RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 A0A1W2PQD3 144 aa15.8■□□□□ 0.12
NUP54-205ENST00000507257 JTBO76095 146 aa15.8■□□□□ 0.12
NUP54-205ENST00000507257 GLP1RP43220 463 aa15.8■□□□□ 0.12
NUP54-205ENST00000507257 PPT1P50897 306 aa15.8■□□□□ 0.12
NUP54-205ENST00000507257 FAM3AP98173 230 aa15.8■□□□□ 0.12
NUP54-205ENST00000507257 RBM39Q14498 530 aaKnown RBP15.8■□□□□ 0.12
NUP54-205ENST00000507257 DNM1P34Q6PK57 102 aa15.8■□□□□ 0.12
NUP54-205ENST00000507257 CHRDL2Q6WN34 429 aa15.8■□□□□ 0.12
NUP54-205ENST00000507257 BMFQ96LC9 184 aa15.8■□□□□ 0.12
NUP54-205ENST00000507257 SLC46A1Q96NT5 459 aa15.8■□□□□ 0.12
NUP54-205ENST00000507257 OCSTAMPQ9BR26 566 aa15.8■□□□□ 0.12
NUP54-205ENST00000507257 OR2S2Q9NQN1 319 aa15.8■□□□□ 0.12
NUP54-205ENST00000507257 CUTCQ9NTM9 273 aa15.8■□□□□ 0.12
NUP54-205ENST00000507257 FRG2CA6NGY1 282 aa15.8■□□□□ 0.12
NUP54-205ENST00000507257 C9JQL5 133 aa15.8■□□□□ 0.12
NUP54-205ENST00000507257 PRAMEF26H0Y7S4 382 aa15.8■□□□□ 0.12
NUP54-205ENST00000507257 ADAP1O75689 374 aa15.8■□□□□ 0.12
NUP54-205ENST00000507257 HKR1P10072 659 aa15.8■□□□□ 0.12
NUP54-205ENST00000507257 ZNF823P16415 610 aa15.8■□□□□ 0.12
NUP54-205ENST00000507257 MAS1LP35410 378 aa15.8■□□□□ 0.12
NUP54-205ENST00000507257 KIR2DL1P43626 348 aaPredicted RBP15.8■□□□□ 0.12
NUP54-205ENST00000507257 ZNF117Q03924 483 aa15.8■□□□□ 0.12
NUP54-205ENST00000507257 RAB32Q13637 225 aa15.8■□□□□ 0.12
NUP54-205ENST00000507257 OTPQ5XKR4 325 aa15.8■□□□□ 0.12
NUP54-205ENST00000507257 RPL7L1Q6DKI1 246 aaKnown RBP15.8■□□□□ 0.12
NUP54-205ENST00000507257 OR52N4Q8NGI2 321 aa15.8■□□□□ 0.12
NUP54-205ENST00000507257 TCTEX1D2Q8WW35 142 aa15.8■□□□□ 0.12
NUP54-205ENST00000507257 ROBO4Q8WZ75 1007 aa15.8■□□□□ 0.12
NUP54-205ENST00000507257 TMEM41AQ96HV5 264 aa15.8■□□□□ 0.12
NUP54-205ENST00000507257 FOXN4Q96NZ1 517 aa15.8■□□□□ 0.12
NUP54-205ENST00000507257 RTBDNQ9BSG5 229 aaPredicted RBP15.8■□□□□ 0.12
NUP54-205ENST00000507257 MIOXQ9UGB7 285 aa15.8■□□□□ 0.12
NUP54-205ENST00000507257 MYO7AQ13402 2215 aa15.79■□□□□ 0.12
NUP54-205ENST00000507257 C2orf16Q68DN1 1984 aa15.79■□□□□ 0.12
NUP54-205ENST00000507257 KIR2DS5A0A0G2JLQ3 304 aa15.79■□□□□ 0.12
NUP54-205ENST00000507257 A0A0G2JNG1 304 aa15.79■□□□□ 0.12
NUP54-205ENST00000507257 A6NIZ1 184 aa15.79■□□□□ 0.12
NUP54-205ENST00000507257 KIR2DS3K7RE56 304 aa15.79■□□□□ 0.12
NUP54-205ENST00000507257 PLPP3O14495 311 aa15.79■□□□□ 0.12
NUP54-205ENST00000507257 LMX1BO60663 402 aa15.79■□□□□ 0.12
NUP54-205ENST00000507257 TNFRSF4P43489 277 aa15.79■□□□□ 0.12
NUP54-205ENST00000507257 SLC37A1P57057 533 aa15.79■□□□□ 0.12
NUP54-205ENST00000507257 RAP1BP61224 184 aa15.79■□□□□ 0.12
NUP54-205ENST00000507257 RAP1AP62834 184 aa15.79■□□□□ 0.12
NUP54-205ENST00000507257 FABP9Q0Z7S8 132 aa15.79■□□□□ 0.12
NUP54-205ENST00000507257 KIR2DS5Q14953 304 aa15.79■□□□□ 0.12
NUP54-205ENST00000507257 SURF2Q15527 256 aaPredicted RBP15.79■□□□□ 0.12
NUP54-205ENST00000507257 C1QL3Q5VWW1 255 aa15.79■□□□□ 0.12
NUP54-205ENST00000507257 OPN5Q6U736 354 aa15.79■□□□□ 0.12
NUP54-205ENST00000507257 MARCH3Q86UD3 253 aa15.79■□□□□ 0.12
NUP54-205ENST00000507257 RNF133Q8WVZ7 376 aa15.79■□□□□ 0.12
NUP54-205ENST00000507257 FGGYQ96C11 551 aa15.79■□□□□ 0.12
NUP54-205ENST00000507257 OR10C1Q96KK4 312 aa15.79■□□□□ 0.12
NUP54-205ENST00000507257 NAA11Q9BSU3 229 aaPredicted RBP15.79■□□□□ 0.12
NUP54-205ENST00000507257 LPAR5Q9H1C0 372 aa15.79■□□□□ 0.12
NUP54-205ENST00000507257 PPP4R1LQ9P1A2 415 aa15.79■□□□□ 0.12
NUP54-205ENST00000507257 COA3Q9Y2R0 106 aaPredicted RBP15.79■□□□□ 0.12
NUP54-205ENST00000507257 NPIPB13A6NJU9 1138 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 NPIPB4C9JG80 1138 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 WRBO00258 174 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 P2RY10O00398 339 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 TO15178 435 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 FBP1P09467 338 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 RPS2P15880 293 aaKnown RBP15.78■□□□□ 0.12
NUP54-205ENST00000507257 ST6GAL1P15907 406 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 HIST1H1DP16402 221 aaKnown RBP15.78■□□□□ 0.12
NUP54-205ENST00000507257 PGCP20142 388 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 EMP2P54851 167 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 SLC26A5P58743 744 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 YPEL5P62699 121 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 ZP2Q05996 745 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 SRSF5Q13243 272 aaKnown RBP15.78■□□□□ 0.12
NUP54-205ENST00000507257 ANKRD55Q3KP44 614 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 TANGO2Q6ICL3 276 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 C1QL4Q86Z23 238 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 BHLHE23Q8NDY6 225 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 OR5D14Q8NGL3 314 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 KLHDC3Q9BQ90 382 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 NXF5Q9H1B4 397 aaKnown RBP15.78■□□□□ 0.12
NUP54-205ENST00000507257 LMAN1LQ9HAT1 526 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 FAM206AQ9NX38 181 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 SRPK3Q9UPE1 567 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 FREM3P0C091 2139 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 SERPINA5P05154 406 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 CTSBP07858 339 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 GP1BBP13224 206 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 PRF1P14222 555 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 NME2P22392 152 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 EIF2S3P41091 472 aaKnown RBP15.78■□□□□ 0.12
NUP54-205ENST00000507257 POLR2HP52434 150 aaKnown RBP15.78■□□□□ 0.12
NUP54-205ENST00000507257 ZNF600Q6ZNG1 722 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 DCXRQ7Z4W1 244 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 C19orf47Q8N9M1 422 aaKnown RBP15.78■□□□□ 0.12
NUP54-205ENST00000507257 AKR1E2Q96JD6 320 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 ARV1Q9H2C2 271 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 TMPRSS5Q9H3S3 457 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 RPS10P5Q9NQ39 176 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.78■□□□□ 0.12
NUP54-205ENST00000507257 GHRLQ9UBU3 117 aa15.78■□□□□ 0.12
NUP54-205ENST00000507257 OSGIN2Q9Y236 505 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms