RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 TMEM139Q8IV31 216 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 GLB1L2Q8IW92 636 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 PLPP5Q8NEB5 264 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 DCUN1D4Q92564 292 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 EMG1Q92979 244 aaKnown RBP2.65□□□□□ -1.98
NEDD4-208ENST00000508342 OR52B2Q96RD2 323 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 RTL8AQ9BWD3 113 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 MS4A8Q9BY19 250 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 FAM60AQ9NP50 221 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 TREM1Q9NP99 234 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 HEYLQ9NQ87 328 aaPredicted RBP2.65□□□□□ -1.98
NEDD4-208ENST00000508342 MAN2C1Q9NTJ4 1040 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 SEC14L4Q9UDX3 406 aa2.65□□□□□ -1.98
NEDD4-208ENST00000508342 SERINC4A6NH21 518 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 FAM159BA6NKW6 160 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 F2RL2O00254 374 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 GOSR2O14653 212 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 DEGS1O15121 323 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 XRCC2O43543 280 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 TUSC2O75896 110 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 AKR7A3O95154 331 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 CSF3P09919 207 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 OR8U9P0C7N5 309 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 SLC2A2P11168 524 aaPredicted RBP2.65□□□□□ -1.99
NEDD4-208ENST00000508342 GLRA1P23415 457 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 COL8A1P27658 744 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 CA7P43166 264 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 MTNR1AP48039 350 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 MMP16P51512 607 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 MAP4K2Q12851 820 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 ZFP69Q49AA0 526 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 AADACL3Q5VUY0 350 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 FAM166AQ6J272 317 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 FAM198BQ6UWH4 519 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 SSX8Q7RTT4 187 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 PQLC1Q8N2U9 271 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 IQCF1Q8N6M8 205 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 OR13J1Q8NGT2 312 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 OR10D3Q8NH80 312 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 NEIL3Q8TAT5 605 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 HPSE2Q8WWQ2 592 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 ISL2Q96A47 359 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 MOB3AQ96BX8 217 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 TM4SF18Q96CE8 201 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 WBP1Q96G27 269 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 SLC41A3Q96GZ6 507 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 RAX2Q96IS3 184 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 SAMD8Q96LT4 415 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 SIGLEC12Q96PQ1 595 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 TPPP3Q9BW30 176 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 SLCO1B3Q9NPD5 702 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 TREX1Q9NSU2 369 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 SLC22A13Q9Y226 551 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 EXOSC1Q9Y3B2 195 aaKnown RBP2.65□□□□□ -1.99
NEDD4-208ENST00000508342 TRAV8-7A0A075B6U6 113 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 TAPBPO15533 448 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 GPR137BO60478 399 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 DOK2O60496 412 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 TRMUO75648 421 aaKnown RBP2.65□□□□□ -1.99
NEDD4-208ENST00000508342 DIRAS1O95057 198 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 SHBGP04278 402 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 IGFBP1P08833 259 aaPredicted RBP2.65□□□□□ -1.99
NEDD4-208ENST00000508342 CD8BP10966 210 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 NKX6-1P78426 367 aaPredicted RBP2.65□□□□□ -1.99
NEDD4-208ENST00000508342 ERHP84090 104 aaKnown RBP2.65□□□□□ -1.99
NEDD4-208ENST00000508342 TMEM267Q0VDI3 215 aaPredicted RBP2.65□□□□□ -1.99
NEDD4-208ENST00000508342 SELENBP1Q13228 472 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 TPBGQ13641 420 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 CLEC12BQ2HXU8 276 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 ADPRMQ3LIE5 342 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 PLA1AQ53H76 456 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 BEX5Q5H9J7 111 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 C6orf52Q5T4I8 152 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 VASNQ6EMK4 673 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 ISCA2Q86U28 154 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 GABRG1Q8N1C3 465 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 FITM2Q8N6M3 262 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 OR5AK2Q8NH90 309 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 OR2T6Q8NHC8 308 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 TRUB1Q8WWH5 349 aaKnown RBP2.65□□□□□ -1.99
NEDD4-208ENST00000508342 ACOT11Q8WXI4 607 aaPredicted RBP2.65□□□□□ -1.99
NEDD4-208ENST00000508342 RPEQ96AT9 228 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 ANKRD19PQ9H560 264 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 TMEM181Q9P2C4 612 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 SLC17A7Q9P2U7 560 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 PEX16Q9Y5Y5 336 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 DOCK4Q8N1I0 1966 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 ABCA2Q9BZC7 2435 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 KCNE1BA0A087WTH5 132 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 FXYD6-FXYD2A0A087WZ82 144 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 TMEM269A0A1B0GVZ9 245 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 E9PLN8 166 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 ITM2AO43736 263 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 CT45A10P0DMU9 189 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 CCL3P10147 92 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 SRD5A1P18405 259 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 SERPINA2P20848 420 aa2.65□□□□□ -1.99
NEDD4-208ENST00000508342 BLVRBP30043 206 aaPredicted RBP2.65□□□□□ -1.99
NEDD4-208ENST00000508342 PEBP1P30086 187 aaKnown RBP2.65□□□□□ -1.99
NEDD4-208ENST00000508342 FOXL2P58012 376 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms