CALB2P22676 271 aa13.51□□□□□ -0.25
IGHV3-42-201ENST00000520410 POU1F1P28069 291 aa13.51□□□□□ -0.25
IGHV3-42-201ENST00000520410 CD200P41217 278 aa13.51□□□□□ -0.25
IGHV3-42-201ENST00000520410 CX3CR1P49238 355 aa13.51□□□□□ -0.25
IGHV3-42-201ENST00000520410 MAB21L1Q13394 359 aa13.51□□□□□ -0.25
IGHV3-42-201ENST00000520410 TRIM25Q14258 630 aaKnown RBP13.51□□□□□ -0.25
IGHV3-42-201ENST00000520410 MPPED2Q15777 294 aa13.51□□□□□ -0.25
IGHV3-42-201ENST00000520410 KRTAP27-1Q3LI81 207 aa13.51□□□□□ -0.25
IGHV3-42-201ENST00000520410 LCN8Q6JVE9 175 aa13.51□□□□□ -0.25
IGHV3-42-201ENST00000520410 LYPD2Q6UXB3 125 aa13.51□□□□□ -0.25
IGHV3-42-201ENST00000520410 BCL6BQ8N143 479 aaPredicted RBP13.51□□□□□ -0.25
IGHV3-42-201ENST00000520410 ARHGAP24Q8N264 748 aa13.51□□□□□ -0.25
IGHV3-42-201ENST00000520410 IQCF1Q8N6M8 205 aa13.51□□□□□ -0.25
IGHV3-42-201ENST00000520410 OR10S1Q8NGN2 331 aa13.51□□□□□ -0.25
IGHV3-42-201ENST00000520410 OR8S1Q8NH09 359 aa13.51□□□□□ -0.25
IGHV3-42-201ENST00000520410 KCNJ15Q99712 375 aa13.51□□□□□ -0.25
IGHV3-42-201ENST00000520410 NUDT16L1Q9BRJ7 211 aaKnown RBP13.51□□□□□ -0.25
IGHV3-42-201ENST00000520410 SLC22A4Q9H015 551 aa13.51□□□□□ -0.25
IGHV3-42-201ENST00000520410 MED20Q9H944 212 aa13.51□□□□□ -0.25
IGHV3-42-201ENST00000520410 BRD7Q9NPI1 651 aa13.51□□□□□ -0.25
IGHV3-42-201ENST00000520410 C1orf123Q9NWV4 160 aa13.51□□□□□ -0.25
IGHV3-42-201ENST00000520410 RNF7Q9UBF6 113 aa13.51□□□□□ -0.25
IGHV3-42-201ENST00000520410 TMEM89A2RUT3 159 aa13.5□□□□□ -0.25
IGHV3-42-201ENST00000520410 DNAJC9-AS1A6NH13 148 aa13.5□□□□□ -0.25
IGHV3-42-201ENST00000520410 FAM183AA6NL82 134 aa13.5□□□□□ -0.25
IGHV3-42-201ENST00000520410 ANKRD30BLA7E2S9 258 aa13.5□□□□□ -0.25
IGHV3-42-201ENST00000520410 E2F6O75461 281 aa13.5□□□□□ -0.25
IGHV3-42-201ENST00000520410 CST1P01037 141 aa13.5□□□□□ -0.25
IGHV3-42-201ENST00000520410 FSHBP01225 129 aa13.5□□□□□ -0.25
IGHV3-42-201ENST00000520410 IGHV4-38-2P0DP08 117 aa13.5□□□□□ -0.25
IGHV3-42-201ENST00000520410 PSKH1P11801 424 aa13.5□□□□□ -0.25
IGHV3-42-201ENST00000520410 PAICSP22234 425 aaKnown RBP13.5□□□□□ -0.25
IGHV3-42-201ENST00000520410 PMELP40967 661 aa13.5□□□□□ -0.25
IGHV3-42-201ENST00000520410 MAGEA2P43356 314 aa13.5□□□□□ -0.25
IGHV3-42-201ENST00000520410 SLC15A1P46059 708 aa13.5□□□□□ -0.25
IGHV3-42-201ENST00000520410 HMGA2P52926 109 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 210.6 ms