RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 HRASLS5Q96KN8 279 aa9.94□□□□□ -0.82
HMGXB3-203ENST00000510472 IL4I1Q96RQ9 567 aa9.94□□□□□ -0.82
HMGXB3-203ENST00000510472 SLC29A1Q99808 456 aa9.94□□□□□ -0.82
HMGXB3-203ENST00000510472 EGLN1Q9GZT9 426 aa9.94□□□□□ -0.82
HMGXB3-203ENST00000510472 PPIHO43447 177 aaKnown RBP9.93□□□□□ -0.82
HMGXB3-203ENST00000510472 APOC1P02654 83 aa9.93□□□□□ -0.82
HMGXB3-203ENST00000510472 SLC6A9P48067 706 aa9.93□□□□□ -0.82
HMGXB3-203ENST00000510472 CX3CR1P49238 355 aa9.93□□□□□ -0.82
HMGXB3-203ENST00000510472 PRSS12P56730 875 aa9.93□□□□□ -0.82
HMGXB3-203ENST00000510472 ZNF121P58317 390 aaPredicted RBP9.93□□□□□ -0.82
HMGXB3-203ENST00000510472 RPS7P62081 194 aaKnown RBP9.93□□□□□ -0.82
HMGXB3-203ENST00000510472 HNRNPA0Q13151 305 aaKnown RBP9.93□□□□□ -0.82
HMGXB3-203ENST00000510472 TAF13Q15543 124 aa9.93□□□□□ -0.82
HMGXB3-203ENST00000510472 HFEQ30201 348 aa9.93□□□□□ -0.82
HMGXB3-203ENST00000510472 SLC25A30Q5SVS4 291 aa9.93□□□□□ -0.82
HMGXB3-203ENST00000510472 DEGS2Q6QHC5 323 aa9.93□□□□□ -0.82
HMGXB3-203ENST00000510472 CBR4Q8N4T8 237 aa9.93□□□□□ -0.82
HMGXB3-203ENST00000510472 ZNF283Q8N7M2 679 aa9.93□□□□□ -0.82
HMGXB3-203ENST00000510472 OR8J1Q8NGP2 316 aa9.93□□□□□ -0.82
HMGXB3-203ENST00000510472 OR2AE1Q8NHA4 323 aa9.93□□□□□ -0.82
HMGXB3-203ENST00000510472 CLDND2Q8NHS1 167 aa9.93□□□□□ -0.82
HMGXB3-203ENST00000510472 THEM6Q8WUY1 208 aa9.93□□□□□ -0.82
HMGXB3-203ENST00000510472 CCL17Q92583 94 aa9.93□□□□□ -0.82
HMGXB3-203ENST00000510472 UBE2FQ969M7 185 aa9.93□□□□□ -0.82
HMGXB3-203ENST00000510472 ADGRL4Q9HBW9 690 aa9.93□□□□□ -0.82
HMGXB3-203ENST00000510472 TMEM100Q9NV29 134 aa9.93□□□□□ -0.82
HMGXB3-203ENST00000510472 TMEM160Q9NX00 188 aa9.93□□□□□ -0.82
HMGXB3-203ENST00000510472 DCAF16Q9NXF7 216 aa9.93□□□□□ -0.82
HMGXB3-203ENST00000510472 COPS3Q9UNS2 423 aa9.93□□□□□ -0.82
HMGXB3-203ENST00000510472 WIPI2Q9Y4P8 454 aa9.93□□□□□ -0.82
HMGXB3-203ENST00000510472 CHD3Q12873 2000 aaKnown RBP9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 SLC22A31A6NKX4 558 aa9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 A8MV72 311 aaPredicted RBP9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 TPD52L2O43399 206 aaKnown RBP9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 XRCC2O43543 280 aa9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 CRLF1O75462 422 aa9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 PTBP3O95758 552 aaKnown RBP9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 H2BFMP0C1H6 154 aa9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 TNFRSF1AP19438 455 aa9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 TNFSF4P23510 183 aa9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 HTR1FP30939 366 aa9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 DCTDP32321 178 aa9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 RBMXP38159 391 aaKnown RBP9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 PMELP40967 661 aa9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 GATA4P43694 442 aa9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 FAM3AP98173 230 aa9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 MAB21L1Q13394 359 aa9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 LCN1P1Q5VSP4 162 aa9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 LRRN1Q6UXK5 716 aa9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 KRT74Q7RTS7 529 aa9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 MRPL21Q7Z2W9 205 aaKnown RBP9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 GID4Q8IVV7 300 aa9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 BHLHE23Q8NDY6 225 aa9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 OR52H1Q8NGJ2 320 aa9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 ITLN1Q8WWA0 313 aa9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 TRUB1Q8WWH5 349 aaKnown RBP9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 MEGF10Q96KG7 1140 aa9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 OR2V2Q96R30 315 aa9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 SIGLEC11Q96RL6 698 aa9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 MBOAT4Q96T53 435 aa9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 RIBC2Q9H4K1 309 aa9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 OPA3Q9H6K4 179 aa9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 NIPAL2Q9H841 368 aa9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 GCM1Q9NP62 436 aa9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 YAE1D1Q9NRH1 226 aa9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 TMEM106BQ9NUM4 274 aa9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 H2AFY2Q9P0M6 372 aaPredicted RBP9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 WARS2Q9UGM6 360 aaKnown RBP9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 LAMP5Q9UJQ1 280 aa9.92□□□□□ -0.82
HMGXB3-203ENST00000510472 ACOD1A6NK06 481 aa9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 CLDN25C9JDP6 229 aa9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 F5H5P2 479 aa9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 ZNF254O75437 659 aa9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 HLA-DPB1P04440 258 aa9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 MRPL3P09001 348 aaKnown RBP9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 SBK2P0C263 348 aa9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 HSD11B1P28845 292 aa9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 DDOSTP39656 456 aa9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 RAD23AP54725 363 aa9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 CDH15P55291 814 aa9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 SNRPGP62308 76 aaKnown RBP9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 MVKQ03426 396 aa9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 SLC3A1Q07837 685 aa9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 TMED1Q13445 227 aa9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 AVPI1Q5T686 147 aa9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 FAM57BQ71RH2 274 aa9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 ZNF679Q8IYX0 411 aa9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 CELF2-AS1Q8N7Q2 184 aa9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 OR10AD1Q8NGE0 317 aa9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 ASB17Q8WXJ9 295 aa9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 EME1Q96AY2 570 aa9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 OR8B4Q96RC9 309 aa9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 CNN2Q99439 309 aaKnown RBP9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 MNTQ99583 582 aa9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 C9orf16Q9BUW7 83 aa9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 SLC22A4Q9H015 551 aa9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 RGCCQ9H4X1 137 aa9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 SP140LQ9H930 580 aa9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 TREM2Q9NZC2 230 aa9.91□□□□□ -0.82
HMGXB3-203ENST00000510472 MRPL15Q9P015 296 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms