RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 MTX3Q5HYI7 312 aa5.54□□□□□ -1.52
COPS4-209ENST00000511653 OTPQ5XKR4 325 aa5.54□□□□□ -1.52
COPS4-209ENST00000511653 C16orf89Q6UX73 402 aa5.54□□□□□ -1.52
COPS4-209ENST00000511653 SPICQ8N5J4 248 aa5.54□□□□□ -1.52
COPS4-209ENST00000511653 ITLN1Q8WWA0 313 aa5.54□□□□□ -1.52
COPS4-209ENST00000511653 SLC25A28Q96A46 364 aa5.54□□□□□ -1.52
COPS4-209ENST00000511653 TLCD1Q96CP7 247 aa5.54□□□□□ -1.52
COPS4-209ENST00000511653 EVA1AQ9H8M9 152 aa5.54□□□□□ -1.52
COPS4-209ENST00000511653 CYSLTR2Q9NS75 346 aa5.54□□□□□ -1.52
COPS4-209ENST00000511653 KIF17Q9P2E2 1029 aa5.54□□□□□ -1.52
COPS4-209ENST00000511653 EIF3KQ9UBQ5 218 aaKnown RBP5.54□□□□□ -1.52
COPS4-209ENST00000511653 LINC00473A8K010 186 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 H3BSA7 217 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 H7C1C5 153 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 CLDN34H7C241 214 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 MPPED1O15442 326 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 TMEM225BP0DP42 221 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 PCGF2P35227 344 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 SLC18A1P54219 525 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 LCN6P62502 163 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 PAX8Q06710 450 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 TAF11Q15544 211 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 TMEM155Q4W5P6 130 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 FAM27BQ5VT28 67 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 FOXL2NBQ6ZUU3 175 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 Q6ZWC4 215 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 IGFN1Q86VF2 1251 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 LRRC28Q86X40 367 aaPredicted RBP5.53□□□□□ -1.52
COPS4-209ENST00000511653 BEND2Q8NDZ0 799 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 OR2Z1Q8NG97 314 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 TRIM63Q969Q1 353 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 TMIGD2Q96BF3 282 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 SGTBQ96EQ0 304 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 C4orf45Q96LM5 186 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 C7orf26Q96N11 449 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 CGREF1Q99674 301 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 GPA33Q99795 319 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 DPCDQ9BVM2 203 aaPredicted RBP5.53□□□□□ -1.52
COPS4-209ENST00000511653 SLITRK2Q9H156 845 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 KCNN2Q9H2S1 579 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 TXNIPQ9H3M7 391 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 KAT8Q9H7Z6 458 aaKnown RBP5.53□□□□□ -1.52
COPS4-209ENST00000511653 ZNF446Q9NWS9 450 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 NKIRAS1Q9NYS0 192 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 PDP1Q9P0J1 537 aaPredicted RBP5.53□□□□□ -1.52
COPS4-209ENST00000511653 RAB21Q9UL25 225 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 PLXNB1O43157 2135 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 A0A0G2JK05 382 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 IGHV3-64DA0A0J9YX35 117 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 FAM90A20PA6NIJ5 464 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 NPIPB13A6NJU9 1138 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 NPIPB4C9JG80 1138 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 MGST3O14880 152 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 MBPP02686 304 aaPredicted RBP5.53□□□□□ -1.52
COPS4-209ENST00000511653 CST2P09228 141 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 MDH2P40926 338 aaKnown RBP5.53□□□□□ -1.52
COPS4-209ENST00000511653 GZMMP51124 257 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 TAS2R41P59536 307 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 KRTAP10-3P60369 221 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 HOXA4Q00056 320 aaPredicted RBP5.53□□□□□ -1.52
COPS4-209ENST00000511653 DEFB112Q30KQ8 113 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 ESCO2Q56NI9 601 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 ALG10Q5BKT4 473 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 CCDC144NLQ6NUI1 221 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 BRD3OSQ6XYD6 125 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 C9orf139Q6ZV77 190 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 HDDC2Q7Z4H3 204 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 PATL1Q86TB9 770 aaKnown RBP5.53□□□□□ -1.52
COPS4-209ENST00000511653 MICU2Q8IYU8 434 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 DPP10Q8N608 796 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 KIR3DL3Q8N743 410 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 OR10AD1Q8NGE0 317 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 OR52E2Q8NGJ4 325 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 OR10A6Q8NH74 314 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 ZNF420Q8TAQ5 688 aaPredicted RBP5.53□□□□□ -1.52
COPS4-209ENST00000511653 TMEM239Q8WW34 195 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 LINC00476Q8WZB0 136 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 SLC7A6Q92536 515 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 UPRTQ96BW1 309 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 THOC1Q96FV9 657 aaKnown RBP5.53□□□□□ -1.52
COPS4-209ENST00000511653 OR2V2Q96R30 315 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 CCDC28BQ9BUN5 200 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 MARCH7Q9H992 704 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 TNFRSF19Q9NS68 423 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 NKX1-2Q9UD57 310 aaPredicted RBP5.53□□□□□ -1.52
COPS4-209ENST00000511653 OR5V1Q9UGF6 321 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 PPP1R3CQ9UQK1 317 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 SH3GLB1Q9Y371 365 aa5.53□□□□□ -1.52
COPS4-209ENST00000511653 DNAH9Q9NYC9 4486 aa5.52□□□□□ -1.53
COPS4-209ENST00000511653 TRAV27A0A087WT01 109 aa5.52□□□□□ -1.53
COPS4-209ENST00000511653 IGHV2-70DA0A0C4DH43 119 aa5.52□□□□□ -1.53
COPS4-209ENST00000511653 HMGB1P1B2RPK0 211 aaPredicted RBP5.52□□□□□ -1.53
COPS4-209ENST00000511653 H0YIZ8 118 aa5.52□□□□□ -1.53
COPS4-209ENST00000511653 TMEM178BH3BS89 294 aa5.52□□□□□ -1.53
COPS4-209ENST00000511653 DOK2O60496 412 aa5.52□□□□□ -1.53
COPS4-209ENST00000511653 TGDSO95455 350 aa5.52□□□□□ -1.53
COPS4-209ENST00000511653 CYB5R3P00387 301 aaPredicted RBP5.52□□□□□ -1.53
COPS4-209ENST00000511653 WNT2P09544 360 aa5.52□□□□□ -1.53
COPS4-209ENST00000511653 RPS2P15880 293 aaKnown RBP5.52□□□□□ -1.53
COPS4-209ENST00000511653 SELEP16581 610 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms