RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 SLC25A19Q9HC21 320 aa13.9□□□□□ -0.18
DDX41-213ENST00000512027 GCM1Q9NP62 436 aa13.9□□□□□ -0.18
DDX41-213ENST00000512027 PAPOLBQ9NRJ5 636 aaKnown RBP13.9□□□□□ -0.18
DDX41-213ENST00000512027 PLPP2O43688 288 aa13.89□□□□□ -0.19
DDX41-213ENST00000512027 ATP5HO75947 161 aa13.89□□□□□ -0.19
DDX41-213ENST00000512027 CYB5R3P00387 301 aaPredicted RBP13.89□□□□□ -0.19
DDX41-213ENST00000512027 IFNA2P01563 188 aa13.89□□□□□ -0.19
DDX41-213ENST00000512027 CX3CR1P49238 355 aa13.89□□□□□ -0.19
DDX41-213ENST00000512027 CRISP1P54107 249 aa13.89□□□□□ -0.19
DDX41-213ENST00000512027 HOXA4Q00056 320 aaPredicted RBP13.89□□□□□ -0.19
DDX41-213ENST00000512027 ZMYND11Q15326 602 aa13.89□□□□□ -0.19
DDX41-213ENST00000512027 ATP6AP1Q15904 470 aa13.89□□□□□ -0.19
DDX41-213ENST00000512027 PRAMEF6Q5VXH4 476 aa13.89□□□□□ -0.19
DDX41-213ENST00000512027 DRAM2Q6UX65 266 aa13.89□□□□□ -0.19
DDX41-213ENST00000512027 MOGAT3Q86VF5 341 aa13.89□□□□□ -0.19
DDX41-213ENST00000512027 OR5K1Q8NHB7 308 aa13.89□□□□□ -0.19
DDX41-213ENST00000512027 LRTOMTQ8WZ04 291 aa13.89□□□□□ -0.19
DDX41-213ENST00000512027 RAB39BQ96DA2 213 aa13.89□□□□□ -0.19
DDX41-213ENST00000512027 TMEM100Q9NV29 134 aa13.89□□□□□ -0.19
DDX41-213ENST00000512027 TVP23BQ9NYZ1 205 aa13.89□□□□□ -0.19
DDX41-213ENST00000512027 KLHDC2Q9Y2U9 406 aa13.89□□□□□ -0.19
DDX41-213ENST00000512027 WNK2Q9Y3S1 2297 aa13.89□□□□□ -0.19
DDX41-213ENST00000512027 CD300LBA8K4G0 201 aa13.88□□□□□ -0.19
DDX41-213ENST00000512027 PHF1O43189 567 aaPredicted RBP13.88□□□□□ -0.19
DDX41-213ENST00000512027 TBX1O43435 398 aa13.88□□□□□ -0.19
DDX41-213ENST00000512027 HMGN1P05114 100 aa13.88□□□□□ -0.19
DDX41-213ENST00000512027 SLC2A5P22732 501 aa13.88□□□□□ -0.19
DDX41-213ENST00000512027 CA6P23280 308 aa13.88□□□□□ -0.19
DDX41-213ENST00000512027 HSD11B1P28845 292 aa13.88□□□□□ -0.19
DDX41-213ENST00000512027 EPHA2P29317 976 aa13.88□□□□□ -0.19
DDX41-213ENST00000512027 SRP14P37108 136 aaKnown RBP13.88□□□□□ -0.19
DDX41-213ENST00000512027 PMELP40967 661 aa13.88□□□□□ -0.19
DDX41-213ENST00000512027 BLVRAP53004 296 aa13.88□□□□□ -0.19
DDX41-213ENST00000512027 HCCSP53701 268 aa13.88□□□□□ -0.19
DDX41-213ENST00000512027 SEC61A1P61619 476 aaKnown RBP13.88□□□□□ -0.19
DDX41-213ENST00000512027 RPS7P62081 194 aaKnown RBP13.88□□□□□ -0.19
DDX41-213ENST00000512027 BTG1P62324 171 aa13.88□□□□□ -0.19
DDX41-213ENST00000512027 LCN2P80188 198 aa13.88□□□□□ -0.19
DDX41-213ENST00000512027 MAB21L1Q13394 359 aa13.88□□□□□ -0.19
DDX41-213ENST00000512027 FAM201AQ5SY85 155 aa13.88□□□□□ -0.19
DDX41-213ENST00000512027 FAHD2BQ6P2I3 314 aaPredicted RBP13.88□□□□□ -0.19
DDX41-213ENST00000512027 CXXC5Q7LFL8 322 aaKnown RBP13.88□□□□□ -0.19
DDX41-213ENST00000512027 PEG10Q86TG7 708 aaKnown RBP13.88□□□□□ -0.19
DDX41-213ENST00000512027 RNF133Q8WVZ7 376 aa13.88□□□□□ -0.19
DDX41-213ENST00000512027 SPRYD4Q8WW59 207 aaPredicted RBP13.88□□□□□ -0.19
DDX41-213ENST00000512027 NRBF2Q96F24 287 aa13.88□□□□□ -0.19
DDX41-213ENST00000512027 FAHD2AQ96GK7 314 aa13.88□□□□□ -0.19
DDX41-213ENST00000512027 PLEKHA8Q96JA3 519 aa13.88□□□□□ -0.19
DDX41-213ENST00000512027 BRD7Q9NPI1 651 aa13.88□□□□□ -0.19
DDX41-213ENST00000512027 G6PC2Q9NQR9 355 aa13.88□□□□□ -0.19
DDX41-213ENST00000512027 AP4S1Q9Y587 144 aa13.88□□□□□ -0.19
DDX41-213ENST00000512027 A0A1B0GWJ7 208 aa13.87□□□□□ -0.19
DDX41-213ENST00000512027 GGT3PA6NGU5 568 aa13.87□□□□□ -0.19
DDX41-213ENST00000512027 TMEM178BH3BS89 294 aa13.87□□□□□ -0.19
DDX41-213ENST00000512027 AVPP01185 164 aa13.87□□□□□ -0.19
DDX41-213ENST00000512027 ANXA2P07355 339 aaKnown RBP13.87□□□□□ -0.19
DDX41-213ENST00000512027 MRPL3P09001 348 aaKnown RBP13.87□□□□□ -0.19
DDX41-213ENST00000512027 SRP9P49458 86 aaKnown RBP13.87□□□□□ -0.19
DDX41-213ENST00000512027 APOFQ13790 326 aa13.87□□□□□ -0.19
DDX41-213ENST00000512027 PTGES3Q15185 160 aaKnown RBP13.87□□□□□ -0.19
DDX41-213ENST00000512027 SNAPC1Q16533 368 aa13.87□□□□□ -0.19
DDX41-213ENST00000512027 GFOD2Q3B7J2 385 aa13.87□□□□□ -0.19
DDX41-213ENST00000512027 C1orf229Q6ZS94 237 aaPredicted RBP13.87□□□□□ -0.19
DDX41-213ENST00000512027 FAM57BQ71RH2 274 aa13.87□□□□□ -0.19
DDX41-213ENST00000512027 BCDIN3DQ7Z5W3 292 aaKnown RBP13.87□□□□□ -0.19
DDX41-213ENST00000512027 OR56B2PQ8NGI1 322 aa13.87□□□□□ -0.19
DDX41-213ENST00000512027 REPIN1Q9BWE0 567 aaKnown RBP13.87□□□□□ -0.19
DDX41-213ENST00000512027 SEMA6AQ9H2E6 1030 aa13.87□□□□□ -0.19
DDX41-213ENST00000512027 MMADHCQ9H3L0 296 aaPredicted RBP13.87□□□□□ -0.19
DDX41-213ENST00000512027 KRT84Q9NSB2 600 aa13.87□□□□□ -0.19
DDX41-213ENST00000512027 UFSP2Q9NUQ7 469 aa13.87□□□□□ -0.19
DDX41-213ENST00000512027 ZNF319Q9P2F9 582 aa13.87□□□□□ -0.19
DDX41-213ENST00000512027 TRAV20A0A0B4J274 112 aa13.86□□□□□ -0.19
DDX41-213ENST00000512027 CCDC182A6NF36 153 aa13.86□□□□□ -0.19
DDX41-213ENST00000512027 PRODHO43272 600 aa13.86□□□□□ -0.19
DDX41-213ENST00000512027 PRKYO43930 277 aa13.86□□□□□ -0.19
DDX41-213ENST00000512027 FASP25445 335 aa13.86□□□□□ -0.19
DDX41-213ENST00000512027 ZFP36P26651 326 aaKnown RBP13.86□□□□□ -0.19
DDX41-213ENST00000512027 OPRL1P41146 370 aa13.86□□□□□ -0.19
DDX41-213ENST00000512027 ZNF121P58317 390 aaPredicted RBP13.86□□□□□ -0.19
DDX41-213ENST00000512027 GRB2P62993 217 aaKnown RBP13.86□□□□□ -0.19
DDX41-213ENST00000512027 OR8G1Q15617 311 aa13.86□□□□□ -0.19
DDX41-213ENST00000512027 MPPED2Q15777 294 aa13.86□□□□□ -0.19
DDX41-213ENST00000512027 ASRGL1Q7L266 308 aa13.86□□□□□ -0.19
DDX41-213ENST00000512027 SHFQ7M4L6 423 aa13.86□□□□□ -0.19
DDX41-213ENST00000512027 PARP8Q8N3A8 854 aa13.86□□□□□ -0.19
DDX41-213ENST00000512027 C19orf18Q8NEA5 215 aa13.86□□□□□ -0.19
DDX41-213ENST00000512027 OTOSQ8NHW6 89 aa13.86□□□□□ -0.19
DDX41-213ENST00000512027 THEM6Q8WUY1 208 aa13.86□□□□□ -0.19
DDX41-213ENST00000512027 DUS3LQ96G46 650 aaKnown RBP13.86□□□□□ -0.19
DDX41-213ENST00000512027 ADAT1Q9BUB4 502 aaKnown RBP13.86□□□□□ -0.19
DDX41-213ENST00000512027 TTTY10Q9BZA0 68 aa13.86□□□□□ -0.19
DDX41-213ENST00000512027 PCDHB10Q9UN67 800 aa13.86□□□□□ -0.19
DDX41-213ENST00000512027 LOC105371242A0A075B767 164 aa13.85□□□□□ -0.19
DDX41-213ENST00000512027 RNF212BA8MTL3 300 aa13.85□□□□□ -0.19
DDX41-213ENST00000512027 G3V2T6 193 aa13.85□□□□□ -0.19
DDX41-213ENST00000512027 CIB2O75838 187 aa13.85□□□□□ -0.19
DDX41-213ENST00000512027 PNPP00491 289 aa13.85□□□□□ -0.19
DDX41-213ENST00000512027 LYNP07948 512 aa13.85□□□□□ -0.19
DDX41-213ENST00000512027 H2BFMP0C1H6 154 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms