RNA–Protein interactions for RNA: ENST00000515838.2

RBM4-209, Transcript of RNA binding motif protein 4, human

TSL 2

Gene RBM4, Length 943 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM4-209	ENST00000515838	OR2T33	Q8NG76	320 aa		12.51	□□□□□ -0.41
RBM4-209	ENST00000515838	SGMS2	Q8NHU3	365 aa		12.51	□□□□□ -0.41
RBM4-209	ENST00000515838	MAP6	Q96JE9	813 aa		12.51	□□□□□ -0.41
RBM4-209	ENST00000515838	BTBD10	Q9BSF8	475 aa		12.51	□□□□□ -0.41
RBM4-209	ENST00000515838	DGCR6L	Q9BY27	220 aa		12.51	□□□□□ -0.41
RBM4-209	ENST00000515838	EGLN3	Q9H6Z9	239 aa		12.51	□□□□□ -0.41
RBM4-209	ENST00000515838	REEP1	Q9H902	201 aa		12.51	□□□□□ -0.41
RBM4-209	ENST00000515838	FN3KRP	Q9HA64	309 aa		12.51	□□□□□ -0.41
RBM4-209	ENST00000515838	TBC1D23	Q9NUY8	699 aa		12.51	□□□□□ -0.41
RBM4-209	ENST00000515838	COMMD3-BMI1	R4GMX3	469 aa		12.51	□□□□□ -0.41
RBM4-209	ENST00000515838	IGHV2-70D	A0A0C4DH43	119 aa		12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	CD300LB	A8K4G0	201 aa		12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	ZNF878	C9JN71	531 aa		12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	CLDN34	H7C241	214 aa		12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	XRCC2	O43543	280 aa		12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	NDUFA2	O43678	99 aa		12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	CYB5R3	P00387	301 aa	Predicted RBP	12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	PRTN3	P24158	256 aa		12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	DDOST	P39656	456 aa		12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	PITPNB	P48739	271 aa		12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	ENTPD1	P49961	510 aa		12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	SEC61A1	P61619	476 aa	Known RBP	12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	PAX2	Q02962	417 aa		12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	FOXL1	Q12952	345 aa		12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	TRIM25	Q14258	630 aa	Known RBP	12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	OR8G1	Q15617	311 aa		12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	CD300LD	Q6UXZ3	194 aa		12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	DHFR2	Q86XF0	187 aa		12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	ZDHHC22	Q8N966	263 aa		12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	AQP11	Q8NBQ7	271 aa		12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	OR9Q2	Q8NGE9	314 aa		12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	ZNF420	Q8TAQ5	688 aa	Predicted RBP	12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	RAB40A	Q8WXH6	277 aa		12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	SLCO4A1	Q96BD0	722 aa		12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	UPRT	Q96BW1	309 aa		12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	TMEM246	Q9BRR3	403 aa		12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	FN3K	Q9H479	309 aa		12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	TOR3A	Q9H497	397 aa		12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	WDR76	Q9H967	626 aa		12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	CLN8	Q9UBY8	286 aa		12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	PRPF19	Q9UMS4	504 aa	Known RBP	12.5	□□□□□ -0.41
RBM4-209	ENST00000515838	ARRDC5	A6NEK1	342 aa		12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	RIIAD1	A6NNX1	92 aa		12.49	□□□□□ -0.41
RBM4-209	ENST00000515838		B2RBV5	119 aa		12.49	□□□□□ -0.41
RBM4-209	ENST00000515838		H0YL77	283 aa		12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	RGS9	O75916	674 aa	Predicted RBP	12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	GAST	P01350	101 aa		12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	ZNF3	P17036	446 aa		12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	ATP6V1B2	P21281	511 aa		12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	CALB2	P22676	271 aa		12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	CFL1	P23528	166 aa	Known RBP	12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	GRB2	P62993	217 aa	Known RBP	12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	MAB21L1	Q13394	359 aa		12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	TAF13	Q15543	124 aa		12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	SNCB	Q16143	134 aa		12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	MICA	Q29983	383 aa		12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	ZNF362	Q5T0B9	420 aa	Predicted RBP	12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	CD276	Q5ZPR3	534 aa		12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	OR2T5	Q6IEZ7	315 aa		12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	CYP2R1	Q6VVX0	501 aa		12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	DCXR	Q7Z4W1	244 aa		12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	CYB561A3	Q8NBI2	242 aa		12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	SLC37A3	Q8NCC5	494 aa		12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	OR2T29	Q8NH02	315 aa		12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	DACT3	Q96B18	629 aa	Predicted RBP	12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	NSL1	Q96IY1	281 aa		12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	KCNJ15	Q99712	375 aa		12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	COPS4	Q9BT78	406 aa		12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	ADAT1	Q9BUB4	502 aa	Known RBP	12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	TSSK6	Q9BXA6	273 aa		12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	NMNAT2	Q9BZQ4	307 aa		12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	MS4A7	Q9GZW8	240 aa	Predicted RBP	12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	C14orf119	Q9NWQ9	140 aa		12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	KIF17	Q9P2E2	1029 aa		12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	RNF7	Q9UBF6	113 aa		12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	SAMHD1	Q9Y3Z3	626 aa	Known RBP	12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	MGAM2	Q2M2H8	2515 aa		12.49	□□□□□ -0.41
RBM4-209	ENST00000515838	KIR2DS1	A0A191URI9	304 aa		12.48	□□□□□ -0.41
RBM4-209	ENST00000515838	TCRBV5S2	A0A599	114 aa		12.48	□□□□□ -0.41
RBM4-209	ENST00000515838	GGT3P	A6NGU5	568 aa		12.48	□□□□□ -0.41
RBM4-209	ENST00000515838	ENSA	O43768	121 aa	Known RBP	12.48	□□□□□ -0.41
RBM4-209	ENST00000515838	HLA-DPB1	P04440	258 aa		12.48	□□□□□ -0.41
RBM4-209	ENST00000515838	LIPF	P07098	398 aa		12.48	□□□□□ -0.41
RBM4-209	ENST00000515838	PYCR1	P32322	319 aa		12.48	□□□□□ -0.41
RBM4-209	ENST00000515838	CD80	P33681	288 aa		12.48	□□□□□ -0.41
RBM4-209	ENST00000515838	PSMB10	P40306	273 aa		12.48	□□□□□ -0.41
RBM4-209	ENST00000515838	ZSCAN26	Q16670	478 aa		12.48	□□□□□ -0.41
RBM4-209	ENST00000515838	KLF17	Q5JT82	389 aa	Predicted RBP	12.48	□□□□□ -0.41
RBM4-209	ENST00000515838	PARP8	Q8N3A8	854 aa		12.48	□□□□□ -0.41
RBM4-209	ENST00000515838	FTMT	Q8N4E7	242 aa		12.48	□□□□□ -0.41
RBM4-209	ENST00000515838	OR10S1	Q8NGN2	331 aa		12.48	□□□□□ -0.41
RBM4-209	ENST00000515838	SLC25A28	Q96A46	364 aa		12.48	□□□□□ -0.41
RBM4-209	ENST00000515838	ASB9	Q96DX5	294 aa		12.48	□□□□□ -0.41
RBM4-209	ENST00000515838	PLA2G12A	Q9BZM1	189 aa		12.48	□□□□□ -0.41
RBM4-209	ENST00000515838	ESM1	Q9NQ30	184 aa		12.48	□□□□□ -0.41
RBM4-209	ENST00000515838	CMC2	Q9NRP2	79 aa		12.48	□□□□□ -0.41
RBM4-209	ENST00000515838	TRAV38-1	A0A0B4J264	116 aa		12.47	□□□□□ -0.41
RBM4-209	ENST00000515838	FAM20B	O75063	409 aa		12.47	□□□□□ -0.41
RBM4-209	ENST00000515838	PLAT	P00750	562 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms