RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 PRSS48Q7RTY5 328 aa4.23□□□□□ -1.73
LMNB1-208ENST00000504788 CATSPERDQ86XM0 798 aa4.23□□□□□ -1.73
LMNB1-208ENST00000504788 KRTAP1-3Q8IUG1 177 aa4.23□□□□□ -1.73
LMNB1-208ENST00000504788 ELMOD2Q8IZ81 293 aa4.23□□□□□ -1.73
LMNB1-208ENST00000504788 SPARTQ8N0X7 666 aa4.23□□□□□ -1.73
LMNB1-208ENST00000504788 OR10H4Q8NGA5 316 aa4.23□□□□□ -1.73
LMNB1-208ENST00000504788 OR10H5Q8NGA6 315 aa4.23□□□□□ -1.73
LMNB1-208ENST00000504788 OR8B12Q8NGG6 310 aa4.23□□□□□ -1.73
LMNB1-208ENST00000504788 OR2G2Q8NGZ5 317 aa4.23□□□□□ -1.73
LMNB1-208ENST00000504788 OR10AC1Q8NH08 325 aa4.23□□□□□ -1.73
LMNB1-208ENST00000504788 OR52N1Q8NH53 320 aa4.23□□□□□ -1.73
LMNB1-208ENST00000504788 OR2AE1Q8NHA4 323 aa4.23□□□□□ -1.73
LMNB1-208ENST00000504788 SLC25A40Q8TBP6 338 aa4.23□□□□□ -1.73
LMNB1-208ENST00000504788 MRPL24Q96A35 216 aaKnown RBP4.23□□□□□ -1.73
LMNB1-208ENST00000504788 TMEM80Q96HE8 168 aa4.23□□□□□ -1.73
LMNB1-208ENST00000504788 C4orf36Q96KX1 117 aa4.23□□□□□ -1.73
LMNB1-208ENST00000504788 COPS4Q9BT78 406 aa4.23□□□□□ -1.73
LMNB1-208ENST00000504788 ALG8Q9BVK2 526 aa4.23□□□□□ -1.73
LMNB1-208ENST00000504788 CDADC1Q9BWV3 514 aa4.23□□□□□ -1.73
LMNB1-208ENST00000504788 MRPL37Q9BZE1 423 aaKnown RBP4.23□□□□□ -1.73
LMNB1-208ENST00000504788 OR2J1Q9GZK6 312 aa4.23□□□□□ -1.73
LMNB1-208ENST00000504788 CLEC4MQ9H2X3 399 aaPredicted RBP4.23□□□□□ -1.73
LMNB1-208ENST00000504788 PLK3Q9H4B4 646 aa4.23□□□□□ -1.73
LMNB1-208ENST00000504788 PPP1R3EQ9H7J1 279 aa4.23□□□□□ -1.73
LMNB1-208ENST00000504788 NIPAL2Q9H841 368 aa4.23□□□□□ -1.73
LMNB1-208ENST00000504788 RNF121Q9H920 327 aa4.23□□□□□ -1.73
LMNB1-208ENST00000504788 NGBQ9NPG2 151 aa4.23□□□□□ -1.73
LMNB1-208ENST00000504788 H2AFY2Q9P0M6 372 aaPredicted RBP4.23□□□□□ -1.73
LMNB1-208ENST00000504788 LRCH1Q9Y2L9 728 aa4.23□□□□□ -1.73
LMNB1-208ENST00000504788 CAB39Q9Y376 341 aaPredicted RBP4.23□□□□□ -1.73
LMNB1-208ENST00000504788 SF3B6Q9Y3B4 125 aaKnown RBP4.23□□□□□ -1.73
LMNB1-208ENST00000504788 GRIP1Q9Y3R0 1128 aa4.23□□□□□ -1.73
LMNB1-208ENST00000504788 ZFHX3Q15911 3703 aa4.23□□□□□ -1.73
LMNB1-208ENST00000504788 ABCA2Q9BZC7 2435 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 MYO9AB2RTY4 2548 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 ITPR3Q14573 2671 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 IQCMA0A1B0GVH7 501 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 EFCAB10A6NFE3 127 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 METTL15A6NJ78 407 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 ACOD1A6NK06 481 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 SNTNA6NMZ2 147 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 HS3ST1O14792 307 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 PHYHO14832 338 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 ZFPL1O95159 310 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 PTBP3O95758 552 aaKnown RBP4.22□□□□□ -1.73
LMNB1-208ENST00000504788 ISG15P05161 165 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 CD3EP07766 207 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 ADH4P08319 380 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 SMIM18P0DKX4 95 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 SNRPBP14678 240 aaKnown RBP4.22□□□□□ -1.73
LMNB1-208ENST00000504788 COX6B1P14854 86 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 PAX1P15863 534 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 KITLGP21583 273 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 APLNRP35414 380 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 GUCA1AP43080 201 aaPredicted RBP4.22□□□□□ -1.73
LMNB1-208ENST00000504788 CX3CR1P49238 355 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 EVX1P49640 407 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 GDI2P50395 445 aaKnown RBP4.22□□□□□ -1.73
LMNB1-208ENST00000504788 CCR9P51686 369 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 GP2P55259 537 aaKnown RBP4.22□□□□□ -1.73
LMNB1-208ENST00000504788 CDH15P55291 814 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 PPP1CBP62140 327 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 FAM3AP98173 230 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 GALK2Q01415 458 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 PLP2Q04941 152 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 HLXQ14774 488 aaPredicted RBP4.22□□□□□ -1.73
LMNB1-208ENST00000504788 TBCEQ15813 527 aaPredicted RBP4.22□□□□□ -1.73
LMNB1-208ENST00000504788 KCTD21Q4G0X4 260 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 GLYATL3Q5SZD4 288 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 TMEM42Q69YG0 159 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 ZNF544Q6NX49 715 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 KCTD20Q7Z5Y7 419 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 ZNF540Q8NDQ6 660 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 OR51A4Q8NGJ6 313 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 OR2AJ1Q8NGZ0 328 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 SPRYD4Q8WW59 207 aaPredicted RBP4.22□□□□□ -1.73
LMNB1-208ENST00000504788 IPCEF1Q8WWN9 437 aaPredicted RBP4.22□□□□□ -1.73
LMNB1-208ENST00000504788 AKAP1Q92667 903 aaKnown RBP eCLIP4.22□□□□□ -1.73
LMNB1-208ENST00000504788 APOBEC3DQ96AK3 386 aaPredicted RBP4.22□□□□□ -1.73
LMNB1-208ENST00000504788 HAVCR1Q96D42 359 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 TRAF4Q9BUZ4 470 aaPredicted RBP4.22□□□□□ -1.73
LMNB1-208ENST00000504788 MROQ9BYG7 248 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 YTHDF1Q9BYJ9 559 aaKnown RBP4.22□□□□□ -1.73
LMNB1-208ENST00000504788 FGF23Q9GZV9 251 aaPredicted RBP4.22□□□□□ -1.73
LMNB1-208ENST00000504788 PBOV1Q9GZY1 135 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 KCNN2Q9H2S1 579 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 ZNF696Q9H7X3 374 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 ACOT13Q9NPJ3 140 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 CENPMQ9NSP4 180 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 CISD1Q9NZ45 108 aaKnown RBP4.22□□□□□ -1.73
LMNB1-208ENST00000504788 SLC22A13Q9Y226 551 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 R4GMQ9 66 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 CCDC168Q8NDH2 2452 aa4.22□□□□□ -1.73
LMNB1-208ENST00000504788 NOTCH2Q04721 2471 aa4.21□□□□□ -1.73
LMNB1-208ENST00000504788 TMEM269A0A1B0GVZ9 245 aa4.21□□□□□ -1.74
LMNB1-208ENST00000504788 LOC390937A0A1W2PQ73 354 aa4.21□□□□□ -1.74
LMNB1-208ENST00000504788 DAPL1A0PJW8 107 aa4.21□□□□□ -1.74
LMNB1-208ENST00000504788 ZSCAN5BA6NJL1 495 aa4.21□□□□□ -1.74
LMNB1-208ENST00000504788 POM121CA8CG34 1229 aa4.21□□□□□ -1.74
LMNB1-208ENST00000504788 IQCF6A8MYZ5 107 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms