RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 GJE1A6NN92 205 aa15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 HOXD4P09016 255 aaPredicted RBP15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 HSD17B7P56937 341 aa15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 RUNX2Q13950 521 aa15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 PRSS54Q6PEW0 395 aa15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 H1FNTQ75WM6 255 aaPredicted RBP15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 ZNF100Q8IYN0 542 aa15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 ARHGEF39Q8N4T4 335 aa15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 SECTM1Q8WVN6 248 aa15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 ASH2LQ9UBL3 628 aa15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 LOC102725191A0A1B0GVB3 256 aa15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 BTBD17A6NE02 478 aa15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 GP1BAP07359 652 aa15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 DPP4P27487 766 aa15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 SMAD2Q15796 467 aaKnown RBP15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 PNLIPRP3Q17RR3 467 aa15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 ING1Q9UK53 422 aaPredicted RBP15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 NXT1Q9UKK6 140 aaKnown RBP15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 MFAP5Q13361 173 aa15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 LAMTOR1Q6IAA8 161 aa15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 ABHD6Q9BV23 337 aa15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 MIOXQ9UGB7 285 aa15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 GRB2P62993 217 aaKnown RBP15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 MIDNQ504T8 468 aa15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 PLCXD3Q63HM9 321 aa15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 PPP1R3BQ86XI6 285 aa15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 FAM24BQ8N5W8 94 aa15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 SLAMF6Q96DU3 332 aa15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 TVP23CQ96ET8 276 aa15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 TMEM100Q9NV29 134 aa15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 THAP10Q9P2Z0 257 aaPredicted RBP15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 B9D1Q9UPM9 204 aa15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 POLR2AP24928 1970 aaKnown RBP15.56■□□□□ 0.08
HMGXB3-201ENST00000502717 PLSCR5A0PG75 271 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 IDSB3KWA1 339 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 ABCD3P28288 659 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 CD96P40200 585 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 YPEL5P62699 121 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 CPEB2Q7Z5Q1 589 aaKnown RBP15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 AKR7LQ8NHP1 331 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 PIGQQ9BRB3 760 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 TEX101Q9BY14 249 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 AADACP22760 399 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 LSM11P83369 360 aaKnown RBP eCLIP15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 RAB31Q13636 194 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 WDR38Q5JTN6 314 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 MKXQ8IYA7 352 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 SUMF1Q8NBK3 374 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 OR10D4PQ8NGN7 298 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 HPSE2Q8WWQ2 592 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 EDEM2Q9BV94 578 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 ALX4Q9H161 411 aaPredicted RBP15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 TXNIPQ9H3M7 391 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 SEMA6CQ9H3T2 930 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 PATZ1Q9HBE1 687 aaKnown RBP15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 H7BYZ3 331 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 MSMO1Q15800 293 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 OR11G2Q8NGC1 345 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 ANKRD9Q96BM1 317 aaPredicted RBP15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 CABLES2Q9BTV7 478 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 MMACHCQ9Y4U1 282 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 ZNFX1Q9P2E3 1918 aaKnown RBP15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 SHISA7A6NL88 538 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 CEBPZOSA8MTT3 80 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 PHOX2AO14813 284 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 ANKRD34CP0C6C1 535 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 PSMB3P49720 205 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 AGFG1P52594 562 aaKnown RBP15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 C17orf67Q0P5P2 114 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 DCAF12Q5T6F0 453 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 SLC38A9Q8NBW4 561 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 OR51E1Q8TCB6 317 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 NT5CQ8TCD5 201 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 PLEKHA3Q9HB20 300 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 PTRH2Q9Y3E5 179 aaKnown RBP15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 SIRT4Q9Y6E7 314 aaPredicted RBP15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 MIA3Q5JRA6 1907 aa15.55■□□□□ 0.08
HMGXB3-201ENST00000502717 FPR2P25090 351 aa15.54■□□□□ 0.08
HMGXB3-201ENST00000502717 FASLGP48023 281 aa15.54■□□□□ 0.08
HMGXB3-201ENST00000502717 CDKN3Q16667 212 aa15.54■□□□□ 0.08
HMGXB3-201ENST00000502717 MOB3CQ70IA8 216 aa15.54■□□□□ 0.08
HMGXB3-201ENST00000502717 OR5L1Q8NGL2 311 aa15.54■□□□□ 0.08
HMGXB3-201ENST00000502717 LAT2Q9GZY6 243 aa15.54■□□□□ 0.08
HMGXB3-201ENST00000502717 KCNJ3P48549 501 aa15.54■□□□□ 0.08
HMGXB3-201ENST00000502717 GREB1LQ9C091 1923 aaPredicted RBP15.54■□□□□ 0.08
HMGXB3-201ENST00000502717 SFT2D2O95562 160 aa15.54■□□□□ 0.08
HMGXB3-201ENST00000502717 MYOGP15173 224 aa15.54■□□□□ 0.08
HMGXB3-201ENST00000502717 TCN2P20062 427 aa15.54■□□□□ 0.08
HMGXB3-201ENST00000502717 SLC35B3Q9H1N7 401 aa15.54■□□□□ 0.08
HMGXB3-201ENST00000502717 CUTCQ9NTM9 273 aa15.54■□□□□ 0.08
HMGXB3-201ENST00000502717 APC2O95996 2303 aa15.54■□□□□ 0.08
HMGXB3-201ENST00000502717 SRFP11831 508 aa15.54■□□□□ 0.08
HMGXB3-201ENST00000502717 BTG2P78543 158 aa15.54■□□□□ 0.08
HMGXB3-201ENST00000502717 ATPAF1Q5TC12 328 aaPredicted RBP15.54■□□□□ 0.08
HMGXB3-201ENST00000502717 ZNF660Q6AZW8 331 aaPredicted RBP15.54■□□□□ 0.08
HMGXB3-201ENST00000502717 UBAC2Q8NBM4 344 aa15.54■□□□□ 0.08
HMGXB3-201ENST00000502717 SCAF4O95104 1147 aaKnown RBP15.53■□□□□ 0.08
HMGXB3-201ENST00000502717 CA13Q8N1Q1 262 aa15.53■□□□□ 0.08
HMGXB3-201ENST00000502717 ULBP2Q9BZM5 246 aa15.53■□□□□ 0.08
HMGXB3-201ENST00000502717 TBC1D29Q9UFV1 150 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms