RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 LINC01590Q5TEZ4 76 aa10.96□□□□□ -0.65
DDX41-204ENST00000504807 LCN8Q6JVE9 175 aa10.96□□□□□ -0.65
DDX41-204ENST00000504807 PGM2L1Q6PCE3 622 aa10.96□□□□□ -0.65
DDX41-204ENST00000504807 ZNF841Q6ZN19 808 aa10.96□□□□□ -0.65
DDX41-204ENST00000504807 RASSF6Q6ZTQ3 369 aa10.96□□□□□ -0.65
DDX41-204ENST00000504807 KLBQ86Z14 1044 aa10.96□□□□□ -0.65
DDX41-204ENST00000504807 LNX2Q8N448 690 aa10.96□□□□□ -0.65
DDX41-204ENST00000504807 KLHL36Q8N4N3 616 aa10.96□□□□□ -0.65
DDX41-204ENST00000504807 SPICQ8N5J4 248 aa10.96□□□□□ -0.65
DDX41-204ENST00000504807 IQCF1Q8N6M8 205 aa10.96□□□□□ -0.65
DDX41-204ENST00000504807 OR13G1Q8NGZ3 307 aa10.96□□□□□ -0.65
DDX41-204ENST00000504807 COG8Q96MW5 612 aa10.96□□□□□ -0.65
DDX41-204ENST00000504807 CCT8L2Q96SF2 557 aa10.96□□□□□ -0.65
DDX41-204ENST00000504807 CDADC1Q9BWV3 514 aa10.96□□□□□ -0.65
DDX41-204ENST00000504807 TSSK6Q9BXA6 273 aa10.96□□□□□ -0.65
DDX41-204ENST00000504807 DDX28Q9NUL7 540 aaKnown RBP10.96□□□□□ -0.65
DDX41-204ENST00000504807 CTSZQ9UBR2 303 aa10.96□□□□□ -0.65
DDX41-204ENST00000504807 PPIAL4AQ9Y536 164 aa10.96□□□□□ -0.65
DDX41-204ENST00000504807 MDFIC2A0A1B0GVS7 189 aa10.95□□□□□ -0.66
DDX41-204ENST00000504807 FAM183AA6NL82 134 aa10.95□□□□□ -0.66
DDX41-204ENST00000504807 M0R135 149 aa10.95□□□□□ -0.66
DDX41-204ENST00000504807 ACOT8O14734 319 aa10.95□□□□□ -0.66
DDX41-204ENST00000504807 FAM20BO75063 409 aa10.95□□□□□ -0.66
DDX41-204ENST00000504807 DCTN3O75935 186 aa10.95□□□□□ -0.66
DDX41-204ENST00000504807 CCNB2O95067 398 aa10.95□□□□□ -0.66
DDX41-204ENST00000504807 HKR1P10072 659 aa10.95□□□□□ -0.66
DDX41-204ENST00000504807 SPI1P17947 270 aa10.95□□□□□ -0.66
DDX41-204ENST00000504807 CA6P23280 308 aa10.95□□□□□ -0.66
DDX41-204ENST00000504807 GATA3P23771 443 aa10.95□□□□□ -0.66
DDX41-204ENST00000504807 PAX8Q06710 450 aa10.95□□□□□ -0.66
DDX41-204ENST00000504807 PCK2Q16822 640 aa10.95□□□□□ -0.66
DDX41-204ENST00000504807 SPATC1Q76KD6 591 aa10.95□□□□□ -0.66
DDX41-204ENST00000504807 DCXRQ7Z4W1 244 aa10.95□□□□□ -0.66
DDX41-204ENST00000504807 WDR86Q86TI4 376 aa10.95□□□□□ -0.66
DDX41-204ENST00000504807 PROKR2Q8NFJ6 384 aa10.95□□□□□ -0.66
DDX41-204ENST00000504807 ZNF799Q96GE5 643 aa10.95□□□□□ -0.66
DDX41-204ENST00000504807 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.95□□□□□ -0.66
DDX41-204ENST00000504807 UFSP2Q9NUQ7 469 aa10.95□□□□□ -0.66
DDX41-204ENST00000504807 TBC1D23Q9NUY8 699 aa10.95□□□□□ -0.66
DDX41-204ENST00000504807 TMEM100Q9NV29 134 aa10.95□□□□□ -0.66
DDX41-204ENST00000504807 ZNF319Q9P2F9 582 aa10.95□□□□□ -0.66
DDX41-204ENST00000504807 AUP1Q9Y679 476 aa10.95□□□□□ -0.66
DDX41-204ENST00000504807 WNK2Q9Y3S1 2297 aa10.95□□□□□ -0.66
DDX41-204ENST00000504807 CD300LBA8K4G0 201 aa10.94□□□□□ -0.66
DDX41-204ENST00000504807 C22orf46C9J442 243 aa10.94□□□□□ -0.66
DDX41-204ENST00000504807 TNFRSF13BO14836 293 aaPredicted RBP10.94□□□□□ -0.66
DDX41-204ENST00000504807 SURF4O15260 269 aa10.94□□□□□ -0.66
DDX41-204ENST00000504807 KRT36O76013 467 aa10.94□□□□□ -0.66
DDX41-204ENST00000504807 SPARCP09486 303 aa10.94□□□□□ -0.66
DDX41-204ENST00000504807 IFNGR2P38484 337 aa10.94□□□□□ -0.66
DDX41-204ENST00000504807 CD200P41217 278 aa10.94□□□□□ -0.66
DDX41-204ENST00000504807 GATA4P43694 442 aa10.94□□□□□ -0.66
DDX41-204ENST00000504807 SRP9P49458 86 aaKnown RBP10.94□□□□□ -0.66
DDX41-204ENST00000504807 PRKXP51817 358 aa10.94□□□□□ -0.66
DDX41-204ENST00000504807 ZNF181Q2M3W8 571 aa10.94□□□□□ -0.66
DDX41-204ENST00000504807 SLC36A3Q495N2 470 aa10.94□□□□□ -0.66
DDX41-204ENST00000504807 KLHL12Q53G59 568 aa10.94□□□□□ -0.66
DDX41-204ENST00000504807 OR2T5Q6IEZ7 315 aa10.94□□□□□ -0.66
DDX41-204ENST00000504807 ZNF826PQ6ZT77 177 aa10.94□□□□□ -0.66
DDX41-204ENST00000504807 PRSS45Q7RTY3 260 aa10.94□□□□□ -0.66
DDX41-204ENST00000504807 C1QL4Q86Z23 238 aa10.94□□□□□ -0.66
DDX41-204ENST00000504807 ADGRG5Q8IZF4 528 aa10.94□□□□□ -0.66
DDX41-204ENST00000504807 HS3ST5Q8IZT8 346 aa10.94□□□□□ -0.66
DDX41-204ENST00000504807 FGFRL1Q8N441 504 aa10.94□□□□□ -0.66
DDX41-204ENST00000504807 OR5L1Q8NGL2 311 aa10.94□□□□□ -0.66
DDX41-204ENST00000504807 OR2AJ1Q8NGZ0 328 aa10.94□□□□□ -0.66
DDX41-204ENST00000504807 OR2T29Q8NH02 315 aa10.94□□□□□ -0.66
DDX41-204ENST00000504807 NSL1Q96IY1 281 aa10.94□□□□□ -0.66
DDX41-204ENST00000504807 SSBP3Q9BWW4 388 aaPredicted RBP10.94□□□□□ -0.66
DDX41-204ENST00000504807 IGHV2-70DA0A0C4DH43 119 aa10.93□□□□□ -0.66
DDX41-204ENST00000504807 A0A1B0GW55 424 aa10.93□□□□□ -0.66
DDX41-204ENST00000504807 DHRS12A0PJE2 317 aa10.93□□□□□ -0.66
DDX41-204ENST00000504807 DNAJC9-AS1A6NH13 148 aa10.93□□□□□ -0.66
DDX41-204ENST00000504807 PTBP3O95758 552 aaKnown RBP10.93□□□□□ -0.66
DDX41-204ENST00000504807 DUX4L2P0CJ85 424 aa10.93□□□□□ -0.66
DDX41-204ENST00000504807 DUX4L3P0CJ86 424 aa10.93□□□□□ -0.66
DDX41-204ENST00000504807 DUX4L4P0CJ87 422 aa10.93□□□□□ -0.66
DDX41-204ENST00000504807 DUX4L5P0CJ88 424 aa10.93□□□□□ -0.66
DDX41-204ENST00000504807 DUX4L6P0CJ89 424 aa10.93□□□□□ -0.66
DDX41-204ENST00000504807 DUX4L7P0CJ90 424 aa10.93□□□□□ -0.66
DDX41-204ENST00000504807 RPS2P15880 293 aaKnown RBP10.93□□□□□ -0.66
DDX41-204ENST00000504807 ECH1Q13011 328 aa10.93□□□□□ -0.66
DDX41-204ENST00000504807 TRIM25Q14258 630 aaKnown RBP10.93□□□□□ -0.66
DDX41-204ENST00000504807 MICAQ29983 383 aa10.93□□□□□ -0.66
DDX41-204ENST00000504807 SPATS1Q496A3 300 aa10.93□□□□□ -0.66
DDX41-204ENST00000504807 ESCO2Q56NI9 601 aa10.93□□□□□ -0.66
DDX41-204ENST00000504807 SLC27A4Q6P1M0 643 aa10.93□□□□□ -0.66
DDX41-204ENST00000504807 DUX4L9Q6RFH8 374 aaPredicted RBP10.93□□□□□ -0.66
DDX41-204ENST00000504807 PGAP1Q75T13 922 aa10.93□□□□□ -0.66
DDX41-204ENST00000504807 BPIFB2Q8N4F0 458 aa10.93□□□□□ -0.66
DDX41-204ENST00000504807 OR52L1Q8NGH7 329 aa10.93□□□□□ -0.66
DDX41-204ENST00000504807 OR2T4Q8NH00 348 aa10.93□□□□□ -0.66
DDX41-204ENST00000504807 Q8TCH9 128 aa10.93□□□□□ -0.66
DDX41-204ENST00000504807 POP5Q969H6 163 aaKnown RBP10.93□□□□□ -0.66
DDX41-204ENST00000504807 CCDC124Q96CT7 223 aaKnown RBP10.93□□□□□ -0.66
DDX41-204ENST00000504807 SLAMF6Q96DU3 332 aa10.93□□□□□ -0.66
DDX41-204ENST00000504807 SUCNR1Q9BXA5 334 aa10.93□□□□□ -0.66
DDX41-204ENST00000504807 DGCR6LQ9BY27 220 aa10.93□□□□□ -0.66
DDX41-204ENST00000504807 MAGIXQ9H6Y5 334 aa10.93□□□□□ -0.66
DDX41-204ENST00000504807 SMURF1Q9HCE7 757 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms