RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 CAPSLQ8WWF8 208 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 ASB10Q8WXI3 467 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 ACOT11Q8WXI4 607 aaPredicted RBP5.73□□□□□ -1.49
VCAN-207ENST00000507162 HDAC2Q92769 488 aaKnown RBP5.73□□□□□ -1.49
VCAN-207ENST00000507162 SEH1LQ96EE3 360 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 TMEM19Q96HH6 336 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 CDRT15Q96T59 188 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 TMEM43Q9BTV4 400 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.73□□□□□ -1.49
VCAN-207ENST00000507162 ZNF391Q9UJN7 358 aa5.73□□□□□ -1.49
VCAN-207ENST00000507162 TNCP24821 2201 aa5.72□□□□□ -1.49
VCAN-207ENST00000507162 A0A0B4J2E0 115 aa5.72□□□□□ -1.49
VCAN-207ENST00000507162 A0A1B0GX12 115 aa5.72□□□□□ -1.49
VCAN-207ENST00000507162 PSMB11A5LHX3 300 aa5.72□□□□□ -1.49
VCAN-207ENST00000507162 SH2D7A6NKC9 451 aaPredicted RBP5.72□□□□□ -1.49
VCAN-207ENST00000507162 CENPBD1B2RD01 187 aa5.72□□□□□ -1.49
VCAN-207ENST00000507162 RHBDL1O75783 438 aa5.72□□□□□ -1.49
VCAN-207ENST00000507162 KRT75O95678 551 aa5.72□□□□□ -1.49
VCAN-207ENST00000507162 TFF1P04155 84 aa5.72□□□□□ -1.49
VCAN-207ENST00000507162 CHRNGP07510 517 aa5.72□□□□□ -1.49
VCAN-207ENST00000507162 FGF4P08620 206 aa5.72□□□□□ -1.49
VCAN-207ENST00000507162 HCKP08631 526 aa5.72□□□□□ -1.49
VCAN-207ENST00000507162 JUNBP17275 347 aaPredicted RBP5.72□□□□□ -1.49
VCAN-207ENST00000507162 MSR1P21757 451 aa5.72□□□□□ -1.49
VCAN-207ENST00000507162 TGM4P49221 684 aa5.72□□□□□ -1.49
VCAN-207ENST00000507162 DAP3P51398 398 aaKnown RBP5.72□□□□□ -1.49
VCAN-207ENST00000507162 ERVFRD-1P60508 538 aa5.72□□□□□ -1.49
VCAN-207ENST00000507162 DSTNP60981 165 aa5.72□□□□□ -1.49
VCAN-207ENST00000507162 EMX2Q04743 252 aa5.72□□□□□ -1.49
VCAN-207ENST00000507162 SCRN3Q0VDG4 424 aa5.72□□□□□ -1.49
VCAN-207ENST00000507162 MAD2L1Q13257 205 aaPredicted RBP5.72□□□□□ -1.49
VCAN-207ENST00000507162 FAM27D1Q5T7N8 215 aa5.72□□□□□ -1.49
VCAN-207ENST00000507162 TEX36Q5VZQ5 186 aa5.72□□□□□ -1.49
VCAN-207ENST00000507162 HDDC2Q7Z4H3 204 aa5.72□□□□□ -1.49
VCAN-207ENST00000507162 SYT9Q86SS6 491 aa5.72□□□□□ -1.49
VCAN-207ENST00000507162 C10orf107Q8IVU9 208 aa5.72□□□□□ -1.49
VCAN-207ENST00000507162 FAM185AQ8N0U4 392 aa5.72□□□□□ -1.49
VCAN-207ENST00000507162 BCAS4Q8TDM0 211 aa5.72□□□□□ -1.49
VCAN-207ENST00000507162 TCP10LQ8TDR4 215 aa5.72□□□□□ -1.49
VCAN-207ENST00000507162 APOBEC3DQ96AK3 386 aaPredicted RBP5.72□□□□□ -1.49
VCAN-207ENST00000507162 RNFT2Q96EX2 444 aa5.72□□□□□ -1.49
VCAN-207ENST00000507162 RAX2Q96IS3 184 aa5.72□□□□□ -1.49
VCAN-207ENST00000507162 SEPHS2Q99611 448 aa5.72□□□□□ -1.49
VCAN-207ENST00000507162 INIPQ9NRY2 104 aa5.72□□□□□ -1.49
VCAN-207ENST00000507162 BTNL2Q9UIR0 455 aa5.72□□□□□ -1.49
VCAN-207ENST00000507162 NDUFAF1Q9Y375 327 aa5.72□□□□□ -1.49
VCAN-207ENST00000507162 GMNCA6NCL1 334 aa5.71□□□□□ -1.5
VCAN-207ENST00000507162 A6NHS1 94 aa5.71□□□□□ -1.5
VCAN-207ENST00000507162 TPST1O60507 370 aa5.71□□□□□ -1.5
VCAN-207ENST00000507162 ARG1P05089 322 aa5.71□□□□□ -1.5
VCAN-207ENST00000507162 MED14OSP0DP75 135 aa5.71□□□□□ -1.5
VCAN-207ENST00000507162 ETS2P15036 469 aa5.71□□□□□ -1.5
VCAN-207ENST00000507162 MUC1P15941 1255 aaPredicted RBP5.71□□□□□ -1.5
VCAN-207ENST00000507162 FSTP19883 344 aa5.71□□□□□ -1.5
VCAN-207ENST00000507162 BGNP21810 368 aa5.71□□□□□ -1.5
VCAN-207ENST00000507162 CDC25BP30305 580 aa5.71□□□□□ -1.5
VCAN-207ENST00000507162 AQP2P41181 271 aa5.71□□□□□ -1.5
VCAN-207ENST00000507162 NME5P56597 212 aa5.71□□□□□ -1.5
VCAN-207ENST00000507162 RPL18Q07020 188 aaKnown RBP5.71□□□□□ -1.5
VCAN-207ENST00000507162 TOP3AQ13472 1001 aaPredicted RBP5.71□□□□□ -1.5
VCAN-207ENST00000507162 OTPQ5XKR4 325 aa5.71□□□□□ -1.5
VCAN-207ENST00000507162 TTC33Q6PID6 262 aaPredicted RBP5.71□□□□□ -1.5
VCAN-207ENST00000507162 C16orf89Q6UX73 402 aa5.71□□□□□ -1.5
VCAN-207ENST00000507162 DHDDSQ86SQ9 333 aa5.71□□□□□ -1.5
VCAN-207ENST00000507162 ARMC8Q8IUR7 673 aa5.71□□□□□ -1.5
VCAN-207ENST00000507162 ZNF695Q8IW36 515 aa5.71□□□□□ -1.5
VCAN-207ENST00000507162 OSR2Q8N2R0 312 aa5.71□□□□□ -1.5
VCAN-207ENST00000507162 OR1F12Q8NHA8 337 aa5.71□□□□□ -1.5
VCAN-207ENST00000507162 BBS10Q8TAM1 723 aa5.71□□□□□ -1.5
VCAN-207ENST00000507162 LRRC29Q8WV35 223 aa5.71□□□□□ -1.5
VCAN-207ENST00000507162 SLC35B4Q969S0 331 aa5.71□□□□□ -1.5
VCAN-207ENST00000507162 SLCO4A1Q96BD0 722 aa5.71□□□□□ -1.5
VCAN-207ENST00000507162 NMD3Q96D46 503 aaKnown RBP5.71□□□□□ -1.5
VCAN-207ENST00000507162 PPP1R36Q96LQ0 422 aa5.71□□□□□ -1.5
VCAN-207ENST00000507162 ADAT1Q9BUB4 502 aaKnown RBP5.71□□□□□ -1.5
VCAN-207ENST00000507162 RAB17Q9H0T7 212 aa5.71□□□□□ -1.5
VCAN-207ENST00000507162 SMURF2Q9HAU4 748 aa5.71□□□□□ -1.5
VCAN-207ENST00000507162 ELL3Q9HB65 397 aaPredicted RBP5.71□□□□□ -1.5
VCAN-207ENST00000507162 SLCO1B3Q9NPD5 702 aa5.71□□□□□ -1.5
VCAN-207ENST00000507162 SNTG1Q9NSN8 517 aa5.71□□□□□ -1.5
VCAN-207ENST00000507162 PGPEP1Q9NXJ5 209 aa5.71□□□□□ -1.5
VCAN-207ENST00000507162 VNN3Q9NY84 501 aa5.71□□□□□ -1.5
VCAN-207ENST00000507162 STX18Q9P2W9 335 aaKnown RBP5.71□□□□□ -1.5
VCAN-207ENST00000507162 SLC25A10Q9UBX3 287 aaPredicted RBP5.71□□□□□ -1.5
VCAN-207ENST00000507162 HILPDAQ9Y5L2 63 aa5.71□□□□□ -1.5
VCAN-207ENST00000507162 SAR1BQ9Y6B6 198 aa5.71□□□□□ -1.5
VCAN-207ENST00000507162 A0A1B0GWJ7 208 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 TRIM64CA6NLI5 447 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 C5orf58C9J3I9 102 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 GMDSO60547 372 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 PLIN3O60664 434 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 TPST2O60704 377 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 DEDDO75618 318 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 ASAH2BP0C7U1 165 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 NR2C1P13056 603 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 AMY2BP19961 511 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 GGT2P36268 569 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 RGS8P57771 180 aaPredicted RBP5.7□□□□□ -1.5
VCAN-207ENST00000507162 OR12D2P58182 307 aa5.7□□□□□ -1.5
VCAN-207ENST00000507162 SLC34A1Q06495 639 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms