RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 SLC26A10Q8NG04 563 aa17.5■□□□□ 0.39
SQSTM1-210ENST00000506042 MCUR1Q96AQ8 359 aa17.5■□□□□ 0.39
SQSTM1-210ENST00000506042 ZNF799Q96GE5 643 aa17.5■□□□□ 0.39
SQSTM1-210ENST00000506042 WDFY2Q96P53 400 aa17.5■□□□□ 0.39
SQSTM1-210ENST00000506042 IFT27Q9BW83 186 aa17.5■□□□□ 0.39
SQSTM1-210ENST00000506042 TMCC3Q9ULS5 477 aa17.5■□□□□ 0.39
SQSTM1-210ENST00000506042 RNF114Q9Y508 228 aa17.5■□□□□ 0.39
SQSTM1-210ENST00000506042 hCG_1807616A0A1W2PRN6 198 aa17.49■□□□□ 0.39
SQSTM1-210ENST00000506042 OOEPA6NGQ2 149 aa17.49■□□□□ 0.39
SQSTM1-210ENST00000506042 PPP1R3DO95685 299 aa17.49■□□□□ 0.39
SQSTM1-210ENST00000506042 MELTFP08582 738 aa17.49■□□□□ 0.39
SQSTM1-210ENST00000506042 OMPP47874 163 aa17.49■□□□□ 0.39
SQSTM1-210ENST00000506042 TAF13Q15543 124 aa17.49■□□□□ 0.39
SQSTM1-210ENST00000506042 SNCBQ16143 134 aa17.49■□□□□ 0.39
SQSTM1-210ENST00000506042 SLC18B1Q6NT16 456 aa17.49■□□□□ 0.39
SQSTM1-210ENST00000506042 RPL13AP3Q6NVV1 102 aa17.49■□□□□ 0.39
SQSTM1-210ENST00000506042 TSEN54Q7Z6J9 526 aaKnown RBP17.49■□□□□ 0.39
SQSTM1-210ENST00000506042 OR52L1Q8NGH7 329 aa17.49■□□□□ 0.39
SQSTM1-210ENST00000506042 CHIAQ9BZP6 476 aa17.49■□□□□ 0.39
SQSTM1-210ENST00000506042 SP140LQ9H930 580 aa17.49■□□□□ 0.39
SQSTM1-210ENST00000506042 RPRD1BQ9NQG5 326 aaKnown RBP17.49■□□□□ 0.39
SQSTM1-210ENST00000506042 C1RLQ9NZP8 487 aa17.49■□□□□ 0.39
SQSTM1-210ENST00000506042 MRPL15Q9P015 296 aaKnown RBP17.49■□□□□ 0.39
SQSTM1-210ENST00000506042 IGLV1-36A0A0B4J1U3 117 aa17.48■□□□□ 0.39
SQSTM1-210ENST00000506042 GADD45GO95257 159 aa17.48■□□□□ 0.39
SQSTM1-210ENST00000506042 COX4I1P13073 169 aa17.48■□□□□ 0.39
SQSTM1-210ENST00000506042 ZNF26P17031 533 aaPredicted RBP17.48■□□□□ 0.39
SQSTM1-210ENST00000506042 CA6P23280 308 aa17.48■□□□□ 0.39
SQSTM1-210ENST00000506042 DDOSTP39656 456 aa17.48■□□□□ 0.39
SQSTM1-210ENST00000506042 GSK3BP49841 420 aa17.48■□□□□ 0.39
SQSTM1-210ENST00000506042 HNRNPA0Q13151 305 aaKnown RBP17.48■□□□□ 0.39
SQSTM1-210ENST00000506042 MAB21L1Q13394 359 aa17.48■□□□□ 0.39
SQSTM1-210ENST00000506042 MEP1BQ16820 701 aa17.48■□□□□ 0.39
SQSTM1-210ENST00000506042 RFX4Q33E94 735 aa17.48■□□□□ 0.39
SQSTM1-210ENST00000506042 DRAM2Q6UX65 266 aa17.48■□□□□ 0.39
SQSTM1-210ENST00000506042 LYPD2Q6UXB3 125 aa17.48■□□□□ 0.39
SQSTM1-210ENST00000506042 HACD2Q6Y1H2 254 aa17.48■□□□□ 0.39
SQSTM1-210ENST00000506042 NPRL2Q8WTW4 380 aa17.48■□□□□ 0.39
SQSTM1-210ENST00000506042 DMRTB1Q96MA1 342 aa17.48■□□□□ 0.39
SQSTM1-210ENST00000506042 NMNAT3Q96T66 252 aa17.48■□□□□ 0.39
SQSTM1-210ENST00000506042 CITED1Q99966 193 aa17.48■□□□□ 0.39
SQSTM1-210ENST00000506042 IGHV1-69DA0A0B4J2H0 117 aa17.47■□□□□ 0.39
SQSTM1-210ENST00000506042 A0A1B0GVI7 797 aa17.47■□□□□ 0.39
SQSTM1-210ENST00000506042 CD300LBA8K4G0 201 aa17.47■□□□□ 0.39
SQSTM1-210ENST00000506042 IGHV1-69P01742 117 aa17.47■□□□□ 0.39
SQSTM1-210ENST00000506042 EEF1B2P24534 225 aaKnown RBP17.47■□□□□ 0.39
SQSTM1-210ENST00000506042 NUDT2P50583 147 aa17.47■□□□□ 0.39
SQSTM1-210ENST00000506042 GUCA2AQ02747 115 aa17.47■□□□□ 0.39
SQSTM1-210ENST00000506042 TAF9Q16594 264 aa17.47■□□□□ 0.39
SQSTM1-210ENST00000506042 FAM201AQ5SY85 155 aa17.47■□□□□ 0.39
SQSTM1-210ENST00000506042 PRAMEF6Q5VXH4 476 aa17.47■□□□□ 0.39
SQSTM1-210ENST00000506042 OTPQ5XKR4 325 aa17.47■□□□□ 0.39
SQSTM1-210ENST00000506042 ZNF841Q6ZN19 808 aa17.47■□□□□ 0.39
SQSTM1-210ENST00000506042 SLC36A1Q7Z2H8 476 aa17.47■□□□□ 0.39
SQSTM1-210ENST00000506042 ZBTB46Q86UZ6 589 aa17.47■□□□□ 0.39
SQSTM1-210ENST00000506042 LINC00346Q8IVM7 164 aa17.47■□□□□ 0.39
SQSTM1-210ENST00000506042 OR6V1Q8N148 313 aa17.47■□□□□ 0.39
SQSTM1-210ENST00000506042 FTMTQ8N4E7 242 aa17.47■□□□□ 0.39
SQSTM1-210ENST00000506042 OR2T4Q8NH00 348 aa17.47■□□□□ 0.39
SQSTM1-210ENST00000506042 OR8S1Q8NH09 359 aa17.47■□□□□ 0.39
SQSTM1-210ENST00000506042 CMTM5Q96DZ9 223 aa17.47■□□□□ 0.39
SQSTM1-210ENST00000506042 TSSK2Q96PF2 358 aa17.47■□□□□ 0.39
SQSTM1-210ENST00000506042 OR52D1Q9H346 318 aa17.47■□□□□ 0.39
SQSTM1-210ENST00000506042 NDUFAF4Q9P032 175 aa17.47■□□□□ 0.39
SQSTM1-210ENST00000506042 CYB5R1Q9UHQ9 305 aa17.47■□□□□ 0.39
SQSTM1-210ENST00000506042 ANKRD30BLA7E2S9 258 aa17.46■□□□□ 0.39
SQSTM1-210ENST00000506042 C22orf46C9J442 243 aa17.46■□□□□ 0.39
SQSTM1-210ENST00000506042 C3orf80F5H4A9 247 aa17.46■□□□□ 0.39
SQSTM1-210ENST00000506042 NME4O00746 187 aa17.46■□□□□ 0.39
SQSTM1-210ENST00000506042 BHLHE40O14503 412 aa17.46■□□□□ 0.39
SQSTM1-210ENST00000506042 GPR37O15354 613 aa17.46■□□□□ 0.39
SQSTM1-210ENST00000506042 XRCC2O43543 280 aa17.46■□□□□ 0.39
SQSTM1-210ENST00000506042 OR10H3O60404 316 aa17.46■□□□□ 0.39
SQSTM1-210ENST00000506042 FBP1P09467 338 aa17.46■□□□□ 0.39
SQSTM1-210ENST00000506042 MICBQ29980 383 aa17.46■□□□□ 0.39
SQSTM1-210ENST00000506042 CLEC12AQ5QGZ9 265 aa17.46■□□□□ 0.39
SQSTM1-210ENST00000506042 SFRP4Q6FHJ7 346 aaPredicted RBP17.46■□□□□ 0.39
SQSTM1-210ENST00000506042 CFAP77Q6ZQR2 320 aa17.46■□□□□ 0.39
SQSTM1-210ENST00000506042 OR4K13Q8NH42 304 aa17.46■□□□□ 0.39
SQSTM1-210ENST00000506042 OR52J3Q8NH60 311 aa17.46■□□□□ 0.39
SQSTM1-210ENST00000506042 LHX4Q969G2 390 aa17.46■□□□□ 0.39
SQSTM1-210ENST00000506042 TCF7L1Q9HCS4 588 aa17.46■□□□□ 0.39
SQSTM1-210ENST00000506042 SPAG4Q9NPE6 437 aa17.46■□□□□ 0.39
SQSTM1-210ENST00000506042 ARMCX1Q9P291 453 aa17.46■□□□□ 0.39
SQSTM1-210ENST00000506042 KPTNQ9Y664 436 aa17.46■□□□□ 0.39
SQSTM1-210ENST00000506042 CENPVL3A0A0U1RRI6 287 aa17.45■□□□□ 0.38
SQSTM1-210ENST00000506042 TIPRLO75663 272 aa17.45■□□□□ 0.38
SQSTM1-210ENST00000506042 APOC1P02654 83 aa17.45■□□□□ 0.38
SQSTM1-210ENST00000506042 SFTPBP07988 381 aa17.45■□□□□ 0.38
SQSTM1-210ENST00000506042 PMELP40967 661 aa17.45■□□□□ 0.38
SQSTM1-210ENST00000506042 NAA10P41227 235 aaPredicted RBP17.45■□□□□ 0.38
SQSTM1-210ENST00000506042 SLC15A1P46059 708 aa17.45■□□□□ 0.38
SQSTM1-210ENST00000506042 SPIBQ01892 262 aa17.45■□□□□ 0.38
SQSTM1-210ENST00000506042 C2orf68Q2NKX9 166 aa17.45■□□□□ 0.38
SQSTM1-210ENST00000506042 RUSC1-AS1Q66K80 236 aa17.45■□□□□ 0.38
SQSTM1-210ENST00000506042 GLYATQ6IB77 296 aa17.45■□□□□ 0.38
SQSTM1-210ENST00000506042 DTX3Q8N9I9 347 aa17.45■□□□□ 0.38
SQSTM1-210ENST00000506042 PROKR2Q8NFJ6 384 aa17.45■□□□□ 0.38
SQSTM1-210ENST00000506042 COPS4Q9BT78 406 aa17.45■□□□□ 0.38
SQSTM1-210ENST00000506042 C1orf123Q9NWV4 160 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms