RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 HOXA4Q00056 320 aaPredicted RBP10.37□□□□□ -0.75
CSMD1-205ENST00000519623 ZNF92Q03936 586 aa10.37□□□□□ -0.75
CSMD1-205ENST00000519623 SLC9A3R2Q15599 337 aa10.37□□□□□ -0.75
CSMD1-205ENST00000519623 PCK2Q16822 640 aa10.37□□□□□ -0.75
CSMD1-205ENST00000519623 SNAI3Q3KNW1 292 aa10.37□□□□□ -0.75
CSMD1-205ENST00000519623 PRAMEF6Q5VXH4 476 aa10.37□□□□□ -0.75
CSMD1-205ENST00000519623 WDR25Q64LD2 544 aaPredicted RBP10.37□□□□□ -0.75
CSMD1-205ENST00000519623 LYPD4Q6UWN0 246 aa10.37□□□□□ -0.75
CSMD1-205ENST00000519623 BTNL3Q6UXE8 466 aa10.37□□□□□ -0.75
CSMD1-205ENST00000519623 DEFB107AQ8IZN7 70 aa10.37□□□□□ -0.75
CSMD1-205ENST00000519623 PARP8Q8N3A8 854 aa10.37□□□□□ -0.75
CSMD1-205ENST00000519623 C19orf18Q8NEA5 215 aa10.37□□□□□ -0.75
CSMD1-205ENST00000519623 OR9Q2Q8NGE9 314 aa10.37□□□□□ -0.75
CSMD1-205ENST00000519623 OR8B3Q8NGG8 313 aa10.37□□□□□ -0.75
CSMD1-205ENST00000519623 OR51L1Q8NGJ5 315 aa10.37□□□□□ -0.75
CSMD1-205ENST00000519623 OR4C15Q8NGM1 316 aa10.37□□□□□ -0.75
CSMD1-205ENST00000519623 OR8D4Q8NGM9 314 aa10.37□□□□□ -0.75
CSMD1-205ENST00000519623 SPRYD4Q8WW59 207 aaPredicted RBP10.37□□□□□ -0.75
CSMD1-205ENST00000519623 ZNF799Q96GE5 643 aa10.37□□□□□ -0.75
CSMD1-205ENST00000519623 PLEKHA8Q96JA3 519 aa10.37□□□□□ -0.75
CSMD1-205ENST00000519623 OR8B2Q96RD0 313 aa10.37□□□□□ -0.75
CSMD1-205ENST00000519623 TRIM15Q9C019 465 aa10.37□□□□□ -0.75
CSMD1-205ENST00000519623 MS4A7Q9GZW8 240 aaPredicted RBP10.37□□□□□ -0.75
CSMD1-205ENST00000519623 UFSP2Q9NUQ7 469 aa10.37□□□□□ -0.75
CSMD1-205ENST00000519623 TNFRSF11BO00300 401 aa10.36□□□□□ -0.75
CSMD1-205ENST00000519623 RNASE1P07998 156 aaKnown RBP10.36□□□□□ -0.75
CSMD1-205ENST00000519623 IRF2P14316 349 aa10.36□□□□□ -0.75
CSMD1-205ENST00000519623 RPL13AP3Q6NVV1 102 aa10.36□□□□□ -0.75
CSMD1-205ENST00000519623 C16orf89Q6UX73 402 aa10.36□□□□□ -0.75
CSMD1-205ENST00000519623 CYP2R1Q6VVX0 501 aa10.36□□□□□ -0.75
CSMD1-205ENST00000519623 DCDC5Q6ZRR9 648 aa10.36□□□□□ -0.75
CSMD1-205ENST00000519623 RASSF6Q6ZTQ3 369 aa10.36□□□□□ -0.75
CSMD1-205ENST00000519623 NLRC3Q7RTR2 1065 aa10.36□□□□□ -0.75
CSMD1-205ENST00000519623 MRPL21Q7Z2W9 205 aaKnown RBP10.36□□□□□ -0.75
CSMD1-205ENST00000519623 LNX2Q8N448 690 aa10.36□□□□□ -0.75
CSMD1-205ENST00000519623 LINC00471Q8N535 108 aa10.36□□□□□ -0.75
CSMD1-205ENST00000519623 FITM2Q8N6M3 262 aa10.36□□□□□ -0.75
CSMD1-205ENST00000519623 ZNF511Q8NB15 262 aa10.36□□□□□ -0.75
CSMD1-205ENST00000519623 SLC37A3Q8NCC5 494 aa10.36□□□□□ -0.75
CSMD1-205ENST00000519623 PROKR2Q8NFJ6 384 aa10.36□□□□□ -0.75
CSMD1-205ENST00000519623 OR11L1Q8NGX0 322 aa10.36□□□□□ -0.75
CSMD1-205ENST00000519623 OR2T4Q8NH00 348 aa10.36□□□□□ -0.75
CSMD1-205ENST00000519623 OR2AE1Q8NHA4 323 aa10.36□□□□□ -0.75
CSMD1-205ENST00000519623 SPTSSAQ969W0 71 aa10.36□□□□□ -0.75
CSMD1-205ENST00000519623 NUDT16L1Q9BRJ7 211 aaKnown RBP10.36□□□□□ -0.75
CSMD1-205ENST00000519623 NMNAT2Q9BZQ4 307 aa10.36□□□□□ -0.75
CSMD1-205ENST00000519623 SLC22A4Q9H015 551 aa10.36□□□□□ -0.75
CSMD1-205ENST00000519623 ZMAT3Q9HA38 289 aaKnown RBP10.36□□□□□ -0.75
CSMD1-205ENST00000519623 RNF7Q9UBF6 113 aa10.36□□□□□ -0.75
CSMD1-205ENST00000519623 CLN8Q9UBY8 286 aa10.36□□□□□ -0.75
CSMD1-205ENST00000519623 ARL2BPQ9Y2Y0 163 aa10.36□□□□□ -0.75
CSMD1-205ENST00000519623 TCRBV5S2A0A599 114 aa10.35□□□□□ -0.75
CSMD1-205ENST00000519623 C22orf46C9J442 243 aa10.35□□□□□ -0.75
CSMD1-205ENST00000519623 ZNF593O00488 134 aaPredicted RBP10.35□□□□□ -0.75
CSMD1-205ENST00000519623 PHYHO14832 338 aa10.35□□□□□ -0.75
CSMD1-205ENST00000519623 TMPRSS2O15393 492 aa10.35□□□□□ -0.75
CSMD1-205ENST00000519623 GMDSO60547 372 aa10.35□□□□□ -0.75
CSMD1-205ENST00000519623 ATP6V1B2P21281 511 aa10.35□□□□□ -0.75
CSMD1-205ENST00000519623 MAGEA2P43356 314 aa10.35□□□□□ -0.75
CSMD1-205ENST00000519623 MTNR1AP48039 350 aa10.35□□□□□ -0.75
CSMD1-205ENST00000519623 GYS2P54840 703 aa10.35□□□□□ -0.75
CSMD1-205ENST00000519623 PPP1R8Q12972 351 aaKnown RBP10.35□□□□□ -0.75
CSMD1-205ENST00000519623 OR8G1Q15617 311 aa10.35□□□□□ -0.75
CSMD1-205ENST00000519623 TEX30Q5JUR7 227 aa10.35□□□□□ -0.75
CSMD1-205ENST00000519623 GLYATL3Q5SZD4 288 aa10.35□□□□□ -0.75
CSMD1-205ENST00000519623 DRAM2Q6UX65 266 aa10.35□□□□□ -0.75
CSMD1-205ENST00000519623 DCXRQ7Z4W1 244 aa10.35□□□□□ -0.75
CSMD1-205ENST00000519623 PLPP7Q8NBV4 271 aa10.35□□□□□ -0.75
CSMD1-205ENST00000519623 OR52L1Q8NGH7 329 aa10.35□□□□□ -0.75
CSMD1-205ENST00000519623 OR9Q1Q8NGQ5 310 aa10.35□□□□□ -0.75
CSMD1-205ENST00000519623 TAF15Q92804 592 aaKnown RBP eCLIP10.35□□□□□ -0.75
CSMD1-205ENST00000519623 PRDM13Q9H4Q3 707 aa10.35□□□□□ -0.75
CSMD1-205ENST00000519623 ACTR3BQ9P1U1 418 aa10.35□□□□□ -0.75
CSMD1-205ENST00000519623 COMMD3-BMI1R4GMX3 469 aa10.35□□□□□ -0.75
CSMD1-205ENST00000519623 GGT3PA6NGU5 568 aa10.34□□□□□ -0.75
CSMD1-205ENST00000519623 LGALS8O00214 317 aa10.34□□□□□ -0.75
CSMD1-205ENST00000519623 CCNB2O95067 398 aa10.34□□□□□ -0.75
CSMD1-205ENST00000519623 GYPBP06028 91 aa10.34□□□□□ -0.75
CSMD1-205ENST00000519623 FMO3P31513 532 aa10.34□□□□□ -0.75
CSMD1-205ENST00000519623 PRKXP51817 358 aa10.34□□□□□ -0.75
CSMD1-205ENST00000519623 SLC25A1P53007 311 aa10.34□□□□□ -0.75
CSMD1-205ENST00000519623 FGF12P61328 243 aa10.34□□□□□ -0.75
CSMD1-205ENST00000519623 CRMP1Q14194 572 aa10.34□□□□□ -0.75
CSMD1-205ENST00000519623 SFRP4Q6FHJ7 346 aaPredicted RBP10.34□□□□□ -0.75
CSMD1-205ENST00000519623 SHISA2Q6UWI4 295 aa10.34□□□□□ -0.75
CSMD1-205ENST00000519623 OR4Q3Q8NH05 313 aa10.34□□□□□ -0.75
CSMD1-205ENST00000519623 SLC25A28Q96A46 364 aa10.34□□□□□ -0.75
CSMD1-205ENST00000519623 SLAMF6Q96DU3 332 aa10.34□□□□□ -0.75
CSMD1-205ENST00000519623 KCNJ15Q99712 375 aa10.34□□□□□ -0.75
CSMD1-205ENST00000519623 TSSK6Q9BXA6 273 aa10.34□□□□□ -0.75
CSMD1-205ENST00000519623 FN3KRPQ9HA64 309 aa10.34□□□□□ -0.75
CSMD1-205ENST00000519623 CENPMQ9NSP4 180 aa10.34□□□□□ -0.75
CSMD1-205ENST00000519623 NDE1Q9NXR1 346 aa10.34□□□□□ -0.75
CSMD1-205ENST00000519623 VNN3Q9NY84 501 aa10.34□□□□□ -0.75
CSMD1-205ENST00000519623 MRPL15Q9P015 296 aaKnown RBP10.34□□□□□ -0.75
CSMD1-205ENST00000519623 CTSZQ9UBR2 303 aa10.34□□□□□ -0.75
CSMD1-205ENST00000519623 NOP16Q9Y3C1 178 aaKnown RBP10.34□□□□□ -0.75
CSMD1-205ENST00000519623 TRRAPQ9Y4A5 3859 aa10.34□□□□□ -0.75
CSMD1-205ENST00000519623 MEGF8Q7Z7M0 2845 aa10.34□□□□□ -0.75
CSMD1-205ENST00000519623 TRAV40A0A0B4J280 105 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms