RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 SGK3Q96BR1 496 aa17.6■□□□□ 0.41
CDC42SE2-206ENST00000503291 OR10A2Q9H208 303 aa17.6■□□□□ 0.41
CDC42SE2-206ENST00000503291 DEFB108AA8MXU0 73 aa17.59■□□□□ 0.41
CDC42SE2-206ENST00000503291 LIPAP38571 399 aa17.59■□□□□ 0.41
CDC42SE2-206ENST00000503291 GPR50Q13585 617 aa17.59■□□□□ 0.41
CDC42SE2-206ENST00000503291 SLC22A25Q6T423 547 aa17.59■□□□□ 0.41
CDC42SE2-206ENST00000503291 UNQ6126/PRO20091Q6UXV3 157 aa17.59■□□□□ 0.41
CDC42SE2-206ENST00000503291 PHC2Q8IXK0 858 aa17.59■□□□□ 0.41
CDC42SE2-206ENST00000503291 ZNF676Q8N7Q3 588 aa17.59■□□□□ 0.41
CDC42SE2-206ENST00000503291 OR5AK2Q8NH90 309 aa17.59■□□□□ 0.41
CDC42SE2-206ENST00000503291 PGLYRP3Q96LB9 341 aa17.59■□□□□ 0.41
CDC42SE2-206ENST00000503291 SLC24A3Q9HC58 644 aa17.59■□□□□ 0.41
CDC42SE2-206ENST00000503291 UTP20O75691 2785 aaKnown RBP17.59■□□□□ 0.41
CDC42SE2-206ENST00000503291 TMEM212A6NML5 194 aa17.59■□□□□ 0.41
CDC42SE2-206ENST00000503291 J3QW42 95 aa17.59■□□□□ 0.41
CDC42SE2-206ENST00000503291 NR4A1P22736 598 aa17.59■□□□□ 0.41
CDC42SE2-206ENST00000503291 SSX1Q16384 188 aa17.59■□□□□ 0.41
CDC42SE2-206ENST00000503291 GFOD2Q3B7J2 385 aa17.59■□□□□ 0.41
CDC42SE2-206ENST00000503291 ZNF704Q6ZNC4 412 aaPredicted RBP17.59■□□□□ 0.41
CDC42SE2-206ENST00000503291 OR5L1Q8NGL2 311 aa17.59■□□□□ 0.41
CDC42SE2-206ENST00000503291 OR1J1Q8NGS3 322 aa17.59■□□□□ 0.41
CDC42SE2-206ENST00000503291 OR2AE1Q8NHA4 323 aa17.59■□□□□ 0.41
CDC42SE2-206ENST00000503291 OR51E1Q8TCB6 317 aa17.59■□□□□ 0.41
CDC42SE2-206ENST00000503291 TMIGD2Q96BF3 282 aa17.59■□□□□ 0.41
CDC42SE2-206ENST00000503291 A0A0U1RQV5 110 aa17.58■□□□□ 0.4
CDC42SE2-206ENST00000503291 ATE1O95260 518 aa17.58■□□□□ 0.4
CDC42SE2-206ENST00000503291 ALDH3B2P48448 385 aa17.58■□□□□ 0.4
CDC42SE2-206ENST00000503291 PPP1CBP62140 327 aa17.58■□□□□ 0.4
CDC42SE2-206ENST00000503291 GLYATL3Q5SZD4 288 aa17.58■□□□□ 0.4
CDC42SE2-206ENST00000503291 BCL2L14Q9BZR8 327 aa17.58■□□□□ 0.4
CDC42SE2-206ENST00000503291 COMMD4Q9H0A8 199 aa17.58■□□□□ 0.4
CDC42SE2-206ENST00000503291 SPEF1Q9Y4P9 236 aa17.58■□□□□ 0.4
CDC42SE2-206ENST00000503291 P2RY10O00398 339 aa17.57■□□□□ 0.4
CDC42SE2-206ENST00000503291 CD3EP07766 207 aa17.57■□□□□ 0.4
CDC42SE2-206ENST00000503291 RPL5P46777 297 aaKnown RBP17.57■□□□□ 0.4
CDC42SE2-206ENST00000503291 ERVS71-1P61550 626 aa17.57■□□□□ 0.4
CDC42SE2-206ENST00000503291 ZNF92Q03936 586 aa17.57■□□□□ 0.4
CDC42SE2-206ENST00000503291 MALLQ13021 153 aa17.57■□□□□ 0.4
CDC42SE2-206ENST00000503291 ADAM5Q6NVV9 412 aa17.57■□□□□ 0.4
CDC42SE2-206ENST00000503291 PIK3IP1Q96FE7 263 aa17.57■□□□□ 0.4
CDC42SE2-206ENST00000503291 SPOCK3Q9BQ16 436 aa17.57■□□□□ 0.4
CDC42SE2-206ENST00000503291 POFUT1Q9H488 388 aa17.57■□□□□ 0.4
CDC42SE2-206ENST00000503291 GPR84Q9NQS5 396 aa17.57■□□□□ 0.4
CDC42SE2-206ENST00000503291 H3BSH0 61 aa17.57■□□□□ 0.4
CDC42SE2-206ENST00000503291 CCRL2O00421 344 aa17.57■□□□□ 0.4
CDC42SE2-206ENST00000503291 XRCC2O43543 280 aa17.57■□□□□ 0.4
CDC42SE2-206ENST00000503291 ISG15P05161 165 aa17.57■□□□□ 0.4
CDC42SE2-206ENST00000503291 CD1AP06126 327 aa17.57■□□□□ 0.4
CDC42SE2-206ENST00000503291 UBCP0CG48 685 aaKnown RBP17.57■□□□□ 0.4
CDC42SE2-206ENST00000503291 NKX6-1P78426 367 aaPredicted RBP17.57■□□□□ 0.4
CDC42SE2-206ENST00000503291 SNTB2Q13425 540 aaKnown RBP17.57■□□□□ 0.4
CDC42SE2-206ENST00000503291 SPATA46Q5T0L3 261 aa17.57■□□□□ 0.4
CDC42SE2-206ENST00000503291 REEP6Q96HR9 211 aa17.57■□□□□ 0.4
CDC42SE2-206ENST00000503291 LYZL4Q96KX0 146 aa17.57■□□□□ 0.4
CDC42SE2-206ENST00000503291 HS3ST6Q96QI5 342 aa17.57■□□□□ 0.4
CDC42SE2-206ENST00000503291 OR2J1Q9GZK6 312 aa17.57■□□□□ 0.4
CDC42SE2-206ENST00000503291 PTTG3PQ9NZH4 202 aa17.57■□□□□ 0.4
CDC42SE2-206ENST00000503291 ZNF281Q9Y2X9 895 aa17.57■□□□□ 0.4
CDC42SE2-206ENST00000503291 A0A1B0GTI1 187 aa17.56■□□□□ 0.4
CDC42SE2-206ENST00000503291 IGLV3-1P01715 115 aa17.56■□□□□ 0.4
CDC42SE2-206ENST00000503291 GK2Q14410 553 aaPredicted RBP17.56■□□□□ 0.4
CDC42SE2-206ENST00000503291 TMEM244Q5VVB8 128 aa17.56■□□□□ 0.4
CDC42SE2-206ENST00000503291 COMMD2Q86X83 199 aa17.56■□□□□ 0.4
CDC42SE2-206ENST00000503291 TMEM203Q969S6 136 aa17.56■□□□□ 0.4
CDC42SE2-206ENST00000503291 SOX7Q9BT81 388 aa17.56■□□□□ 0.4
CDC42SE2-206ENST00000503291 TMED9Q9BVK6 235 aa17.56■□□□□ 0.4
CDC42SE2-206ENST00000503291 RGCCQ9H4X1 137 aa17.56■□□□□ 0.4
CDC42SE2-206ENST00000503291 SF3B6Q9Y3B4 125 aaKnown RBP17.56■□□□□ 0.4
CDC42SE2-206ENST00000503291 SHISA9B4DS77 424 aa17.55■□□□□ 0.4
CDC42SE2-206ENST00000503291 GPRIN2O60269 458 aa17.55■□□□□ 0.4
CDC42SE2-206ENST00000503291 LOXP28300 417 aaPredicted RBP17.55■□□□□ 0.4
CDC42SE2-206ENST00000503291 GLRXP35754 106 aa17.55■□□□□ 0.4
CDC42SE2-206ENST00000503291 HLXQ14774 488 aaPredicted RBP17.55■□□□□ 0.4
CDC42SE2-206ENST00000503291 DAZAP2Q15038 168 aaPredicted RBP17.55■□□□□ 0.4
CDC42SE2-206ENST00000503291 SP5Q6BEB4 398 aaPredicted RBP17.55■□□□□ 0.4
CDC42SE2-206ENST00000503291 C1orf174Q8IYL3 243 aa17.55■□□□□ 0.4
CDC42SE2-206ENST00000503291 OR13F1Q8NGS4 319 aa17.55■□□□□ 0.4
CDC42SE2-206ENST00000503291 OR10AC1Q8NH08 325 aa17.55■□□□□ 0.4
CDC42SE2-206ENST00000503291 SLC25A40Q8TBP6 338 aa17.55■□□□□ 0.4
CDC42SE2-206ENST00000503291 SPSB4Q96A44 273 aa17.55■□□□□ 0.4
CDC42SE2-206ENST00000503291 NDUFB11Q9NX14 153 aa17.55■□□□□ 0.4
CDC42SE2-206ENST00000503291 RNF115Q9Y4L5 304 aa17.55■□□□□ 0.4
CDC42SE2-206ENST00000503291 PRSS12P56730 875 aa17.55■□□□□ 0.4
CDC42SE2-206ENST00000503291 NUP37Q8NFH4 326 aa17.55■□□□□ 0.4
CDC42SE2-206ENST00000503291 OR51A4Q8NGJ6 313 aa17.55■□□□□ 0.4
CDC42SE2-206ENST00000503291 OR13C5Q8NGS8 318 aa17.55■□□□□ 0.4
CDC42SE2-206ENST00000503291 RGP1Q92546 391 aaPredicted RBP17.55■□□□□ 0.4
CDC42SE2-206ENST00000503291 MARS2Q96GW9 593 aaKnown RBP17.55■□□□□ 0.4
CDC42SE2-206ENST00000503291 REPIN1Q9BWE0 567 aaKnown RBP17.55■□□□□ 0.4
CDC42SE2-206ENST00000503291 ZNF391Q9UJN7 358 aa17.55■□□□□ 0.4
CDC42SE2-206ENST00000503291 POU2F3Q9UKI9 436 aa17.55■□□□□ 0.4
CDC42SE2-206ENST00000503291 HHLA2Q9UM44 414 aa17.55■□□□□ 0.4
CDC42SE2-206ENST00000503291 ATP23Q9Y6H3 246 aa17.55■□□□□ 0.4
CDC42SE2-206ENST00000503291 GCN1Q92616 2671 aaKnown RBP17.55■□□□□ 0.4
CDC42SE2-206ENST00000503291 LOC107986453A0A1B0GWG9 222 aa17.54■□□□□ 0.4
CDC42SE2-206ENST00000503291 SYT7O43581 403 aa17.54■□□□□ 0.4
CDC42SE2-206ENST00000503291 PLAUP00749 431 aa17.54■□□□□ 0.4
CDC42SE2-206ENST00000503291 CD36P16671 472 aa17.54■□□□□ 0.4
CDC42SE2-206ENST00000503291 CD53P19397 219 aa17.54■□□□□ 0.4
CDC42SE2-206ENST00000503291 RPS11P62280 158 aaKnown RBP eCLIP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms