RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 F5H0A9 414 aaPredicted RBP11.47□□□□□ -0.57
TCOF1-215ENST00000515516 H3BN98 237 aa11.47□□□□□ -0.57
TCOF1-215ENST00000515516 TRAPPC2LH3BP13 241 aa11.47□□□□□ -0.57
TCOF1-215ENST00000515516 WNT2P09544 360 aa11.47□□□□□ -0.57
TCOF1-215ENST00000515516 RAP2AP10114 183 aa11.47□□□□□ -0.57
TCOF1-215ENST00000515516 ZNF12P17014 697 aa11.47□□□□□ -0.57
TCOF1-215ENST00000515516 SPI1P17947 270 aa11.47□□□□□ -0.57
TCOF1-215ENST00000515516 CA6P23280 308 aa11.47□□□□□ -0.57
TCOF1-215ENST00000515516 SLC15A1P46059 708 aa11.47□□□□□ -0.57
TCOF1-215ENST00000515516 PRSS12P56730 875 aa11.47□□□□□ -0.57
TCOF1-215ENST00000515516 SEC61A1P61619 476 aaKnown RBP11.47□□□□□ -0.57
TCOF1-215ENST00000515516 GNB2P62879 340 aa11.47□□□□□ -0.57
TCOF1-215ENST00000515516 MS4A2Q01362 244 aa11.47□□□□□ -0.57
TCOF1-215ENST00000515516 MZT1Q08AG7 82 aa11.47□□□□□ -0.57
TCOF1-215ENST00000515516 LRRN1Q6UXK5 716 aa11.47□□□□□ -0.57
TCOF1-215ENST00000515516 KLBQ86Z14 1044 aa11.47□□□□□ -0.57
TCOF1-215ENST00000515516 ZNF511Q8NB15 262 aa11.47□□□□□ -0.57
TCOF1-215ENST00000515516 DEFB108BQ8NET1 73 aa11.47□□□□□ -0.57
TCOF1-215ENST00000515516 OR10G2Q8NGC3 310 aa11.47□□□□□ -0.57
TCOF1-215ENST00000515516 OR8B3Q8NGG8 313 aa11.47□□□□□ -0.57
TCOF1-215ENST00000515516 GIPC3Q8TF64 312 aa11.47□□□□□ -0.57
TCOF1-215ENST00000515516 CCDC124Q96CT7 223 aaKnown RBP11.47□□□□□ -0.57
TCOF1-215ENST00000515516 SLAMF6Q96DU3 332 aa11.47□□□□□ -0.57
TCOF1-215ENST00000515516 ASB9Q96DX5 294 aa11.47□□□□□ -0.57
TCOF1-215ENST00000515516 NEIL1Q96FI4 390 aaPredicted RBP11.47□□□□□ -0.57
TCOF1-215ENST00000515516 OR8B2Q96RD0 313 aa11.47□□□□□ -0.57
TCOF1-215ENST00000515516 OPA3Q9H6K4 179 aa11.47□□□□□ -0.57
TCOF1-215ENST00000515516 SP140LQ9H930 580 aa11.47□□□□□ -0.57
TCOF1-215ENST00000515516 FN3KRPQ9HA64 309 aa11.47□□□□□ -0.57
TCOF1-215ENST00000515516 NUP50Q9UKX7 468 aa11.47□□□□□ -0.57
TCOF1-215ENST00000515516 INSIG2Q9Y5U4 225 aa11.47□□□□□ -0.57
TCOF1-215ENST00000515516 COMMD3-BMI1R4GMX3 469 aa11.47□□□□□ -0.57
TCOF1-215ENST00000515516 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.46□□□□□ -0.57
TCOF1-215ENST00000515516 A0A1B0GWJ7 208 aa11.46□□□□□ -0.57
TCOF1-215ENST00000515516 ZNF878C9JN71 531 aa11.46□□□□□ -0.57
TCOF1-215ENST00000515516 GMDSO60547 372 aa11.46□□□□□ -0.57
TCOF1-215ENST00000515516 FSTL3O95633 263 aa11.46□□□□□ -0.57
TCOF1-215ENST00000515516 CST1P01037 141 aa11.46□□□□□ -0.57
TCOF1-215ENST00000515516 GYPBP06028 91 aa11.46□□□□□ -0.57
TCOF1-215ENST00000515516 HOXB6P17509 224 aaKnown RBP11.46□□□□□ -0.57
TCOF1-215ENST00000515516 PAICSP22234 425 aaKnown RBP11.46□□□□□ -0.57
TCOF1-215ENST00000515516 HSD11B1P28845 292 aa11.46□□□□□ -0.57
TCOF1-215ENST00000515516 CD200P41217 278 aa11.46□□□□□ -0.57
TCOF1-215ENST00000515516 GATA4P43694 442 aa11.46□□□□□ -0.57
TCOF1-215ENST00000515516 PRKXP51817 358 aa11.46□□□□□ -0.57
TCOF1-215ENST00000515516 GRB2P62993 217 aaKnown RBP11.46□□□□□ -0.57
TCOF1-215ENST00000515516 ZNF92Q03936 586 aa11.46□□□□□ -0.57
TCOF1-215ENST00000515516 KCNJ8Q15842 424 aa11.46□□□□□ -0.57
TCOF1-215ENST00000515516 SNAI3Q3KNW1 292 aa11.46□□□□□ -0.57
TCOF1-215ENST00000515516 TEX30Q5JUR7 227 aa11.46□□□□□ -0.57
TCOF1-215ENST00000515516 ZNF362Q5T0B9 420 aaPredicted RBP11.46□□□□□ -0.57
TCOF1-215ENST00000515516 SPERTQ8NA61 448 aa11.46□□□□□ -0.57
TCOF1-215ENST00000515516 OR4Q3Q8NH05 313 aa11.46□□□□□ -0.57
TCOF1-215ENST00000515516 Q8TCH9 128 aa11.46□□□□□ -0.57
TCOF1-215ENST00000515516 ZNRF4Q8WWF5 429 aa11.46□□□□□ -0.57
TCOF1-215ENST00000515516 C22orf15Q8WYQ4 148 aa11.46□□□□□ -0.57
TCOF1-215ENST00000515516 KCNJ15Q99712 375 aa11.46□□□□□ -0.57
TCOF1-215ENST00000515516 TMEM246Q9BRR3 403 aa11.46□□□□□ -0.57
TCOF1-215ENST00000515516 THTPAQ9BU02 230 aa11.46□□□□□ -0.57
TCOF1-215ENST00000515516 ADAT1Q9BUB4 502 aaKnown RBP11.46□□□□□ -0.57
TCOF1-215ENST00000515516 CHID1Q9BWS9 393 aa11.46□□□□□ -0.57
TCOF1-215ENST00000515516 C1orf21Q9H246 121 aa11.46□□□□□ -0.57
TCOF1-215ENST00000515516 UFSP2Q9NUQ7 469 aa11.46□□□□□ -0.57
TCOF1-215ENST00000515516 VNN3Q9NY84 501 aa11.46□□□□□ -0.57
TCOF1-215ENST00000515516 XRCC2O43543 280 aa11.45□□□□□ -0.58
TCOF1-215ENST00000515516 FAM20BO75063 409 aa11.45□□□□□ -0.58
TCOF1-215ENST00000515516 FSHBP01225 129 aa11.45□□□□□ -0.58
TCOF1-215ENST00000515516 APOC1P02654 83 aa11.45□□□□□ -0.58
TCOF1-215ENST00000515516 GSTT1P30711 240 aa11.45□□□□□ -0.58
TCOF1-215ENST00000515516 PMELP40967 661 aa11.45□□□□□ -0.58
TCOF1-215ENST00000515516 MAB21L1Q13394 359 aa11.45□□□□□ -0.58
TCOF1-215ENST00000515516 EIF2B1Q14232 305 aaKnown RBP11.45□□□□□ -0.58
TCOF1-215ENST00000515516 ZNF404Q494X3 552 aa11.45□□□□□ -0.58
TCOF1-215ENST00000515516 GLYATL3Q5SZD4 288 aa11.45□□□□□ -0.58
TCOF1-215ENST00000515516 LYPD4Q6UWN0 246 aa11.45□□□□□ -0.58
TCOF1-215ENST00000515516 CD300LDQ6UXZ3 194 aa11.45□□□□□ -0.58
TCOF1-215ENST00000515516 SPATC1Q76KD6 591 aa11.45□□□□□ -0.58
TCOF1-215ENST00000515516 PLPP7Q8NBV4 271 aa11.45□□□□□ -0.58
TCOF1-215ENST00000515516 OR10S1Q8NGN2 331 aa11.45□□□□□ -0.58
TCOF1-215ENST00000515516 OR2AE1Q8NHA4 323 aa11.45□□□□□ -0.58
TCOF1-215ENST00000515516 INTS14Q96SY0 518 aa11.45□□□□□ -0.58
TCOF1-215ENST00000515516 FEVQ99581 238 aa11.45□□□□□ -0.58
TCOF1-215ENST00000515516 NIPSNAP1Q9BPW8 284 aa11.45□□□□□ -0.58
TCOF1-215ENST00000515516 NMNAT2Q9BZQ4 307 aa11.45□□□□□ -0.58
TCOF1-215ENST00000515516 MS4A7Q9GZW8 240 aaPredicted RBP11.45□□□□□ -0.58
TCOF1-215ENST00000515516 TOR3AQ9H497 397 aa11.45□□□□□ -0.58
TCOF1-215ENST00000515516 ZNF556Q9HAH1 456 aa11.45□□□□□ -0.58
TCOF1-215ENST00000515516 CMC2Q9NRP2 79 aa11.45□□□□□ -0.58
TCOF1-215ENST00000515516 TAS2R1Q9NYW7 299 aa11.45□□□□□ -0.58
TCOF1-215ENST00000515516 MRPL15Q9P015 296 aaKnown RBP11.45□□□□□ -0.58
TCOF1-215ENST00000515516 RNF7Q9UBF6 113 aa11.45□□□□□ -0.58
TCOF1-215ENST00000515516 ANKRD30BLA7E2S9 258 aa11.44□□□□□ -0.58
TCOF1-215ENST00000515516 TBX1O43435 398 aa11.44□□□□□ -0.58
TCOF1-215ENST00000515516 E2F6O75461 281 aa11.44□□□□□ -0.58
TCOF1-215ENST00000515516 ANXA2P07355 339 aaKnown RBP11.44□□□□□ -0.58
TCOF1-215ENST00000515516 T-ENOLP0DO92 83 aa11.44□□□□□ -0.58
TCOF1-215ENST00000515516 CLUP10909 449 aa11.44□□□□□ -0.58
TCOF1-215ENST00000515516 SLC2A1P11166 492 aa11.44□□□□□ -0.58
TCOF1-215ENST00000515516 POU1F1P28069 291 aa11.44□□□□□ -0.58
TCOF1-215ENST00000515516 OTX1P32242 354 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms