RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 JMJD1CQ15652 2540 aa16.81■□□□□ 0.28
SFXN1-209ENST00000508290 TRAV20A0A0B4J274 112 aa16.81■□□□□ 0.28
SFXN1-209ENST00000508290 LRRC30A6NM36 301 aa16.81■□□□□ 0.28
SFXN1-209ENST00000508290 EBAG9O00559 213 aa16.81■□□□□ 0.28
SFXN1-209ENST00000508290 FSTL3O95633 263 aa16.81■□□□□ 0.28
SFXN1-209ENST00000508290 LYNP07948 512 aa16.81■□□□□ 0.28
SFXN1-209ENST00000508290 MZT1Q08AG7 82 aa16.81■□□□□ 0.28
SFXN1-209ENST00000508290 TMEM155Q4W5P6 130 aa16.81■□□□□ 0.28
SFXN1-209ENST00000508290 KLHL12Q53G59 568 aa16.81■□□□□ 0.28
SFXN1-209ENST00000508290 KDM4DQ6B0I6 523 aa16.81■□□□□ 0.28
SFXN1-209ENST00000508290 ZFP1Q6P2D0 407 aa16.81■□□□□ 0.28
SFXN1-209ENST00000508290 SPERTQ8NA61 448 aa16.81■□□□□ 0.28
SFXN1-209ENST00000508290 ITLN1Q8WWA0 313 aa16.81■□□□□ 0.28
SFXN1-209ENST00000508290 ITFG2Q969R8 447 aa16.81■□□□□ 0.28
SFXN1-209ENST00000508290 TMEM186Q96B77 213 aa16.81■□□□□ 0.28
SFXN1-209ENST00000508290 MEGF10Q96KG7 1140 aa16.81■□□□□ 0.28
SFXN1-209ENST00000508290 NARFLQ9H6Q4 476 aa16.81■□□□□ 0.28
SFXN1-209ENST00000508290 TVP23BQ9NYZ1 205 aa16.81■□□□□ 0.28
SFXN1-209ENST00000508290 TREM2Q9NZC2 230 aa16.81■□□□□ 0.28
SFXN1-209ENST00000508290 MRPL15Q9P015 296 aaKnown RBP16.81■□□□□ 0.28
SFXN1-209ENST00000508290 TMEFF2Q9UIK5 374 aaPredicted RBP16.81■□□□□ 0.28
SFXN1-209ENST00000508290 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.81■□□□□ 0.282e-13■■■■■ 40.1
SFXN1-209ENST00000508290 CD300LBA8K4G0 201 aa16.8■□□□□ 0.28
SFXN1-209ENST00000508290 GMDSO60547 372 aa16.8■□□□□ 0.28
SFXN1-209ENST00000508290 IGHV2-5P01817 119 aa16.8■□□□□ 0.28
SFXN1-209ENST00000508290 PSKH1P11801 424 aa16.8■□□□□ 0.28
SFXN1-209ENST00000508290 SRD5A1P18405 259 aa16.8■□□□□ 0.28
SFXN1-209ENST00000508290 OPRL1P41146 370 aa16.8■□□□□ 0.28
SFXN1-209ENST00000508290 GATA4P43694 442 aa16.8■□□□□ 0.28
SFXN1-209ENST00000508290 PRKXP51817 358 aa16.8■□□□□ 0.28
SFXN1-209ENST00000508290 ACTR3P61158 418 aa16.8■□□□□ 0.28
SFXN1-209ENST00000508290 RPS7P62081 194 aaKnown RBP16.8■□□□□ 0.28
SFXN1-209ENST00000508290 CR1LQ2VPA4 569 aa16.8■□□□□ 0.28
SFXN1-209ENST00000508290 AVPI1Q5T686 147 aa16.8■□□□□ 0.28
SFXN1-209ENST00000508290 NAA40Q86UY6 237 aa16.8■□□□□ 0.28
SFXN1-209ENST00000508290 PRIMA1Q86XR5 153 aa16.8■□□□□ 0.28
SFXN1-209ENST00000508290 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.8■□□□□ 0.28
SFXN1-209ENST00000508290 C1orf87Q8N0U7 546 aa16.8■□□□□ 0.28
SFXN1-209ENST00000508290 MUC20Q8N307 709 aaPredicted RBP16.8■□□□□ 0.28
SFXN1-209ENST00000508290 PLPP7Q8NBV4 271 aa16.8■□□□□ 0.28
SFXN1-209ENST00000508290 BHLHE23Q8NDY6 225 aa16.8■□□□□ 0.28
SFXN1-209ENST00000508290 SPSB4Q96A44 273 aa16.8■□□□□ 0.28
SFXN1-209ENST00000508290 ZMYND19Q96E35 227 aaPredicted RBP16.8■□□□□ 0.28
SFXN1-209ENST00000508290 YIPF3Q9GZM5 350 aa16.8■□□□□ 0.28
SFXN1-209ENST00000508290 GCM1Q9NP62 436 aa16.8■□□□□ 0.28
SFXN1-209ENST00000508290 ZNF391Q9UJN7 358 aa16.8■□□□□ 0.28
SFXN1-209ENST00000508290 TMEM14AQ9Y6G1 99 aa16.8■□□□□ 0.28
SFXN1-209ENST00000508290 YLPM1P49750 1951 aaKnown RBP16.8■□□□□ 0.28
SFXN1-209ENST00000508290 ISPDA4D126 451 aa16.79■□□□□ 0.28
SFXN1-209ENST00000508290 GGT3PA6NGU5 568 aa16.79■□□□□ 0.28
SFXN1-209ENST00000508290 H2BFMP0C1H6 154 aa16.79■□□□□ 0.28
SFXN1-209ENST00000508290 SLC2A5P22732 501 aa16.79■□□□□ 0.28
SFXN1-209ENST00000508290 GATA3P23771 443 aa16.79■□□□□ 0.28
SFXN1-209ENST00000508290 CX3CR1P49238 355 aa16.79■□□□□ 0.28
SFXN1-209ENST00000508290 SCGB2A2Q13296 93 aa16.79■□□□□ 0.28
SFXN1-209ENST00000508290 SNAI3Q3KNW1 292 aa16.79■□□□□ 0.28
SFXN1-209ENST00000508290 SLX4IPQ5VYV7 408 aa16.79■□□□□ 0.28
SFXN1-209ENST00000508290 TMEM236Q5W0B7 351 aa16.79■□□□□ 0.28
SFXN1-209ENST00000508290 DEGS2Q6QHC5 323 aa16.79■□□□□ 0.28
SFXN1-209ENST00000508290 SLC16A9Q7RTY1 509 aa16.79■□□□□ 0.28
SFXN1-209ENST00000508290 FTMTQ8N4E7 242 aa16.79■□□□□ 0.28
SFXN1-209ENST00000508290 KLHL36Q8N4N3 616 aa16.79■□□□□ 0.28
SFXN1-209ENST00000508290 OR10AD1Q8NGE0 317 aa16.79■□□□□ 0.28
SFXN1-209ENST00000508290 ZAR1LA6NP61 321 aa16.78■□□□□ 0.28
SFXN1-209ENST00000508290 WNT9BO14905 357 aa16.78■□□□□ 0.28
SFXN1-209ENST00000508290 MLNRO43193 412 aa16.78■□□□□ 0.28
SFXN1-209ENST00000508290 IGHV2-70P01814 119 aa16.78■□□□□ 0.28
SFXN1-209ENST00000508290 ANXA2P07355 339 aaKnown RBP16.78■□□□□ 0.28
SFXN1-209ENST00000508290 CD200P41217 278 aa16.78■□□□□ 0.28
SFXN1-209ENST00000508290 MMP16P51512 607 aa16.78■□□□□ 0.28
SFXN1-209ENST00000508290 BTG1P62324 171 aa16.78■□□□□ 0.28
SFXN1-209ENST00000508290 ZNF92Q03936 586 aa16.78■□□□□ 0.28
SFXN1-209ENST00000508290 TIGD6Q17RP2 521 aa16.78■□□□□ 0.28
SFXN1-209ENST00000508290 GLYATL3Q5SZD4 288 aa16.78■□□□□ 0.28
SFXN1-209ENST00000508290 KCTD18Q6PI47 426 aaPredicted RBP16.78■□□□□ 0.28
SFXN1-209ENST00000508290 LRTOMTQ8WZ04 291 aa16.78■□□□□ 0.28
SFXN1-209ENST00000508290 MNTQ99583 582 aa16.78■□□□□ 0.28
SFXN1-209ENST00000508290 TEAD3Q99594 435 aa16.78■□□□□ 0.28
SFXN1-209ENST00000508290 RBM4BQ9BQ04 359 aaKnown RBP16.78■□□□□ 0.28
SFXN1-209ENST00000508290 OR10A2Q9H208 303 aa16.78■□□□□ 0.28
SFXN1-209ENST00000508290 HIF1ANQ9NWT6 349 aa16.78■□□□□ 0.28
SFXN1-209ENST00000508290 LAMP5Q9UJQ1 280 aa16.78■□□□□ 0.28
SFXN1-209ENST00000508290 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.77■□□□□ 0.28
SFXN1-209ENST00000508290 SLC22A31A6NKX4 558 aa16.77■□□□□ 0.28
SFXN1-209ENST00000508290 FAM157AC9JC47 383 aa16.77■□□□□ 0.28
SFXN1-209ENST00000508290 TMEM178BH3BS89 294 aa16.77■□□□□ 0.28
SFXN1-209ENST00000508290 IRF2P14316 349 aa16.77■□□□□ 0.28
SFXN1-209ENST00000508290 MDH2P40926 338 aaKnown RBP16.77■□□□□ 0.28
SFXN1-209ENST00000508290 APOFQ13790 326 aa16.77■□□□□ 0.28
SFXN1-209ENST00000508290 OR8G1Q15617 311 aa16.77■□□□□ 0.28
SFXN1-209ENST00000508290 NXNL2Q5VZ03 156 aa16.77■□□□□ 0.28
SFXN1-209ENST00000508290 AMIGO2Q86SJ2 522 aa16.77■□□□□ 0.28
SFXN1-209ENST00000508290 LRRC28Q86X40 367 aaPredicted RBP16.77■□□□□ 0.28
SFXN1-209ENST00000508290 GID4Q8IVV7 300 aa16.77■□□□□ 0.28
SFXN1-209ENST00000508290 Q8TCH9 128 aa16.77■□□□□ 0.28
SFXN1-209ENST00000508290 THEM6Q8WUY1 208 aa16.77■□□□□ 0.28
SFXN1-209ENST00000508290 ASB17Q8WXJ9 295 aa16.77■□□□□ 0.28
SFXN1-209ENST00000508290 H2AFY2Q9P0M6 372 aaPredicted RBP16.77■□□□□ 0.28
SFXN1-209ENST00000508290 OAZ3Q9UMX2 235 aa16.77■□□□□ 0.28
SFXN1-209ENST00000508290 PCDHB10Q9UN67 800 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms