RNA–Protein interactions for RNA: ENST00000514096.5

LIMCH1-219, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 3,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-219ENST00000514096 A0A1W2PPQ1 181 aa7□□□□□ -1.29
LIMCH1-219ENST00000514096 A0A1W2PR64 198 aa7□□□□□ -1.29
LIMCH1-219ENST00000514096 ASPDHA6ND91 283 aa7□□□□□ -1.29
LIMCH1-219ENST00000514096 AQP7P3A6NL99 342 aa7□□□□□ -1.29
LIMCH1-219ENST00000514096 RGS9O75916 674 aaPredicted RBP7□□□□□ -1.29
LIMCH1-219ENST00000514096 SRD5A2P31213 254 aa7□□□□□ -1.29
LIMCH1-219ENST00000514096 CDH11P55287 796 aa7□□□□□ -1.29
LIMCH1-219ENST00000514096 CDH12P55289 794 aa7□□□□□ -1.29
LIMCH1-219ENST00000514096 VLDLRP98155 873 aa7□□□□□ -1.29
LIMCH1-219ENST00000514096 FUT5Q11128 374 aa7□□□□□ -1.29
LIMCH1-219ENST00000514096 ZNF630Q2M218 657 aaPredicted RBP7□□□□□ -1.29
LIMCH1-219ENST00000514096 ACSF3Q4G176 576 aaPredicted RBP7□□□□□ -1.29
LIMCH1-219ENST00000514096 PRAMEF8Q5VWM4 474 aa7□□□□□ -1.29
LIMCH1-219ENST00000514096 PRAMEF7Q5VXH5 474 aa7□□□□□ -1.29
LIMCH1-219ENST00000514096 OR52W1Q6IF63 320 aa7□□□□□ -1.29
LIMCH1-219ENST00000514096 FAM122BQ7Z309 247 aa7□□□□□ -1.29
LIMCH1-219ENST00000514096 PIK3IP1Q96FE7 263 aa7□□□□□ -1.29
LIMCH1-219ENST00000514096 WDYHV1Q96HA8 205 aa7□□□□□ -1.29
LIMCH1-219ENST00000514096 ALKBH3Q96Q83 286 aaPredicted RBP7□□□□□ -1.29
LIMCH1-219ENST00000514096 TMEM208Q9BTX3 173 aa7□□□□□ -1.29
LIMCH1-219ENST00000514096 TMUB1Q9BVT8 246 aa7□□□□□ -1.29
LIMCH1-219ENST00000514096 FXYD6Q9H0Q3 95 aa7□□□□□ -1.29
LIMCH1-219ENST00000514096 SLC38A1Q9H2H9 487 aa7□□□□□ -1.29
LIMCH1-219ENST00000514096 TMPRSS5Q9H3S3 457 aa7□□□□□ -1.29
LIMCH1-219ENST00000514096 UBTD1Q9HAC8 227 aa7□□□□□ -1.29
LIMCH1-219ENST00000514096 SLC2A9Q9NRM0 540 aa7□□□□□ -1.29
LIMCH1-219ENST00000514096 NPIPB8E9PQR5 432 aa6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 ANXA2P07355 339 aaKnown RBP6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 ANXA3P12429 323 aa6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 PGCP20142 388 aa6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 LSM11P83369 360 aaKnown RBP eCLIP6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 BDH1Q02338 343 aa6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 RASGEF1BQ0VAM2 473 aa6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 SCGB2A2Q13296 93 aa6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 C1DQ13901 141 aaKnown RBP6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 KLHL22Q53GT1 634 aa6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 CDPF1Q6NVV7 123 aa6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 FAM86B1Q8N7N1 296 aa6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 ZFP41Q8N8Y5 198 aa6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 TNFRSF14Q92956 283 aa6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 TAPBPLQ9BX59 468 aa6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 SRXN1Q9BYN0 137 aa6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 KLF2Q9Y5W3 355 aaPredicted RBP6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 C20orf202A1L168 122 aa6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 DLEU1O43261 78 aa6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 CHP2O43745 196 aa6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 SUSD5O60279 629 aa6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 RBMXL2O75526 392 aaKnown RBP6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 PAX6P26367 422 aa6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 CEACAM8P31997 349 aaPredicted RBP6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 MAP2K3P46734 347 aa6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 ZNF136P52737 540 aa6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 RRAS2P62070 204 aaPredicted RBP6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 CBFBQ13951 182 aa6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 OPCMLQ14982 345 aa6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 ZNF836Q6ZNA1 936 aa6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 OR52E4Q8NGH9 312 aa6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 PHF10Q8WUB8 498 aaKnown RBP6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 MCHR1Q99705 422 aa6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 TMED9Q9BVK6 235 aa6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 TMEM231Q9H6L2 316 aa6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 ZDHHC11Q9H8X9 412 aa6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 CRIM1Q9NZV1 1036 aa6.99□□□□□ -1.29
LIMCH1-219ENST00000514096 IGHV3-64DA0A0J9YX35 117 aa6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 FAM221AA4D161 298 aa6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 ALG1L2C9J202 215 aa6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 E9PLN8 166 aa6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 J3KTA2 159 aa6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 ADAM10O14672 748 aa6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 EFNA2O43921 213 aa6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 OR6A2O95222 327 aa6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 GADD45AP24522 165 aa6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 CHRNB4P30926 498 aa6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 TNFSF8P32971 234 aa6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 KIR2DL3P43628 341 aa6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 P2RX1P51575 399 aa6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 FOXG1P55316 489 aaPredicted RBP6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 CTF1Q16619 201 aa6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 DPY19L1Q2PZI1 675 aa6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 ALG10BQ5I7T1 473 aa6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 TEX30Q5JUR7 227 aa6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 LAMTOR1Q6IAA8 161 aa6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 FAHD2BQ6P2I3 314 aaPredicted RBP6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 BAIAP2L2Q6UXY1 529 aa6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 PRSS35Q8N3Z0 413 aa6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 PAPD5Q8NDF8 572 aaKnown RBP6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 OR51A7Q8NH64 312 aa6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 ACOT12Q8WYK0 555 aa6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 NEURL3Q96EH8 262 aa6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 FAHD2AQ96GK7 314 aa6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 RNF2Q99496 336 aa6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 VKORC1Q9BQB6 163 aa6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 ALG8Q9BVK2 526 aa6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 NMNAT1Q9HAN9 279 aaPredicted RBP6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 MED29Q9NX70 200 aa6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 ELF5Q9UKW6 265 aaPredicted RBP6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 HIVEP1P15822 2718 aa6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 TMED7-TICAM2A0A0A6YYA0 188 aa6.98□□□□□ -1.29
LIMCH1-219ENST00000514096 TMEM82A0PJX8 343 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms