RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	ZCCHC24	Q8N2G6	241 aa	Known RBP	12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	STX19	Q8N4C7	294 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	NANOGP1	Q8N7R0	232 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	ZFP41	Q8N8Y5	198 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	OR10AC1	Q8NH08	325 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	KLF14	Q8TD94	323 aa	Predicted RBP	12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	GATAD2B	Q8WXI9	593 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	MRPL24	Q96A35	216 aa	Known RBP	12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	APOBEC3D	Q96AK3	386 aa	Predicted RBP	12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	CMBL	Q96DG6	245 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	MRO	Q9BYG7	248 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	PBOV1	Q9GZY1	135 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107		Q9H521	79 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	ZNF442	Q9H7R0	627 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	INPP5E	Q9NRR6	644 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	FRRS1L	Q9P0K9	344 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	ST6GALNAC2	Q9UJ37	374 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	OR52A1	Q9UKL2	312 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	EXOSC1	Q9Y3B2	195 aa	Known RBP	12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	PCDHGB1	Q9Y5G3	927 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	CENPE	Q02224	2701 aa		12.46	□□□□□ -0.41
MATR3-238	ENST00000512107	ARFGEF3	Q5TH69	2177 aa		12.46	□□□□□ -0.42
MATR3-238	ENST00000512107	DSCAM	O60469	2012 aa		12.45	□□□□□ -0.42
MATR3-238	ENST00000512107	PDZD2	O15018	2839 aa		12.45	□□□□□ -0.42
MATR3-238	ENST00000512107	TBX1	O43435	398 aa		12.45	□□□□□ -0.42
MATR3-238	ENST00000512107	GOSR1	O95249	250 aa		12.45	□□□□□ -0.42
MATR3-238	ENST00000512107	KRT8	P05787	483 aa		12.45	□□□□□ -0.42
MATR3-238	ENST00000512107	DCTD	P32321	178 aa		12.45	□□□□□ -0.42
MATR3-238	ENST00000512107	TTK	P33981	857 aa		12.45	□□□□□ -0.42
MATR3-238	ENST00000512107	RAD52	P43351	418 aa		12.45	□□□□□ -0.42
MATR3-238	ENST00000512107	MAGEB1	P43366	347 aa		12.45	□□□□□ -0.42
MATR3-238	ENST00000512107	MMP16	P51512	607 aa		12.45	□□□□□ -0.42
MATR3-238	ENST00000512107	ODF4	Q2M2E3	257 aa		12.45	□□□□□ -0.42
MATR3-238	ENST00000512107	RGS7BP	Q6MZT1	257 aa	Predicted RBP	12.45	□□□□□ -0.42
MATR3-238	ENST00000512107		Q6ZR03	302 aa		12.45	□□□□□ -0.42
MATR3-238	ENST00000512107	ZNF611	Q8N823	705 aa		12.45	□□□□□ -0.42
MATR3-238	ENST00000512107	FBXW5	Q969U6	566 aa		12.45	□□□□□ -0.42
MATR3-238	ENST00000512107	PGAM5	Q96HS1	289 aa		12.45	□□□□□ -0.42
MATR3-238	ENST00000512107	TRAF4	Q9BUZ4	470 aa	Predicted RBP	12.45	□□□□□ -0.42
MATR3-238	ENST00000512107	CDCA4	Q9BXL8	241 aa		12.45	□□□□□ -0.42
MATR3-238	ENST00000512107	BCL2L14	Q9BZR8	327 aa		12.45	□□□□□ -0.42
MATR3-238	ENST00000512107	EIF3K	Q9UBQ5	218 aa	Known RBP	12.45	□□□□□ -0.42
MATR3-238	ENST00000512107	AKAP6	Q13023	2319 aa		12.44	□□□□□ -0.42
MATR3-238	ENST00000512107	IGLV3-9	A0A075B6K5	115 aa		12.44	□□□□□ -0.42
MATR3-238	ENST00000512107	hCG_38984	A0A1B0GV85	526 aa		12.44	□□□□□ -0.42
MATR3-238	ENST00000512107	P2RY10	O00398	339 aa		12.44	□□□□□ -0.42
MATR3-238	ENST00000512107	ACKR3	P25106	362 aa		12.44	□□□□□ -0.42
MATR3-238	ENST00000512107	APOBEC3A	P31941	199 aa	Predicted RBP	12.44	□□□□□ -0.42
MATR3-238	ENST00000512107	ALDH3B1	P43353	468 aa		12.44	□□□□□ -0.42
MATR3-238	ENST00000512107	CSNK2B	P67870	215 aa		12.44	□□□□□ -0.42
MATR3-238	ENST00000512107	FAM3A	P98173	230 aa		12.44	□□□□□ -0.42
MATR3-238	ENST00000512107	RNLS	Q5VYX0	342 aa		12.44	□□□□□ -0.42
MATR3-238	ENST00000512107	MBNL2	Q5VZF2	373 aa	Known RBP	12.44	□□□□□ -0.42
MATR3-238	ENST00000512107	OR2T2	Q6IF00	324 aa		12.44	□□□□□ -0.42
MATR3-238	ENST00000512107	FDX2	Q6P4F2	183 aa		12.44	□□□□□ -0.42
MATR3-238	ENST00000512107	FBXW12	Q6X9E4	464 aa		12.44	□□□□□ -0.42
MATR3-238	ENST00000512107	DTX2	Q86UW9	622 aa		12.44	□□□□□ -0.42
MATR3-238	ENST00000512107	KLB	Q86Z14	1044 aa		12.44	□□□□□ -0.42
MATR3-238	ENST00000512107	OR5AS1	Q8N127	324 aa		12.44	□□□□□ -0.42
MATR3-238	ENST00000512107	SYS1	Q8N2H4	156 aa		12.44	□□□□□ -0.42
MATR3-238	ENST00000512107	OR2G2	Q8NGZ5	317 aa		12.44	□□□□□ -0.42
MATR3-238	ENST00000512107	RPS4Y2	Q8TD47	263 aa		12.44	□□□□□ -0.42
MATR3-238	ENST00000512107	RGP1	Q92546	391 aa	Predicted RBP	12.44	□□□□□ -0.42
MATR3-238	ENST00000512107	SPSB4	Q96A44	273 aa		12.44	□□□□□ -0.42
MATR3-238	ENST00000512107	HAVCR1	Q96D42	359 aa		12.44	□□□□□ -0.42
MATR3-238	ENST00000512107	REPIN1	Q9BWE0	567 aa	Known RBP	12.44	□□□□□ -0.42
MATR3-238	ENST00000512107	SCN3B	Q9NY72	215 aa		12.44	□□□□□ -0.42
MATR3-238	ENST00000512107	NUFIP1	Q9UHK0	495 aa	Known RBP	12.44	□□□□□ -0.42
MATR3-238	ENST00000512107	DUSP13	Q9UII6	198 aa		12.44	□□□□□ -0.42
MATR3-238	ENST00000512107	CAB39	Q9Y376	341 aa	Predicted RBP	12.44	□□□□□ -0.42
MATR3-238	ENST00000512107	TPRKB	Q9Y3C4	175 aa		12.44	□□□□□ -0.42
MATR3-238	ENST00000512107	CMAHP	Q9Y471	501 aa		12.44	□□□□□ -0.42
MATR3-238	ENST00000512107	TACC2	O95359	2948 aa		12.44	□□□□□ -0.42
MATR3-238	ENST00000512107	IRGM	A1A4Y4	181 aa		12.43	□□□□□ -0.42
MATR3-238	ENST00000512107	OR4C45	A6NMZ5	311 aa		12.43	□□□□□ -0.42
MATR3-238	ENST00000512107	LOC110117498-PIK3R3	F6TDL0	507 aa		12.43	□□□□□ -0.42
MATR3-238	ENST00000512107	RGS10	O43665	173 aa		12.43	□□□□□ -0.42
MATR3-238	ENST00000512107	NDUFS7	O75251	213 aa		12.43	□□□□□ -0.42
MATR3-238	ENST00000512107	CD53	P19397	219 aa		12.43	□□□□□ -0.42
MATR3-238	ENST00000512107	PCMT1	P22061	227 aa		12.43	□□□□□ -0.42
MATR3-238	ENST00000512107	SERPINF1	P36955	418 aa		12.43	□□□□□ -0.42
MATR3-238	ENST00000512107	RGS6	P49758	472 aa		12.43	□□□□□ -0.42
MATR3-238	ENST00000512107	EFNB3	Q15768	340 aa		12.43	□□□□□ -0.42
MATR3-238	ENST00000512107	GFOD2	Q3B7J2	385 aa		12.43	□□□□□ -0.42
MATR3-238	ENST00000512107	ELMOD2	Q8IZ81	293 aa		12.43	□□□□□ -0.42
MATR3-238	ENST00000512107	MUC15	Q8N387	334 aa		12.43	□□□□□ -0.42
MATR3-238	ENST00000512107	KLHL36	Q8N4N3	616 aa		12.43	□□□□□ -0.42
MATR3-238	ENST00000512107	OR52N1	Q8NH53	320 aa		12.43	□□□□□ -0.42
MATR3-238	ENST00000512107	SYNPR	Q8TBG9	265 aa		12.43	□□□□□ -0.42
MATR3-238	ENST00000512107	OR51E1	Q8TCB6	317 aa		12.43	□□□□□ -0.42
MATR3-238	ENST00000512107	MYDGF	Q969H8	173 aa		12.43	□□□□□ -0.42
MATR3-238	ENST00000512107	REEP6	Q96HR9	211 aa		12.43	□□□□□ -0.42
MATR3-238	ENST00000512107	FGF23	Q9GZV9	251 aa	Predicted RBP	12.43	□□□□□ -0.42
MATR3-238	ENST00000512107	PLK3	Q9H4B4	646 aa		12.43	□□□□□ -0.42
MATR3-238	ENST00000512107	NIPAL2	Q9H841	368 aa		12.43	□□□□□ -0.42
MATR3-238	ENST00000512107	PURG	Q9UJV8	347 aa	Known RBP	12.43	□□□□□ -0.42
MATR3-238	ENST00000512107	GTF2A1L	Q9UNN4	478 aa		12.43	□□□□□ -0.42
MATR3-238	ENST00000512107	LAMP3	Q9UQV4	416 aa		12.43	□□□□□ -0.42
MATR3-238	ENST00000512107	PLEKHA6	Q9Y2H5	1048 aa		12.43	□□□□□ -0.42
MATR3-238	ENST00000512107	ZSCAN5B	A6NJL1	495 aa		12.42	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms