RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 SAMD4AQ9UPU9 718 aaKnown RBP3.92□□□□□ -1.78
NIPBL-203ENST00000503274 CHMP2BQ9UQN3 213 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 SLC22A14Q9Y267 594 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 YARS2Q9Y2Z4 477 aaKnown RBP3.92□□□□□ -1.78
NIPBL-203ENST00000503274 OARD1Q9Y530 152 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 PPIAL4AQ9Y536 164 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 SAR1BQ9Y6B6 198 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 CLCA3PQ9Y6N3 262 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 DNAJC13O75165 2243 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 F8P00451 2351 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 ITPR3Q14573 2671 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 AKAP9Q99996 3911 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 ZFHX3Q15911 3703 aa3.92□□□□□ -1.78
NIPBL-203ENST00000503274 CACNA1CQ13936 2221 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 ANKHD1Q8IWZ3 2542 aaKnown RBP3.91□□□□□ -1.78
NIPBL-203ENST00000503274 TRBV11-1A0A0K0K1C0 115 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 A8MUA0 341 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 B4DXG7 233 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 ERI3O43414 337 aaKnown RBP3.91□□□□□ -1.78
NIPBL-203ENST00000503274 LYPLA1O75608 230 aaPredicted RBP3.91□□□□□ -1.78
NIPBL-203ENST00000503274 STK16O75716 305 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 MYO1DO94832 1006 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 TNNI3P19429 210 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 SERPINB1P30740 379 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 ASMTP46597 345 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 SSR4P51571 173 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 EFNA3P52797 238 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 MTTPP55157 894 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 WNT4P56705 351 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 MLF1P58340 268 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 ATP6V0D1P61421 351 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 GNG11P61952 73 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 RPL8P62917 257 aaKnown RBP3.91□□□□□ -1.78
NIPBL-203ENST00000503274 VLDLRP98155 873 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 REEP5Q00765 189 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 PLGLB1Q02325 96 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 STX4Q12846 297 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 PDIA2Q13087 525 aaKnown RBP3.91□□□□□ -1.78
NIPBL-203ENST00000503274 CAPRIN1Q14444 709 aaKnown RBP3.91□□□□□ -1.78
NIPBL-203ENST00000503274 TOR1AIP1Q5JTV8 583 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 SPATA46Q5T0L3 261 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 OTPQ5XKR4 325 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 STEAP4Q687X5 459 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 SULT1C3Q6IMI6 304 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 SBSNQ6UWP8 590 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 Q6ZPB1 254 aaPredicted RBP3.91□□□□□ -1.78
NIPBL-203ENST00000503274 CYS1Q717R9 158 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 LRRC70Q7Z2Q7 622 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 TMEM179BQ7Z7N9 219 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 TGIF2LYQ8IUE0 185 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 CYP4Z2PQ8N1L4 340 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 INTS1Q8N201 2190 aaKnown RBP3.91□□□□□ -1.78
NIPBL-203ENST00000503274 ZSCAN4Q8NAM6 433 aaPredicted RBP3.91□□□□□ -1.78
NIPBL-203ENST00000503274 B3GNT7Q8NFL0 401 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 OR10H4Q8NGA5 316 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 OR5T3Q8NGG3 340 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 OR5L2Q8NGL0 311 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 PYROXD1Q8WU10 500 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 PHF10Q8WUB8 498 aaKnown RBP3.91□□□□□ -1.78
NIPBL-203ENST00000503274 TSLPQ969D9 159 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 CAPZA3Q96KX2 299 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 NOL4LQ96MY1 436 aaPredicted RBP3.91□□□□□ -1.78
NIPBL-203ENST00000503274 FAM111AQ96PZ2 611 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 OR4K3Q96R72 315 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 NAPGQ99747 312 aaPredicted RBP3.91□□□□□ -1.78
NIPBL-203ENST00000503274 EFCAB11Q9BUY7 163 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 DERL2Q9GZP9 239 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 RHOJQ9H4E5 214 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 TRIM45Q9H8W5 580 aaPredicted RBP3.91□□□□□ -1.78
NIPBL-203ENST00000503274 ADAP2Q9NPF8 381 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 PRTFDC1Q9NRG1 225 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.91□□□□□ -1.78
NIPBL-203ENST00000503274 HPF1Q9NWY4 346 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 NINJ2Q9NZG7 142 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 SPRR3Q9UBC9 169 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 ATP6V1HQ9UI12 483 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 ZNF835Q9Y2P0 537 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 MEMO1Q9Y316 297 aa3.91□□□□□ -1.78
NIPBL-203ENST00000503274 NF1P21359 2839 aa3.9□□□□□ -1.78
NIPBL-203ENST00000503274 CPAMD8Q8IZJ3 1885 aa3.9□□□□□ -1.78
NIPBL-203ENST00000503274 ZNF407Q9C0G0 2248 aa3.9□□□□□ -1.78
NIPBL-203ENST00000503274 IGKV3D-11A0A0A0MRZ8 115 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 FAM230AA0A1W2PPH8 454 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 WI2-2373I1.2A0A1W2PRP0 233 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 NCF1BA6NI72 391 aaPredicted RBP3.9□□□□□ -1.79
NIPBL-203ENST00000503274 LRRC30A6NM36 301 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 SYCE1LA8MT33 242 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 NCF1CA8MVU1 366 aaPredicted RBP3.9□□□□□ -1.79
NIPBL-203ENST00000503274 CDC7O00311 574 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 EIF3HO15372 352 aaKnown RBP eCLIP3.9□□□□□ -1.79
NIPBL-203ENST00000503274 CDC40O60508 579 aaKnown RBP eCLIP3.9□□□□□ -1.79
NIPBL-203ENST00000503274 CTNSO60931 367 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 BANF1O75531 89 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 IGLV1-47P01700 117 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 SMIM10L1P0DMW3 83 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 NCF1P14598 390 aaPredicted RBP3.9□□□□□ -1.79
NIPBL-203ENST00000503274 CRABP2P29373 138 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 PLA2G16P53816 162 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 RAB38P57729 211 aa3.9□□□□□ -1.79
NIPBL-203ENST00000503274 TAS2R39P59534 338 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms