RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 NCOR1P1Q9H4R4 102 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 TMEM27Q9HBJ8 222 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 MED4Q9NPJ6 270 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 PXMP2Q9NR77 195 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 C8orf17Q9NRJ1 99 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 MRPL22Q9NWU5 206 aaKnown RBP1.95□□□□□ -2.1
LSM6-205ENST00000507449 RHBDD3Q9Y3P4 386 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 SAR1BQ9Y6B6 198 aa1.95□□□□□ -2.1
LSM6-205ENST00000507449 IGKV1-27A0A075B6S5 117 aa1.94□□□□□ -2.1
LSM6-205ENST00000507449 IGHV3OR16-9A0A0B4J2B5 98 aa1.94□□□□□ -2.1
LSM6-205ENST00000507449 IGHV1-69DA0A0B4J2H0 117 aa1.94□□□□□ -2.1
LSM6-205ENST00000507449 A0A1W2PRD5 423 aa1.94□□□□□ -2.1
LSM6-205ENST00000507449 TMEM150BA6NC51 233 aa1.94□□□□□ -2.1
LSM6-205ENST00000507449 GABRR3A8MPY1 467 aa1.94□□□□□ -2.1
LSM6-205ENST00000507449 SYCE1LA8MT33 242 aa1.94□□□□□ -2.1
LSM6-205ENST00000507449 VAMP5O95183 116 aa1.94□□□□□ -2.1
LSM6-205ENST00000507449 MPZL1O95297 269 aa1.94□□□□□ -2.1
LSM6-205ENST00000507449 TDP2O95551 362 aa1.94□□□□□ -2.1
LSM6-205ENST00000507449 CCNE2O96020 404 aa1.94□□□□□ -2.1
LSM6-205ENST00000507449 KRT16P08779 473 aa1.94□□□□□ -2.1
LSM6-205ENST00000507449 ZNF286BP0CG31 522 aa1.94□□□□□ -2.1
LSM6-205ENST00000507449 CD37P11049 281 aa1.94□□□□□ -2.1
LSM6-205ENST00000507449 CD82P27701 267 aa1.94□□□□□ -2.1
LSM6-205ENST00000507449 PFN2P35080 140 aa1.94□□□□□ -2.1
LSM6-205ENST00000507449 POLR2IP36954 125 aaKnown RBP1.94□□□□□ -2.1
LSM6-205ENST00000507449 CXCL12P48061 93 aa1.94□□□□□ -2.1
LSM6-205ENST00000507449 CRADDP78560 199 aa1.94□□□□□ -2.1
LSM6-205ENST00000507449 CDC20Q12834 499 aa1.94□□□□□ -2.1
LSM6-205ENST00000507449 SLC39A6Q13433 755 aa1.94□□□□□ -2.1
LSM6-205ENST00000507449 RNASE13Q5GAN3 156 aaKnown RBP1.94□□□□□ -2.1
LSM6-205ENST00000507449 ADNP2Q6IQ32 1131 aa1.94□□□□□ -2.1
LSM6-205ENST00000507449 SNX20Q7Z614 316 aa1.94□□□□□ -2.1
LSM6-205ENST00000507449 H1FOOQ8IZA3 346 aaPredicted RBP1.94□□□□□ -2.1
LSM6-205ENST00000507449 VKORC1L1Q8N0U8 176 aa1.94□□□□□ -2.1
LSM6-205ENST00000507449 CA5BP1Q8WTZ4 195 aa1.94□□□□□ -2.1
LSM6-205ENST00000507449 BTN2A3PQ96KV6 586 aa1.94□□□□□ -2.1
LSM6-205ENST00000507449 JSRP1Q96MG2 331 aaPredicted RBP1.94□□□□□ -2.1
LSM6-205ENST00000507449 RBBP8Q99708 897 aa1.94□□□□□ -2.1
LSM6-205ENST00000507449 OR2AG1Q9H205 316 aa1.94□□□□□ -2.1
LSM6-205ENST00000507449 MYOZ1Q9NP98 299 aaPredicted RBP1.94□□□□□ -2.1
LSM6-205ENST00000507449 GGA2Q9UJY4 613 aa1.94□□□□□ -2.1
LSM6-205ENST00000507449 HYOU1Q9Y4L1 999 aa1.94□□□□□ -2.1
LSM6-205ENST00000507449 MROH7Q68CQ1 1323 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 IGHV3-72A0A0B4J1Y9 119 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 ANKRD65E5RJM6 399 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 BET1O15155 118 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 SLC22A5O76082 557 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 GLSO94925 669 aaPredicted RBP1.93□□□□□ -2.1
LSM6-205ENST00000507449 HLA-DQA1P01909 254 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 NPY1RP25929 384 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 MYCNOSP40205 109 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 PPICP45877 212 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 OR1G1P47890 313 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 TAS2R31P59538 309 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 ATP6V0D1P61421 351 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 RAB11AP62491 216 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 CYP24A1Q07973 514 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 RAB11BQ15907 218 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 LY6EQ16553 131 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 PLCXD3Q63HM9 321 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 ZNF880Q6PDB4 577 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 WDR82Q6UXN9 313 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 SHISA6Q6ZSJ9 500 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 OTUD6AQ7L8S5 288 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 ZNF547Q8IVP9 402 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 NECAP1Q8NC96 275 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 LINC01560Q8TB33 94 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 C17orf50Q8WW18 174 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 RAB1CQ92928 201 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 ISG20Q96AZ6 181 aaKnown RBP1.93□□□□□ -2.1
LSM6-205ENST00000507449 APH1AQ96BI3 265 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 L3HYPDHQ96EM0 354 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 C9orf72Q96LT7 481 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 C18orf15Q96N68 181 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 TMEM243Q9BU79 118 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 RSPO3Q9BXY4 272 aaPredicted RBP1.93□□□□□ -2.1
LSM6-205ENST00000507449 NAA50Q9GZZ1 169 aaKnown RBP1.93□□□□□ -2.1
LSM6-205ENST00000507449 RRAGDQ9NQL2 400 aaPredicted RBP1.93□□□□□ -2.1
LSM6-205ENST00000507449 RGS18Q9NS28 235 aa1.93□□□□□ -2.1
LSM6-205ENST00000507449 TRAV19A0A0A6YYK7 116 aa1.92□□□□□ -2.1
LSM6-205ENST00000507449 TMEM120BA0PK00 339 aa1.92□□□□□ -2.1
LSM6-205ENST00000507449 NDUFC2-KCTD14E9PQ53 114 aa1.92□□□□□ -2.1
LSM6-205ENST00000507449 SLC16A7O60669 478 aa1.92□□□□□ -2.1
LSM6-205ENST00000507449 SERPINB7O75635 380 aa1.92□□□□□ -2.1
LSM6-205ENST00000507449 IGLV3-25P01717 112 aa1.92□□□□□ -2.1
LSM6-205ENST00000507449 CD74P04233 296 aa1.92□□□□□ -2.1
LSM6-205ENST00000507449 C1GALT1C1LP0DN25 315 aa1.92□□□□□ -2.1
LSM6-205ENST00000507449 RALBP11234 206 aa1.92□□□□□ -2.1
LSM6-205ENST00000507449 TCP1P17987 556 aaKnown RBP1.92□□□□□ -2.1
LSM6-205ENST00000507449 MAGEA1P43355 309 aa1.92□□□□□ -2.1
LSM6-205ENST00000507449 DAOAP59103 153 aa1.92□□□□□ -2.1
LSM6-205ENST00000507449 TAS2R46P59540 309 aa1.92□□□□□ -2.1
LSM6-205ENST00000507449 SIGLEC14Q08ET2 396 aa1.92□□□□□ -2.1
LSM6-205ENST00000507449 ZNF816Q0VGE8 651 aaPredicted RBP1.92□□□□□ -2.1
LSM6-205ENST00000507449 ZNF829Q3KNS6 432 aaPredicted RBP1.92□□□□□ -2.1
LSM6-205ENST00000507449 ZFP1Q6P2D0 407 aa1.92□□□□□ -2.1
LSM6-205ENST00000507449 LINC00336Q6ZUF6 198 aa1.92□□□□□ -2.1
LSM6-205ENST00000507449 CMTM8Q8IZV2 173 aa1.92□□□□□ -2.1
LSM6-205ENST00000507449 OSR2Q8N2R0 312 aa1.92□□□□□ -2.1
LSM6-205ENST00000507449 ZNF645Q8N7E2 425 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms