RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 CLN8Q9UBY8 286 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 HMGXB4Q9UGU5 601 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 ING4Q9UNL4 249 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 NEUROG3Q9Y4Z2 214 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 CDH10Q9Y6N8 788 aa2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 GCN1Q92616 2671 aaKnown RBP2.32□□□□□ -2.04
TRAPPC11-205ENST00000506426 DSPP15924 2871 aaKnown RBP2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 IGSF10Q6WRI0 2623 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 MIA3Q5JRA6 1907 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 KCNE1BA0A087WTH5 132 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 IGKV3D-20A0A0C4DH25 116 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 PSMB11A5LHX3 300 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 USP27XA6NNY8 438 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 A8MUA0 341 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 LAD1O00515 517 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 SLC31A2O15432 143 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 EIF4E2O60573 245 aaKnown RBP2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 CLPXO76031 633 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 SUPT7LO94864 414 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 CCNB2O95067 398 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 SERPINA5P05154 406 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 CHTF8P0CG12 524 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 GABRG2P18507 467 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 MSR1P21757 451 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 ZBTB25P24278 435 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 CD1BP29016 333 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 HOXA6P31267 233 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 BTCP35070 178 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 P2RY2P41231 377 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 RORCP51449 518 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 STX17P56962 302 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 ACTA2P62736 377 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 ACTG2P63267 376 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 ACTC1P68032 377 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 ACTA1P68133 377 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 GTF2BQ00403 316 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 ILKQ13418 452 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 PDGFRLQ15198 375 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 STUMQ69YW2 141 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 RNF165Q6ZSG1 346 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 RFLNAQ6ZTI6 216 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 ZNF720Q7Z2F6 126 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 THOC6Q86W42 341 aaKnown RBP2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 BBS7Q8IWZ6 715 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 CMTM1Q8IZ96 169 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 ZADH2Q8N4Q0 377 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 CSGALNACT2Q8N6G5 542 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 ZNF321PQ8N8H1 164 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 TTC29Q8NA56 475 aaPredicted RBP2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 HSD17B11Q8NBQ5 300 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 LYPD6BQ8NI32 183 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 NEIL3Q8TAT5 605 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 GPX8Q8TED1 209 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 CAPSLQ8WWF8 208 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 DCUN1D4Q92564 292 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 ZNF75CPQ92670 426 aaPredicted RBP2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 TMEM54Q969K7 222 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 RPUSD4Q96CM3 377 aaKnown RBP2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 DNAJC19Q96DA6 116 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 PIK3IP1Q96FE7 263 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 XPO6Q96QU8 1125 aaKnown RBP2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 TIPINQ9BVW5 301 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 OSBPL10Q9BXB5 764 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 OR11A1Q9GZK7 315 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 SRMSQ9H3Y6 488 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 ASB7Q9H672 318 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 LYRM4Q9HD34 91 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 FAM49BQ9NUQ9 324 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 MTRF1LQ9UGC7 380 aaKnown RBP2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 LGALS13Q9UHV8 139 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 SLC17A4Q9Y2C5 497 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 LOC400499M0QZD8 3231 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 APC2O95996 2303 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 MAST4O15021 2626 aa2.31□□□□□ -2.04
TRAPPC11-205ENST00000506426 FANCMQ8IYD8 2048 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 ZNF462Q96JM2 2506 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 HECTD1Q9ULT8 2610 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 A0A0B4J2A0 478 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 IGHV1OR15-9A0A0B4J2B8 117 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 A0A0G2JLM5 398 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 A0A0G2JN53 185 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 GLYATL1P3A0A0U1RQE8 302 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 FAM231BA6NCW3 169 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 ZNF726A6NNF4 738 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 M0R3G1 203 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 HAT1O14929 419 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 COCHO43405 550 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 TNNC2P02585 160 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 PRB1P04280 392 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 APODP05090 189 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 PLEKP08567 350 aaPredicted RBP2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 GIPP09681 153 aaPredicted RBP2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 CSF3P09919 207 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 GKN3PP0CG01 181 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 HLA-EP13747 358 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 ZNF250P15622 560 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 KLK2P20151 261 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 CSRP1P21291 193 aaKnown RBP2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 WARSP23381 471 aaKnown RBP2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 LONP1P36776 959 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms