RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 ZNF846Q147U1 533 aa10.65□□□□□ -0.7
TRAPPC9-206ENST00000519482 TSTQ16762 297 aaKnown RBP10.65□□□□□ -0.7
TRAPPC9-206ENST00000519482 NKPD1Q17RQ9 610 aa10.65□□□□□ -0.7
TRAPPC9-206ENST00000519482 KRTAP24-1Q3LI83 254 aa10.65□□□□□ -0.7
TRAPPC9-206ENST00000519482 KLHL36Q8N4N3 616 aa10.65□□□□□ -0.7
TRAPPC9-206ENST00000519482 PAQR4Q8N4S7 273 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC9-206ENST00000519482 ACBD7Q8N6N7 88 aa10.65□□□□□ -0.7
TRAPPC9-206ENST00000519482 SYT14Q8NB59 555 aa10.65□□□□□ -0.7
TRAPPC9-206ENST00000519482 OR13C2Q8NGS9 318 aa10.65□□□□□ -0.7
TRAPPC9-206ENST00000519482 ZNF519Q8TB69 540 aa10.65□□□□□ -0.7
TRAPPC9-206ENST00000519482 SYNPRQ8TBG9 265 aa10.65□□□□□ -0.7
TRAPPC9-206ENST00000519482 C11orf40Q8WZ69 217 aa10.65□□□□□ -0.7
TRAPPC9-206ENST00000519482 OPALINQ96PE5 141 aa10.65□□□□□ -0.7
TRAPPC9-206ENST00000519482 GPX7Q96SL4 187 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC9-206ENST00000519482 TEAD3Q99594 435 aa10.65□□□□□ -0.7
TRAPPC9-206ENST00000519482 ZNF416Q9BWM5 594 aa10.65□□□□□ -0.7
TRAPPC9-206ENST00000519482 BCL2L14Q9BZR8 327 aa10.65□□□□□ -0.7
TRAPPC9-206ENST00000519482 WDR12Q9GZL7 423 aaKnown RBP10.65□□□□□ -0.7
TRAPPC9-206ENST00000519482 TXNIPQ9H3M7 391 aa10.65□□□□□ -0.7
TRAPPC9-206ENST00000519482 HMG20AQ9NP66 347 aa10.65□□□□□ -0.7
TRAPPC9-206ENST00000519482 HINT3Q9NQE9 182 aaKnown RBP10.65□□□□□ -0.7
TRAPPC9-206ENST00000519482 SLCO1C1Q9NYB5 712 aa10.65□□□□□ -0.7
TRAPPC9-206ENST00000519482 CLEC2DQ9UHP7 191 aa10.65□□□□□ -0.7
TRAPPC9-206ENST00000519482 FZR1Q9UM11 496 aa10.65□□□□□ -0.7
TRAPPC9-206ENST00000519482 SSR3Q9UNL2 185 aa10.65□□□□□ -0.7
TRAPPC9-206ENST00000519482 HIF3AQ9Y2N7 669 aa10.65□□□□□ -0.7
TRAPPC9-206ENST00000519482 CAB39Q9Y376 341 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC9-206ENST00000519482 C17orf100A8MU93 164 aa10.64□□□□□ -0.71
TRAPPC9-206ENST00000519482 CLDN25C9JDP6 229 aa10.64□□□□□ -0.71
TRAPPC9-206ENST00000519482 J3QRE1 110 aa10.64□□□□□ -0.71
TRAPPC9-206ENST00000519482 TFP02787 698 aa10.64□□□□□ -0.71
TRAPPC9-206ENST00000519482 NAT2P11245 290 aa10.64□□□□□ -0.71
TRAPPC9-206ENST00000519482 CCL2P13500 99 aa10.64□□□□□ -0.71
TRAPPC9-206ENST00000519482 APLNRP35414 380 aa10.64□□□□□ -0.71
TRAPPC9-206ENST00000519482 ETV1P50549 477 aa10.64□□□□□ -0.71
TRAPPC9-206ENST00000519482 UCP2P55851 309 aa10.64□□□□□ -0.71
TRAPPC9-206ENST00000519482 PCGF3Q3KNV8 242 aa10.64□□□□□ -0.71
TRAPPC9-206ENST00000519482 SLC35D3Q5M8T2 416 aa10.64□□□□□ -0.71
TRAPPC9-206ENST00000519482 ZNF362Q5T0B9 420 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC9-206ENST00000519482 LIPNQ5VXI9 398 aa10.64□□□□□ -0.71
TRAPPC9-206ENST00000519482 PLBD1Q6P4A8 553 aa10.64□□□□□ -0.71
TRAPPC9-206ENST00000519482 BCDIN3DQ7Z5W3 292 aaKnown RBP10.64□□□□□ -0.71
TRAPPC9-206ENST00000519482 LRRC18Q8N456 261 aa10.64□□□□□ -0.71
TRAPPC9-206ENST00000519482 RFLNBQ8N5W9 214 aa10.64□□□□□ -0.71
TRAPPC9-206ENST00000519482 SLC37A3Q8NCC5 494 aa10.64□□□□□ -0.71
TRAPPC9-206ENST00000519482 OR6Q1Q8NGQ2 317 aa10.64□□□□□ -0.71
TRAPPC9-206ENST00000519482 MOSPD2Q8NHP6 518 aa10.64□□□□□ -0.71
TRAPPC9-206ENST00000519482 FNDC8Q8TC99 324 aa10.64□□□□□ -0.71
TRAPPC9-206ENST00000519482 SNX33Q8WV41 574 aa10.64□□□□□ -0.71
TRAPPC9-206ENST00000519482 MRPL48Q96GC5 212 aaKnown RBP10.64□□□□□ -0.71
TRAPPC9-206ENST00000519482 NRIP3Q9NQ35 241 aa10.64□□□□□ -0.71
TRAPPC9-206ENST00000519482 ZNF275Q9NSD4 429 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC9-206ENST00000519482 NDUFB11Q9NX14 153 aa10.64□□□□□ -0.71
TRAPPC9-206ENST00000519482 NKIRAS2Q9NYR9 191 aa10.64□□□□□ -0.71
TRAPPC9-206ENST00000519482 CCDC59Q9P031 241 aaKnown RBP10.64□□□□□ -0.71
TRAPPC9-206ENST00000519482 TAAR3PQ9P1P4 343 aa10.64□□□□□ -0.71
TRAPPC9-206ENST00000519482 STUB1Q9UNE7 303 aa10.64□□□□□ -0.71
TRAPPC9-206ENST00000519482 NCR1O76036 304 aa10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 SLC2A10O95528 541 aa10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 LIMS3P0CW19 117 aa10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 LIMS4P0CW20 117 aa10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 NCS1P62166 190 aa10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 LSM3P62310 102 aaKnown RBP10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 ACTC1P68032 377 aa10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 ACTA1P68133 377 aa10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 HSF2Q03933 536 aa10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 FHL1Q13642 323 aa10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 SSX1Q16384 188 aa10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 ZNF404Q494X3 552 aa10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 ALG10Q5BKT4 473 aa10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 FAM27BQ5VT28 67 aa10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 GPR139Q6DWJ6 353 aa10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 THSD4Q6ZMP0 1018 aa10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 GLCCI1Q86VQ1 547 aa10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 C1orf174Q8IYL3 243 aa10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 ZNF485Q8NCK3 441 aa10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 CLDND2Q8NHS1 167 aa10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 MCFD2Q8NI22 146 aa10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 NDNFQ8TB73 568 aa10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 UFD1Q92890 307 aa10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 YIPF5Q969M3 257 aa10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 NABP1Q96AH0 204 aa10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 ERMAPQ96PL5 475 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 RBP7Q96R05 134 aa10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 ALG12Q9BV10 488 aa10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 SLIRPQ9GZT3 109 aaKnown RBP10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 NXF2Q9GZY0 626 aaKnown RBP10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 OR51E2Q9H255 320 aa10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 BABAM2Q9NXR7 383 aa10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 GSTK1Q9Y2Q3 226 aa10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 UGT2A1Q9Y4X1 527 aa10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 ANK2Q01484 3957 aa10.63□□□□□ -0.71
TRAPPC9-206ENST00000519482 A0A075B6Q4 140 aa10.62□□□□□ -0.71
TRAPPC9-206ENST00000519482 TRAV27A0A087WT01 109 aa10.62□□□□□ -0.71
TRAPPC9-206ENST00000519482 LOC100506127A0A0U1RQW1 187 aa10.62□□□□□ -0.71
TRAPPC9-206ENST00000519482 RP2O75695 350 aa10.62□□□□□ -0.71
TRAPPC9-206ENST00000519482 TXNDC12O95881 172 aa10.62□□□□□ -0.71
TRAPPC9-206ENST00000519482 IGHV3-13P01766 116 aa10.62□□□□□ -0.71
TRAPPC9-206ENST00000519482 IGHMP01871 453 aa10.62□□□□□ -0.71
TRAPPC9-206ENST00000519482 MT-ND5P03915 603 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms