RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 TSPAN15O95858 294 aa13.14□□□□□ -0.31
RAB40C-202ENST00000509637 LCATP04180 440 aa13.14□□□□□ -0.31
RAB40C-202ENST00000509637 H2AFXP16104 143 aaPredicted RBP13.14□□□□□ -0.31
RAB40C-202ENST00000509637 AMY2BP19961 511 aa13.14□□□□□ -0.31
RAB40C-202ENST00000509637 RFX4Q33E94 735 aa13.14□□□□□ -0.31
RAB40C-202ENST00000509637 FGD3Q5JSP0 725 aa13.14□□□□□ -0.31
RAB40C-202ENST00000509637 ZNF362Q5T0B9 420 aaPredicted RBP13.14□□□□□ -0.31
RAB40C-202ENST00000509637 GPR157Q5UAW9 335 aa13.14□□□□□ -0.31
RAB40C-202ENST00000509637 NLRC3Q7RTR2 1065 aa13.14□□□□□ -0.31
RAB40C-202ENST00000509637 WDR86Q86TI4 376 aa13.14□□□□□ -0.31
RAB40C-202ENST00000509637 C1QL4Q86Z23 238 aa13.14□□□□□ -0.31
RAB40C-202ENST00000509637 PDZD9Q8IXQ8 264 aa13.14□□□□□ -0.31
RAB40C-202ENST00000509637 GCSAMQ8N6F7 178 aa13.14□□□□□ -0.31
RAB40C-202ENST00000509637 OR4F5Q8NH21 305 aa13.14□□□□□ -0.31
RAB40C-202ENST00000509637 SEH1LQ96EE3 360 aa13.14□□□□□ -0.31
RAB40C-202ENST00000509637 WDFY2Q96P53 400 aa13.14□□□□□ -0.31
RAB40C-202ENST00000509637 PITX2Q99697 317 aa13.14□□□□□ -0.31
RAB40C-202ENST00000509637 RBM4BQ9BQ04 359 aaKnown RBP13.14□□□□□ -0.31
RAB40C-202ENST00000509637 OR52D1Q9H346 318 aa13.14□□□□□ -0.31
RAB40C-202ENST00000509637 RPRD1BQ9NQG5 326 aaKnown RBP13.14□□□□□ -0.31
RAB40C-202ENST00000509637 RNF7Q9UBF6 113 aa13.14□□□□□ -0.31
RAB40C-202ENST00000509637 IGHV3OR15-7A0A075B7D8 119 aa13.13□□□□□ -0.31
RAB40C-202ENST00000509637 IGHV1-69DA0A0B4J2H0 117 aa13.13□□□□□ -0.31
RAB40C-202ENST00000509637 P2RY10O00398 339 aa13.13□□□□□ -0.31
RAB40C-202ENST00000509637 ARPC3O15145 178 aa13.13□□□□□ -0.31
RAB40C-202ENST00000509637 GPR137BO60478 399 aa13.13□□□□□ -0.31
RAB40C-202ENST00000509637 TOX4O94842 621 aa13.13□□□□□ -0.31
RAB40C-202ENST00000509637 LHBP01229 141 aa13.13□□□□□ -0.31
RAB40C-202ENST00000509637 IGHV1-69P01742 117 aa13.13□□□□□ -0.31
RAB40C-202ENST00000509637 GYPAP02724 150 aa13.13□□□□□ -0.31
RAB40C-202ENST00000509637 SEMG1P04279 462 aa13.13□□□□□ -0.31
RAB40C-202ENST00000509637 RHCEP18577 417 aa13.13□□□□□ -0.31
RAB40C-202ENST00000509637 CRABP1P29762 137 aa13.13□□□□□ -0.31
RAB40C-202ENST00000509637 PYCR1P32322 319 aa13.13□□□□□ -0.31
RAB40C-202ENST00000509637 ARF6P62330 175 aa13.13□□□□□ -0.31
RAB40C-202ENST00000509637 SMARCD3Q6STE5 483 aa13.13□□□□□ -0.31
RAB40C-202ENST00000509637 RRM2BQ7LG56 351 aa13.13□□□□□ -0.31
RAB40C-202ENST00000509637 HDXQ7Z353 690 aa13.13□□□□□ -0.31
RAB40C-202ENST00000509637 FAM90A1Q86YD7 464 aa13.13□□□□□ -0.31
RAB40C-202ENST00000509637 C1orf87Q8N0U7 546 aa13.13□□□□□ -0.31
RAB40C-202ENST00000509637 RP9Q8TA86 221 aaKnown RBP13.13□□□□□ -0.31
RAB40C-202ENST00000509637 LHX4Q969G2 390 aa13.13□□□□□ -0.31
RAB40C-202ENST00000509637 TECTBQ96PL2 329 aa13.13□□□□□ -0.31
RAB40C-202ENST00000509637 ATF6BQ99941 703 aa13.13□□□□□ -0.31
RAB40C-202ENST00000509637 HCAR1Q9BXC0 346 aa13.13□□□□□ -0.31
RAB40C-202ENST00000509637 A0A1B0GUS0 222 aa13.12□□□□□ -0.31
RAB40C-202ENST00000509637 LRRC30A6NM36 301 aa13.12□□□□□ -0.31
RAB40C-202ENST00000509637 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.12□□□□□ -0.31
RAB40C-202ENST00000509637 GSTA4O15217 222 aa13.12□□□□□ -0.31
RAB40C-202ENST00000509637 ADAM20O43506 726 aa13.12□□□□□ -0.31
RAB40C-202ENST00000509637 OR10H3O60404 316 aa13.12□□□□□ -0.31
RAB40C-202ENST00000509637 CLPXO76031 633 aa13.12□□□□□ -0.31
RAB40C-202ENST00000509637 TROVE2P10155 538 aaKnown RBP eCLIP13.12□□□□□ -0.31
RAB40C-202ENST00000509637 OTX1P32242 354 aaPredicted RBP13.12□□□□□ -0.31
RAB40C-202ENST00000509637 IER3P46695 156 aa13.12□□□□□ -0.31
RAB40C-202ENST00000509637 RPS6KA3P51812 740 aa13.12□□□□□ -0.31
RAB40C-202ENST00000509637 TAF9Q16594 264 aa13.12□□□□□ -0.31
RAB40C-202ENST00000509637 GLYATL3Q5SZD4 288 aa13.12□□□□□ -0.31
RAB40C-202ENST00000509637 BRICD5Q6PL45 260 aa13.12□□□□□ -0.31
RAB40C-202ENST00000509637 Q6ZSV7 163 aa13.12□□□□□ -0.31
RAB40C-202ENST00000509637 TMEM86BQ8N661 226 aa13.12□□□□□ -0.31
RAB40C-202ENST00000509637 SDR9C7Q8NEX9 313 aa13.12□□□□□ -0.31
RAB40C-202ENST00000509637 ERGIC1Q969X5 290 aa13.12□□□□□ -0.31
RAB40C-202ENST00000509637 FAM162AQ96A26 154 aa13.12□□□□□ -0.31
RAB40C-202ENST00000509637 MMADHCQ9H3L0 296 aaPredicted RBP13.12□□□□□ -0.31
RAB40C-202ENST00000509637 VIPAS39Q9H9C1 493 aa13.12□□□□□ -0.31
RAB40C-202ENST00000509637 ACOXLQ9NUZ1 547 aa13.12□□□□□ -0.31
RAB40C-202ENST00000509637 DCAF13Q9NV06 445 aaKnown RBP13.12□□□□□ -0.31
RAB40C-202ENST00000509637 ABCD2Q9UBJ2 740 aa13.12□□□□□ -0.31
RAB40C-202ENST00000509637 RNF114Q9Y508 228 aa13.12□□□□□ -0.31
RAB40C-202ENST00000509637 A0A0G2JK05 382 aa13.11□□□□□ -0.31
RAB40C-202ENST00000509637 TVP23AA6NH52 213 aa13.11□□□□□ -0.31
RAB40C-202ENST00000509637 BPIFB3P59826 476 aa13.11□□□□□ -0.31
RAB40C-202ENST00000509637 OR8G1Q15617 311 aa13.11□□□□□ -0.31
RAB40C-202ENST00000509637 SLC35F1Q5T1Q4 408 aa13.11□□□□□ -0.31
RAB40C-202ENST00000509637 GLYATQ6IB77 296 aa13.11□□□□□ -0.31
RAB40C-202ENST00000509637 ZNF620Q6ZNG0 422 aa13.11□□□□□ -0.31
RAB40C-202ENST00000509637 C17orf107Q6ZR85 190 aa13.11□□□□□ -0.31
RAB40C-202ENST00000509637 PGAP1Q75T13 922 aa13.11□□□□□ -0.31
RAB40C-202ENST00000509637 BTN2A1Q7KYR7 527 aa13.11□□□□□ -0.31
RAB40C-202ENST00000509637 OR11L1Q8NGX0 322 aa13.11□□□□□ -0.31
RAB40C-202ENST00000509637 FAM71F1Q96KD3 344 aaPredicted RBP13.11□□□□□ -0.31
RAB40C-202ENST00000509637 CCT8L2Q96SF2 557 aa13.11□□□□□ -0.31
RAB40C-202ENST00000509637 PKP2Q99959 881 aa13.11□□□□□ -0.31
RAB40C-202ENST00000509637 C1orf123Q9NWV4 160 aa13.11□□□□□ -0.31
RAB40C-202ENST00000509637 ERVK-18Q9QC07 812 aa13.11□□□□□ -0.31
RAB40C-202ENST00000509637 AURKCQ9UQB9 309 aa13.11□□□□□ -0.31
RAB40C-202ENST00000509637 POMT1Q9Y6A1 747 aa13.11□□□□□ -0.31
RAB40C-202ENST00000509637 V9GYQ6 96 aa13.11□□□□□ -0.31
RAB40C-202ENST00000509637 MEGF11A6BM72 1044 aa13.1□□□□□ -0.31
RAB40C-202ENST00000509637 M0R135 149 aa13.1□□□□□ -0.31
RAB40C-202ENST00000509637 DVL1O14640 695 aa13.1□□□□□ -0.31
RAB40C-202ENST00000509637 TFF1P04155 84 aa13.1□□□□□ -0.31
RAB40C-202ENST00000509637 CRYBA1P05813 215 aa13.1□□□□□ -0.31
RAB40C-202ENST00000509637 GRPP07492 148 aa13.1□□□□□ -0.31
RAB40C-202ENST00000509637 SLC2A1P11166 492 aa13.1□□□□□ -0.31
RAB40C-202ENST00000509637 IRF2P14316 349 aa13.1□□□□□ -0.31
RAB40C-202ENST00000509637 GSSP48637 474 aa13.1□□□□□ -0.31
RAB40C-202ENST00000509637 PGM2L1Q6PCE3 622 aa13.1□□□□□ -0.31
RAB40C-202ENST00000509637 ARPINQ7Z6K5 226 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms