RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 GSDMAQ96QA5 445 aa1.34□□□□□ -2.19
GYPB-207ENST00000506679 C11orf70Q9BRQ4 267 aa1.34□□□□□ -2.19
GYPB-207ENST00000506679 CHCHD7Q9BUK0 85 aa1.34□□□□□ -2.19
GYPB-207ENST00000506679 TMEM38AQ9H6F2 299 aa1.34□□□□□ -2.19
GYPB-207ENST00000506679 ZNF442Q9H7R0 627 aa1.34□□□□□ -2.19
GYPB-207ENST00000506679 TMEM27Q9HBJ8 222 aa1.34□□□□□ -2.19
GYPB-207ENST00000506679 LYARQ9NX58 379 aaKnown RBP1.34□□□□□ -2.19
GYPB-207ENST00000506679 PDP1Q9P0J1 537 aaPredicted RBP1.34□□□□□ -2.19
GYPB-207ENST00000506679 PITPNC1Q9UKF7 332 aa1.34□□□□□ -2.19
GYPB-207ENST00000506679 SIGLEC7Q9Y286 467 aa1.34□□□□□ -2.19
GYPB-207ENST00000506679 ADGRL1O94910 1474 aa1.34□□□□□ -2.19
GYPB-207ENST00000506679 TICRRQ7Z2Z1 1910 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 IGHV3-49A0A0A0MS15 119 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 TMEM120BA0PK00 339 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 LRRIQ4A6NIV6 560 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 ZNF98A6NK75 572 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 BTNL10A8MVZ5 291 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 H0YIV9 168 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 H7C0C1 242 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 TNFRSF11BO00300 401 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 DNALI1O14645 258 aaPredicted RBP1.33□□□□□ -2.2
GYPB-207ENST00000506679 CASC3O15234 703 aaKnown RBP1.33□□□□□ -2.2
GYPB-207ENST00000506679 EIF1BO60739 113 aaKnown RBP1.33□□□□□ -2.2
GYPB-207ENST00000506679 HUS1O60921 280 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 CYB5R3P00387 301 aaPredicted RBP1.33□□□□□ -2.2
GYPB-207ENST00000506679 PAHP00439 452 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 IGKV4-1P06312 121 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 CD37P11049 281 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 ANXA8P13928 327 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 RAB4AP20338 218 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 BCKDHBP21953 392 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 CD34P28906 385 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 BMI1P35226 326 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 POLR2IP36954 125 aaKnown RBP1.33□□□□□ -2.2
GYPB-207ENST00000506679 EIF1P41567 113 aaKnown RBP1.33□□□□□ -2.2
GYPB-207ENST00000506679 ATP5OP48047 213 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 ZNF121P58317 390 aaPredicted RBP1.33□□□□□ -2.2
GYPB-207ENST00000506679 FUT5Q11128 374 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 PNOCQ13519 176 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 DGCR6Q14129 220 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 RBMY1FQ15415 496 aaKnown RBP1.33□□□□□ -2.2
GYPB-207ENST00000506679 ALKBH6Q3KRA9 238 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 TPTE2P1Q5T6R2 138 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 ANXA8L1Q5VT79 327 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 EIF3MQ7L2H7 374 aaKnown RBP1.33□□□□□ -2.2
GYPB-207ENST00000506679 GABRG1Q8N1C3 465 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 COMMD1Q8N668 190 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 BBOF1Q8ND07 529 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 OR9G4Q8NGQ1 327 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 OR6Q1Q8NGQ2 317 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 NRGNQ92686 78 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 C8orf44Q96CB5 159 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 ECHDC3Q96DC8 303 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 BTN2A3PQ96KV6 586 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 FRMD8P1Q9BZ68 369 aaPredicted RBP1.33□□□□□ -2.2
GYPB-207ENST00000506679 IQCGQ9H095 443 aaKnown RBP1.33□□□□□ -2.2
GYPB-207ENST00000506679 LHX5Q9H2C1 402 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 AUNIPQ9H7T9 357 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 GEMIN7Q9H840 131 aaKnown RBP1.33□□□□□ -2.2
GYPB-207ENST00000506679 RETNQ9HD89 108 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 CLN6Q9NWW5 311 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 C21orf62Q9NYP8 219 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 GCNT4Q9P109 453 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 DHCR7Q9UBM7 475 aaKnown RBP1.33□□□□□ -2.2
GYPB-207ENST00000506679 ZNF229Q9UJW7 825 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 SAR1BQ9Y6B6 198 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 COMMD3-BMI1R4GMX3 469 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 PCDH11XQ9BZA7 1347 aa1.33□□□□□ -2.2
GYPB-207ENST00000506679 THADAQ6YHU6 1953 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 IGKV1-27A0A075B6S5 117 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 SMIM26A0A096LP01 95 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 IGHV1-3A0A0C4DH29 117 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 CDC40O60508 579 aaKnown RBP eCLIP1.32□□□□□ -2.2
GYPB-207ENST00000506679 NMT2O60551 498 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 CTAG2O75638 210 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 CD160O95971 181 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 HPRT1P00492 218 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 ERCC1P07992 297 aaPredicted RBP1.32□□□□□ -2.2
GYPB-207ENST00000506679 FGF4P08620 206 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 MYL2P10916 166 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 CTRB1P17538 263 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 CSNK2A2P19784 350 aaPredicted RBP1.32□□□□□ -2.2
GYPB-207ENST00000506679 USF1P22415 310 aaPredicted RBP1.32□□□□□ -2.2
GYPB-207ENST00000506679 IL32P24001 234 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 STOMP27105 288 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 PSMB5P28074 263 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 GTF2E2P29084 291 aaKnown RBP1.32□□□□□ -2.2
GYPB-207ENST00000506679 HMOX2P30519 316 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 CD70P32970 193 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 MAGEA1P43355 309 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 MEF2BQ02080 365 aaPredicted RBP1.32□□□□□ -2.2
GYPB-207ENST00000506679 GBE1Q04446 702 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 IL15RAQ13261 267 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 NCF4Q15080 339 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 KRTAP6-3Q3LI67 103 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 YIF1BQ5BJH7 314 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 BEX5Q5H9J7 111 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 TWF2Q6IBS0 349 aaKnown RBP1.32□□□□□ -2.2
GYPB-207ENST00000506679 TMEM220Q6QAJ8 160 aa1.32□□□□□ -2.2
GYPB-207ENST00000506679 SPESP1Q6UW49 350 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms