RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 GTF3AQ92664 365 aaKnown RBP6.1□□□□□ -1.43
PDLIM5-215ENST00000511586 RDH5Q92781 318 aa6.1□□□□□ -1.43
PDLIM5-215ENST00000511586 COX4I2Q96KJ9 171 aa6.1□□□□□ -1.43
PDLIM5-215ENST00000511586 ZNF582Q96NG8 517 aaPredicted RBP6.1□□□□□ -1.43
PDLIM5-215ENST00000511586 DIRC2Q96SL1 478 aa6.1□□□□□ -1.43
PDLIM5-215ENST00000511586 AMELYQ99218 206 aa6.1□□□□□ -1.43
PDLIM5-215ENST00000511586 MNTQ99583 582 aa6.1□□□□□ -1.43
PDLIM5-215ENST00000511586 PIMREGQ9BSJ6 248 aa6.1□□□□□ -1.43
PDLIM5-215ENST00000511586 YTHDF1Q9BYJ9 559 aaKnown RBP6.1□□□□□ -1.43
PDLIM5-215ENST00000511586 FAM192AQ9GZU8 254 aa6.1□□□□□ -1.43
PDLIM5-215ENST00000511586 DECR2Q9NUI1 292 aa6.1□□□□□ -1.43
PDLIM5-215ENST00000511586 HAO2Q9NYQ3 351 aa6.1□□□□□ -1.43
PDLIM5-215ENST00000511586 WARS2Q9UGM6 360 aaKnown RBP6.1□□□□□ -1.43
PDLIM5-215ENST00000511586 ZDHHC8Q9ULC8 765 aa6.1□□□□□ -1.43
PDLIM5-215ENST00000511586 HSPE1-MOB4S4R3N1 261 aa6.1□□□□□ -1.43
PDLIM5-215ENST00000511586 AKAP9Q99996 3911 aa6.1□□□□□ -1.43
PDLIM5-215ENST00000511586 A6NHS1 94 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 ZSCAN5BA6NJL1 495 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 IQCF6A8MYZ5 107 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 E9PQ18 207 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 SMAD7O15105 426 aaKnown RBP6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 XRCC2O43543 280 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 ZNF254O75437 659 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 IGHV1-46P01743 117 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 ANXA2P07355 339 aaKnown RBP6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 CD55P08174 381 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 ADH4P08319 380 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 MRPL3P09001 348 aaKnown RBP6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 TNFSF4P23510 183 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 GIFP27352 417 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 NR4A2P43354 598 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 RPL5P46777 297 aaKnown RBP6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 CX3CR1P49238 355 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 HCCSP53701 268 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 CDH15P55291 814 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 ZNF121P58317 390 aaPredicted RBP6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 GABARAPL2P60520 117 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 SNRPGP62308 76 aaKnown RBP6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 TNFAIP6P98066 277 aaPredicted RBP6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 ZNF92Q03936 586 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 POU4F2Q12837 409 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 CDK5R2Q13319 367 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 TMED1Q13445 227 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 GK2Q14410 553 aaPredicted RBP6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 TSTQ16762 297 aaKnown RBP6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 SNAI3Q3KNW1 292 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 SLC25A30Q5SVS4 291 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 MEDAGQ5VYS4 303 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 OR2T2Q6IF00 324 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 PGAP1Q75T13 922 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 MRPL21Q7Z2W9 205 aaKnown RBP6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 KRT77Q7Z794 578 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 BIVMQ86UB2 503 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 OR5AS1Q8N127 324 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 OR8G5Q8NG78 346 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 OR2Z1Q8NG97 314 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 OR52H1Q8NGJ2 320 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 RFKQ969G6 155 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 UBE2FQ969M7 185 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 CNN2Q99439 309 aaKnown RBP6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 MROQ9BYG7 248 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 EGLN1Q9GZT9 426 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 OPA3Q9H6K4 179 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 NIPAL2Q9H841 368 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 CHODLQ9H9P2 273 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 SAP30LQ9HAJ7 183 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 MSL2Q9HCI7 577 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 TMEM100Q9NV29 134 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 SCN3BQ9NY72 215 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 KLHDC2Q9Y2U9 406 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 N6AMT1Q9Y5N5 214 aa6.09□□□□□ -1.43
PDLIM5-215ENST00000511586 IGHV1-69-2A0A0G2JMI3 117 aa6.08□□□□□ -1.44
PDLIM5-215ENST00000511586 SMIM31A0A1B0GVY4 71 aa6.08□□□□□ -1.44
PDLIM5-215ENST00000511586 CCDC160A6NGH7 325 aa6.08□□□□□ -1.44
PDLIM5-215ENST00000511586 SNTNA6NMZ2 147 aa6.08□□□□□ -1.44
PDLIM5-215ENST00000511586 VWC2LB2RUY7 222 aa6.08□□□□□ -1.44
PDLIM5-215ENST00000511586 ZNF670-ZNF695F2Z2N8 137 aa6.08□□□□□ -1.44
PDLIM5-215ENST00000511586 LYNX1G3V0Z9 82 aa6.08□□□□□ -1.44
PDLIM5-215ENST00000511586 SLC1A7O00341 560 aa6.08□□□□□ -1.44
PDLIM5-215ENST00000511586 PHYHO14832 338 aa6.08□□□□□ -1.44
PDLIM5-215ENST00000511586 TBX1O43435 398 aa6.08□□□□□ -1.44
PDLIM5-215ENST00000511586 MPZL2O60487 215 aa6.08□□□□□ -1.44
PDLIM5-215ENST00000511586 FAM20BO75063 409 aa6.08□□□□□ -1.44
PDLIM5-215ENST00000511586 NCR1O76036 304 aa6.08□□□□□ -1.44
PDLIM5-215ENST00000511586 SBK2P0C263 348 aa6.08□□□□□ -1.44
PDLIM5-215ENST00000511586 OR2T7P0C7T2 308 aa6.08□□□□□ -1.44
PDLIM5-215ENST00000511586 LYNX1P0DP58 116 aa6.08□□□□□ -1.44
PDLIM5-215ENST00000511586 SLC2A1P11166 492 aa6.08□□□□□ -1.44
PDLIM5-215ENST00000511586 ACHEP22303 614 aa6.08□□□□□ -1.44
PDLIM5-215ENST00000511586 USF1P22415 310 aaPredicted RBP6.08□□□□□ -1.44
PDLIM5-215ENST00000511586 CFL1P23528 166 aaKnown RBP6.08□□□□□ -1.44
PDLIM5-215ENST00000511586 COL8A2P25067 703 aa6.08□□□□□ -1.44
PDLIM5-215ENST00000511586 DCTDP32321 178 aa6.08□□□□□ -1.44
PDLIM5-215ENST00000511586 ATP6V1E1P36543 226 aa6.08□□□□□ -1.44
PDLIM5-215ENST00000511586 CRYBB2P43320 205 aa6.08□□□□□ -1.44
PDLIM5-215ENST00000511586 TMEM33P57088 247 aa6.08□□□□□ -1.44
PDLIM5-215ENST00000511586 ROM1Q03395 351 aa6.08□□□□□ -1.44
PDLIM5-215ENST00000511586 EGR3Q06889 387 aa6.08□□□□□ -1.44
PDLIM5-215ENST00000511586 LOXL1Q08397 574 aaPredicted RBP6.08□□□□□ -1.44
PDLIM5-215ENST00000511586 RIN1Q13671 783 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms