RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 RLN2P04090 185 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 MRPL3P09001 348 aaKnown RBP1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 SLC35G6P0C7Q6 338 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 HSPD1P10809 573 aaKnown RBP1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 MLNP12872 115 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 RAB3BP20337 219 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 FMO3P31513 532 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 PFN2P35080 140 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 GPX4P36969 197 aaPredicted RBP1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 CSNK1DP48730 415 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 GSK3BP49841 420 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 RPL14P50914 215 aaKnown RBP1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 RAB7AP51149 207 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 FABP6P51161 128 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 DLX1P56177 255 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 OR12D2P58182 307 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 RAB8AP61006 207 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 RAP1BP61224 184 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 RPL10AP62906 217 aaKnown RBP1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 PAFAH1B2P68402 229 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 SEMG2Q02383 582 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 SLC25A11Q02978 314 aaKnown RBP1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 TGFBR3Q03167 851 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 CKAP4Q07065 602 aaKnown RBP1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 ASAH1Q13510 395 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 RAB31Q13636 194 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 GGTLC2Q14390 218 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 CASP8Q14790 479 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 SIX1Q15475 284 aaPredicted RBP1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 TGIF1Q15583 401 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 ZNHIT3Q15649 155 aaPredicted RBP1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 RFX4Q33E94 735 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 OR2B11Q5JQS5 317 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 AVPI1Q5T686 147 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 GPRC6AQ5T6X5 926 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 FAM27D1Q5T7N8 215 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 SYT6Q5T7P8 510 aaPredicted RBP1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 ANKRD22Q5VYY1 191 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 SPOPLQ6IQ16 392 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 ZNF343Q6P1L6 599 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 UGT2A3Q6UWM9 527 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 NPSR1Q6W5P4 371 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 BOD1L2Q8IYS8 172 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 FAM71AQ8IYT1 594 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 PGAM4Q8N0Y7 254 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 Q8N377 158 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 C19orf18Q8NEA5 215 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 CCDC54Q8NEL0 328 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 OR4K17Q8NGC6 315 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 OR1S1Q8NH92 325 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 SFXN5Q8TD22 340 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 AGAP11Q8TF27 550 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 RNF138Q8WVD3 245 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 GEMIN6Q8WXD5 167 aaKnown RBP1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 TMEM234Q8WY98 164 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 TMEM54Q969K7 222 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 NOL4LQ96MY1 436 aaPredicted RBP1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 ZNF75AQ96N20 296 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 OR2M4Q96R27 311 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 TEAD3Q99594 435 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 EBF4Q9BQW3 602 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 C9orf16Q9BUW7 83 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 POLR2J2Q9GZM3 115 aaKnown RBP1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 COA1Q9GZY4 146 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 PARP12Q9H0J9 701 aaKnown RBP1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 POLR2J3Q9H1A7 115 aaKnown RBP1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 ASB8Q9H765 288 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 ZDHHC11Q9H8X9 412 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 SLC25A22Q9H936 323 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 KCNJ16Q9NPI9 418 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 DIABLOQ9NR28 239 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 PLEKHJ1Q9NW61 149 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 DNAJC27Q9NZQ0 273 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 APOBEC3BQ9UH17 382 aaKnown RBP1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 CLEC4EQ9ULY5 219 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 TFR2Q9UP52 801 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 OR51B2Q9Y5P1 312 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 V9GYQ6 96 aa1.84□□□□□ -2.11
DEPDC1B-204ENST00000509006 MROH7Q68CQ1 1323 aa1.84□□□□□ -2.12
DEPDC1B-204ENST00000509006 IGLV3-22A0A075B6J6 115 aa1.83□□□□□ -2.12
DEPDC1B-204ENST00000509006 IGHV1OR15-1A0A075B7D0 117 aa1.83□□□□□ -2.12
DEPDC1B-204ENST00000509006 A0A1W2PPR1 153 aa1.83□□□□□ -2.12
DEPDC1B-204ENST00000509006 ISPDA4D126 451 aa1.83□□□□□ -2.12
DEPDC1B-204ENST00000509006 RBMY1BA6NDE4 496 aaKnown RBP1.83□□□□□ -2.12
DEPDC1B-204ENST00000509006 RBMY1EA6NEQ0 496 aaKnown RBP1.83□□□□□ -2.12
DEPDC1B-204ENST00000509006 M0QZ92 97 aa1.83□□□□□ -2.12
DEPDC1B-204ENST00000509006 M0R1B8 84 aa1.83□□□□□ -2.12
DEPDC1B-204ENST00000509006 TNFRSF11BO00300 401 aa1.83□□□□□ -2.12
DEPDC1B-204ENST00000509006 PHYHO14832 338 aa1.83□□□□□ -2.12
DEPDC1B-204ENST00000509006 HDAC3O15379 428 aa1.83□□□□□ -2.12
DEPDC1B-204ENST00000509006 SLC31A2O15432 143 aa1.83□□□□□ -2.12
DEPDC1B-204ENST00000509006 DENRO43583 198 aaKnown RBP1.83□□□□□ -2.12
DEPDC1B-204ENST00000509006 STX10O60499 249 aa1.83□□□□□ -2.12
DEPDC1B-204ENST00000509006 SNAP91O60641 907 aa1.83□□□□□ -2.12
DEPDC1B-204ENST00000509006 DPM1O60762 260 aa1.83□□□□□ -2.12
DEPDC1B-204ENST00000509006 SRP72O76094 671 aaKnown RBP1.83□□□□□ -2.12
DEPDC1B-204ENST00000509006 NSA2O95478 260 aaKnown RBP1.83□□□□□ -2.12
DEPDC1B-204ENST00000509006 CSF3P09919 207 aa1.83□□□□□ -2.12
DEPDC1B-204ENST00000509006 OR8U8P0C7N1 319 aa1.83□□□□□ -2.12
DEPDC1B-204ENST00000509006 RBMY1DP0C7P1 496 aaKnown RBP1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms